Click here to switch to the map view.

The map label for this gene is 116332557

Identifier: 116332557

GI number: 116332557

Start: 141547

End: 142080

Strand: Reverse

Name: 116332557

Synonym: LBJ_4123

Alternate gene names: NA

Gene position: 142080-141547 (Counterclockwise)

Preceding gene: 116332558

Following gene: 116332556

Centisome position: 47.4

GC content: 41.39

Gene sequence:

>534_bases
ATGGCCAGAACGCCAAAAAAAGAAAATAAGAATCTTATCATTGGGTTTTTAACGATCTTAATCTTTTCCGTTCTCGGAAA
TTGTATGGGAGCTACCTTATTCAAACCGGGCGGACGTGTGCGTTCGCCGGCTCTTTATGATTCAGCAACGATTATACGAA
CTTCTGAATATGATATTTTAGAAAAAGAGTCAGAGGGTGAGTCTTCAACATTTTTTATCTTTGGGCTCATTCCAATCACA
AATCCGATTAGTATCGACTATGCGCTCAGCCAAGCGGTTCAAAAAGTTCCGGGAGGAAGGAGTCTTATAAATATTAAAGT
TTGGCACGAAACGCATGTCATGTTTCCTCTTGGAACCGTTTCCGTTTTGAAGGTCAAAGGTAGCGTCATCGGAAACAAAG
AGGAAGCGGAAAGAGAAAAACTCAGGTTAGAATTACAAAAGAAAGACGCCGCCCCTCCCCCTCCAAAAGATCAAAAACAA
AATCCGACTCTTGAGTCCGGAGGAATTTCCGTGGGAGGCAATAAAAAGAATTAA

Upstream 100 bases:

>100_bases
ATTAATATCCGTTATTGGACGGATAAATACATTTTTCTTTTCCTCACCGTCAATAGGCTCCATATCAATGCGGAAGCGAT
CAAATTCGAGGATCAACTCA

Downstream 100 bases:

>100_bases
TATGTTAGAATATTCTTCAGTAGAAAATAAAAAGAATACCTTCGGACAAAGACCGATATTTTTGCAACGTATCGTTTTGA
GACTTGTTTCTATTTTGGTA

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 177; Mature: 176

Protein sequence:

>177_residues
MARTPKKENKNLIIGFLTILIFSVLGNCMGATLFKPGGRVRSPALYDSATIIRTSEYDILEKESEGESSTFFIFGLIPIT
NPISIDYALSQAVQKVPGGRSLINIKVWHETHVMFPLGTVSVLKVKGSVIGNKEEAEREKLRLELQKKDAAPPPPKDQKQ
NPTLESGGISVGGNKKN

Sequences:

>Translated_177_residues
MARTPKKENKNLIIGFLTILIFSVLGNCMGATLFKPGGRVRSPALYDSATIIRTSEYDILEKESEGESSTFFIFGLIPIT
NPISIDYALSQAVQKVPGGRSLINIKVWHETHVMFPLGTVSVLKVKGSVIGNKEEAEREKLRLELQKKDAAPPPPKDQKQ
NPTLESGGISVGGNKKN
>Mature_176_residues
ARTPKKENKNLIIGFLTILIFSVLGNCMGATLFKPGGRVRSPALYDSATIIRTSEYDILEKESEGESSTFFIFGLIPITN
PISIDYALSQAVQKVPGGRSLINIKVWHETHVMFPLGTVSVLKVKGSVIGNKEEAEREKLRLELQKKDAAPPPPKDQKQN
PTLESGGISVGGNKKN

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 19349; Mature: 19217

Theoretical pI: Translated: 10.06; Mature: 10.06

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.6 %Cys     (Translated Protein)
1.7 %Met     (Translated Protein)
2.3 %Cys+Met (Translated Protein)
0.6 %Cys     (Mature Protein)
1.1 %Met     (Mature Protein)
1.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MARTPKKENKNLIIGFLTILIFSVLGNCMGATLFKPGGRVRSPALYDSATIIRTSEYDIL
CCCCCCCCCCCEEHHHHHHHHHHHHHHHHCCEEECCCCCCCCCCEECCEEEEEECCCCEE
EKESEGESSTFFIFGLIPITNPISIDYALSQAVQKVPGGRSLINIKVWHETHVMFPLGTV
CCCCCCCCCEEEEEEEEECCCCCCHHHHHHHHHHHCCCCCEEEEEEEEECEEEEEECCCE
SVLKVKGSVIGNKEEAEREKLRLELQKKDAAPPPPKDQKQNPTLESGGISVGGNKKN
EEEEEECCCCCCHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCEECCCCCCC
>Mature Secondary Structure 
ARTPKKENKNLIIGFLTILIFSVLGNCMGATLFKPGGRVRSPALYDSATIIRTSEYDIL
CCCCCCCCCCEEHHHHHHHHHHHHHHHHCCEEECCCCCCCCCCEECCEEEEEECCCCEE
EKESEGESSTFFIFGLIPITNPISIDYALSQAVQKVPGGRSLINIKVWHETHVMFPLGTV
CCCCCCCCCEEEEEEEEECCCCCCHHHHHHHHHHHCCCCCEEEEEEEEECEEEEEECCCE
SVLKVKGSVIGNKEEAEREKLRLELQKKDAAPPPPKDQKQNPTLESGGISVGGNKKN
EEEEEECCCCCCHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCEECCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA