| Definition | Leptospira borgpetersenii serovar Hardjo-bovis JB197 chromosome 2, complete sequence. |
|---|---|
| Accession | NC_008511 |
| Length | 299,762 |
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The map label for this gene is 116332512
Identifier: 116332512
GI number: 116332512
Start: 78928
End: 79500
Strand: Direct
Name: 116332512
Synonym: LBJ_4070
Alternate gene names: NA
Gene position: 78928-79500 (Clockwise)
Preceding gene: 116332511
Following gene: 116332513
Centisome position: 26.33
GC content: 35.95
Gene sequence:
>573_bases ATGAGTCAGGCTGTAACAATCGAGCACGAATTAAAAGAACTACAGGTCAATACAGTTCGTTATAAACTTTTAGTAATCGA ATTTGCAGGTATGGTCAATCATGAAACTTTAAGAGGAATTCCGGCTAAACTAAGTTCGATCTTTTATGAGATGGAGGGAA TGTTGGTATTGGACATCAGAAAAGTGACTAATCTCAATTCGGAATTTGTGCGGGCTTTTACTGGAATTTTACATATCATC TCCGAAAGATTTACTCGATATTTTATCATGACAGCAGATCAAAAAATTTATAACTGGATTATGAATTATAATAAACTGAG AGAGGTCAAACCGGTAACAGATTTTGACGAGCTCAAAGAGGCTTTGGAATTAGACAAAATGGCGCCCCTTCTGGGCTTGA AAAACGTGGGTTATATGCGAGCATTTACCACAAAACAAGAAAACCAACAGAAGGAACGCAATGAAAAGAAAAGTATATGT AGGAATGGATGTCCACAAAGAAACGATCCAAATCGCGTATTTAACGAGCAATTCAAAGGAAATATTGAAAGAACAACAGA TAAAACACAATGA
Upstream 100 bases:
>100_bases CATACTATAAGCTGAAAAGCATTTTGTAATCGATTCAAATATACTCCTTATAAACACAAAGAGGCTTTTAAAAAATCTCT TTTGTTTTGGGGGGTCAAGA
Downstream 100 bases:
>100_bases AGTTCAAATCAAAAAGTTCATCAAAAAACTCAAAACAGAATGGAACGAGATATATTGTTGTTACGAGGCAGGAGTAACCG GTTATCCACTTTACAGATAT
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 190; Mature: 189
Protein sequence:
>190_residues MSQAVTIEHELKELQVNTVRYKLLVIEFAGMVNHETLRGIPAKLSSIFYEMEGMLVLDIRKVTNLNSEFVRAFTGILHII SERFTRYFIMTADQKIYNWIMNYNKLREVKPVTDFDELKEALELDKMAPLLGLKNVGYMRAFTTKQENQQKERNEKKSIC RNGCPQRNDPNRVFNEQFKGNIERTTDKTQ
Sequences:
>Translated_190_residues MSQAVTIEHELKELQVNTVRYKLLVIEFAGMVNHETLRGIPAKLSSIFYEMEGMLVLDIRKVTNLNSEFVRAFTGILHII SERFTRYFIMTADQKIYNWIMNYNKLREVKPVTDFDELKEALELDKMAPLLGLKNVGYMRAFTTKQENQQKERNEKKSIC RNGCPQRNDPNRVFNEQFKGNIERTTDKTQ >Mature_189_residues SQAVTIEHELKELQVNTVRYKLLVIEFAGMVNHETLRGIPAKLSSIFYEMEGMLVLDIRKVTNLNSEFVRAFTGILHIIS ERFTRYFIMTADQKIYNWIMNYNKLREVKPVTDFDELKEALELDKMAPLLGLKNVGYMRAFTTKQENQQKERNEKKSICR NGCPQRNDPNRVFNEQFKGNIERTTDKTQ
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 22330; Mature: 22199
Theoretical pI: Translated: 9.33; Mature: 9.33
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.1 %Cys (Translated Protein) 4.2 %Met (Translated Protein) 5.3 %Cys+Met (Translated Protein) 1.1 %Cys (Mature Protein) 3.7 %Met (Mature Protein) 4.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSQAVTIEHELKELQVNTVRYKLLVIEFAGMVNHETLRGIPAKLSSIFYEMEGMLVLDIR CCCCEEHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHCCHHHHHHHHHHHCCEEEEEEH KVTNLNSEFVRAFTGILHIISERFTRYFIMTADQKIYNWIMNYNKLREVKPVTDFDELKE HHHCCCHHHHHHHHHHHHHHHHHHHHEEEEECHHHHHHHHHHHHHHHHCCCCCCHHHHHH ALELDKMAPLLGLKNVGYMRAFTTKQENQQKERNEKKSICRNGCPQRNDPNRVFNEQFKG HHHHHHHHHHHHCCCCCHHHHHHCHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHCC NIERTTDKTQ CCCCCCCCCC >Mature Secondary Structure SQAVTIEHELKELQVNTVRYKLLVIEFAGMVNHETLRGIPAKLSSIFYEMEGMLVLDIR CCCEEHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHCCHHHHHHHHHHHCCEEEEEEH KVTNLNSEFVRAFTGILHIISERFTRYFIMTADQKIYNWIMNYNKLREVKPVTDFDELKE HHHCCCHHHHHHHHHHHHHHHHHHHHEEEEECHHHHHHHHHHHHHHHHCCCCCCHHHHHH ALELDKMAPLLGLKNVGYMRAFTTKQENQQKERNEKKSICRNGCPQRNDPNRVFNEQFKG HHHHHHHHHHHHCCCCCHHHHHHCHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHCC NIERTTDKTQ CCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA