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The map label for this gene is 116332600

Identifier: 116332600

GI number: 116332600

Start: 199282

End: 200892

Strand: Reverse

Name: 116332600

Synonym: LBJ_4172

Alternate gene names: NA

Gene position: 200892-199282 (Counterclockwise)

Preceding gene: 116332601

Following gene: 116332599

Centisome position: 67.02

GC content: 44.57

Gene sequence:

>1611_bases
ATGAGCCAAAATAAATTCAAATGGTTTGTGCCGGGAGATTTAGACGGATTTTTCGGTCTAATGATCGACAATCTGATTCA
GATTCTCGTTCTTTCTTTTTTGTTAACTACCCTTTGCGGCGTTCCGAGCGAATTTGTATATAAAGTGATTCTTCCAGGAA
CGGCGATTTCTCTTCTACTTGGAAATCTGTTTTATTCCTGGCAGGCGCATCGTCTCGCCCGGAAAGAAAACAGATCCGAC
GTCACCGCTCTTCCGTACGGAATCAATACGGTTTCCTTATTTGCATTTACGTTCTTTATTATACTTCCCGTATATAAGAA
AACCGGCGATTACAGAATGGCTTGGCAGGTAGGGCTCATGGCGAGTTTCCTTTCGGGTTTGATTGAAATGTCCGGTTCCT
TTGTGGCGGAAAAGATTCGAAAAGTGACTCCAAGGGCCGCGCTTCTTTCCTCGCTTGCGGGGATCGCGATTACGTTTATC
TCCATGGACTTTTTAGTCCGCACCTTTCAAAATTCTCTGATTGCGTTTCTTCCTTTCGGAGTGATTCTATTGCAGTATTT
TGCAAGAGTTGTGTTTCCGTTTCGTCTTCCGGGTGGATTTGTATCCGTCGTCTTGGGGACCTTGCTTGCTTGGTCAGCGG
GAGCCTGGGGAAATCCGATTATGGATGCGGACTTGCTCAAGGGGGCCACGAATCACATCGGATTTTACTTCCCCACTTTG
TGCGTACATGATTTATTCACCGCGTTTCAATTTGCGGATATGAGAGAATATCTTGCGGTTCTGATTCCGATGGGAATTTT
TAACGTAATCGGTTCTTTACAAAATATAGAATCTGCGGAAGCTTCCGGGGATTCTTTCAACACAAGAGATTCTCTTCTTG
CAAACGGAGTTGGAACCGTAGTCGGGTCTTTTTTCGGATCTCCATTCCCGACCACGATTTATATCGGTCATCCGGGTTGG
AAAGCTTTGGGCGCCAGGGCCGGTTACTCTACTCTGAACGGAGTTTTCATGACGATCGTTGCTTTGTTCGGACTTCTCGC
TTTTATTCAAGCATTAATTCCTGTGGAAGCGGGAATGGCGATCGTACTTTGGATCGGAATTGTGATCGGTTCTCAGGCAT
TTGAAGCGACTCCGAGCAGGCACGCTCCCGCTGTTATTATCGGGATTTTACCGGCGCTTGCGGGTTGGGGAATTTTACTG
ATTCAGTCTACATTCAATTATGCGGATCGATTAATCGTGGAAATTCTGGAAAATGCAGGAGTGAAAGAGACTGCACATCT
ATGGATGTCCGATGTCCCTCTTTCCCTTCCGTTTTTACCTTACCCTTTGGGAGGGCTTTTGAGTTTATCTCAAGGATTTT
TGATTTCTTCTATGATCTGGGCTTCGATTGCGGTTTTTGTCATCGATCGGAATTTTAAAAAGGCTTTGATTGTTTGTTTC
GTCGCGGCTGTTCTCGCATCCACCGGATTCATACACGGTTTTTCACTTCGAGGAAATGATGTTATCAGTCAGTTCGAACC
GAGTATGAATTTTTTCGTAACCAGCTATATGCTCCTCGGAATTTTATTTTTATTAGCTTCTTTTTTTCGAAAGGAAACGC
GAAAGGTATAA

Upstream 100 bases:

>100_bases
CACTCGGAGAAAAAACAACTTTAGTGAAAAAAAAAGAAGGTGATGTAAAAGGCGATCAGTCCAACGTGATTCAAGTGGAT
TTCGGGAGTAAATCGAAACA

Downstream 100 bases:

>100_bases
AAGGATAAGTTTGGGGCGTTTCGGATCAAAAAATTGATGAAATGTGTGCTGGGTTTCGAGTCGCATTTGAAAAAAACTCA
AACAGAACGCTTCCTATGGG

Product: permease

Products: NA

Alternate protein names: Permease; MFS Transporter Xanthine/Uracil Permease; Permease Subfamily Putative; Sulphate Transporter; Regulator; Transcriptional Regulator; Permease Subfamily

Number of amino acids: Translated: 536; Mature: 535

Protein sequence:

>536_residues
MSQNKFKWFVPGDLDGFFGLMIDNLIQILVLSFLLTTLCGVPSEFVYKVILPGTAISLLLGNLFYSWQAHRLARKENRSD
VTALPYGINTVSLFAFTFFIILPVYKKTGDYRMAWQVGLMASFLSGLIEMSGSFVAEKIRKVTPRAALLSSLAGIAITFI
SMDFLVRTFQNSLIAFLPFGVILLQYFARVVFPFRLPGGFVSVVLGTLLAWSAGAWGNPIMDADLLKGATNHIGFYFPTL
CVHDLFTAFQFADMREYLAVLIPMGIFNVIGSLQNIESAEASGDSFNTRDSLLANGVGTVVGSFFGSPFPTTIYIGHPGW
KALGARAGYSTLNGVFMTIVALFGLLAFIQALIPVEAGMAIVLWIGIVIGSQAFEATPSRHAPAVIIGILPALAGWGILL
IQSTFNYADRLIVEILENAGVKETAHLWMSDVPLSLPFLPYPLGGLLSLSQGFLISSMIWASIAVFVIDRNFKKALIVCF
VAAVLASTGFIHGFSLRGNDVISQFEPSMNFFVTSYMLLGILFLLASFFRKETRKV

Sequences:

>Translated_536_residues
MSQNKFKWFVPGDLDGFFGLMIDNLIQILVLSFLLTTLCGVPSEFVYKVILPGTAISLLLGNLFYSWQAHRLARKENRSD
VTALPYGINTVSLFAFTFFIILPVYKKTGDYRMAWQVGLMASFLSGLIEMSGSFVAEKIRKVTPRAALLSSLAGIAITFI
SMDFLVRTFQNSLIAFLPFGVILLQYFARVVFPFRLPGGFVSVVLGTLLAWSAGAWGNPIMDADLLKGATNHIGFYFPTL
CVHDLFTAFQFADMREYLAVLIPMGIFNVIGSLQNIESAEASGDSFNTRDSLLANGVGTVVGSFFGSPFPTTIYIGHPGW
KALGARAGYSTLNGVFMTIVALFGLLAFIQALIPVEAGMAIVLWIGIVIGSQAFEATPSRHAPAVIIGILPALAGWGILL
IQSTFNYADRLIVEILENAGVKETAHLWMSDVPLSLPFLPYPLGGLLSLSQGFLISSMIWASIAVFVIDRNFKKALIVCF
VAAVLASTGFIHGFSLRGNDVISQFEPSMNFFVTSYMLLGILFLLASFFRKETRKV
>Mature_535_residues
SQNKFKWFVPGDLDGFFGLMIDNLIQILVLSFLLTTLCGVPSEFVYKVILPGTAISLLLGNLFYSWQAHRLARKENRSDV
TALPYGINTVSLFAFTFFIILPVYKKTGDYRMAWQVGLMASFLSGLIEMSGSFVAEKIRKVTPRAALLSSLAGIAITFIS
MDFLVRTFQNSLIAFLPFGVILLQYFARVVFPFRLPGGFVSVVLGTLLAWSAGAWGNPIMDADLLKGATNHIGFYFPTLC
VHDLFTAFQFADMREYLAVLIPMGIFNVIGSLQNIESAEASGDSFNTRDSLLANGVGTVVGSFFGSPFPTTIYIGHPGWK
ALGARAGYSTLNGVFMTIVALFGLLAFIQALIPVEAGMAIVLWIGIVIGSQAFEATPSRHAPAVIIGILPALAGWGILLI
QSTFNYADRLIVEILENAGVKETAHLWMSDVPLSLPFLPYPLGGLLSLSQGFLISSMIWASIAVFVIDRNFKKALIVCFV
AAVLASTGFIHGFSLRGNDVISQFEPSMNFFVTSYMLLGILFLLASFFRKETRKV

Specific function: Unknown

COG id: COG2252

COG function: function code R; Permeases

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 58586; Mature: 58455

Theoretical pI: Translated: 8.71; Mature: 8.71

Prosite motif: PS00626 RCC1_2

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.6 %Cys     (Translated Protein)
2.8 %Met     (Translated Protein)
3.4 %Cys+Met (Translated Protein)
0.6 %Cys     (Mature Protein)
2.6 %Met     (Mature Protein)
3.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure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HHHHHHHCCCEEEECCCCCHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCC
>Mature Secondary Structure 
SQNKFKWFVPGDLDGFFGLMIDNLIQILVLSFLLTTLCGVPSEFVYKVILPGTAISLLL
CCCCEEEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHCCCHHHHHHH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HHHHHHHCCCEEEECCCCCHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA