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The map label for this gene is 116332507

Identifier: 116332507

GI number: 116332507

Start: 71149

End: 72624

Strand: Direct

Name: 116332507

Synonym: LBJ_4065

Alternate gene names: NA

Gene position: 71149-72624 (Clockwise)

Preceding gene: 116332506

Following gene: 116332508

Centisome position: 23.74

GC content: 33.6

Gene sequence:

>1476_bases
ATGGTCATTGAAAAATTTAAAAGGAACTCTGAGTATCGATATATATATATCGATACTCAGAGGCAAGTTATTAAGATCAT
TGATAATGCTGGCGGTATTAAAAAAGACGATCTCCATCACATAGTTGGCCCAGGGCACTCTTCAAATGATTCAAACGAAA
GCATTATAGGAATATTTGGAGTTGGGTCAAAACGAGCTGTAGTTGCACTTTCCCCGCATACTATCATAAAATCAAGATAT
AAAAAACAGCCTACTTATAGCGTGGAAATAACAGATGATTGGTTGAAGGATGAAAATTGGAAATTTCCAGTTTATGAATT
AAGTAATATAAACGAAAATTCTACTGAGATTGAAATGACTAAAATCAGGGATATTCTAACTGGACAATCGATTCGCGATA
TTAAAGATCATATTTCTGCAATATATTCTAAAATACTAATTAATCAATATATTGAATTAAAATTAAATGGAGAACGGATC
AAACCACTACATTTTGATGAGGAATGGTCGCATAATCCGGATGTTTCTCCGAAAGGATTTGATTTAACTACCAAAGTCGG
AGGGGAAAAAATAACCGTAAAGATTACAAGAGGTTTAATTGCTGAAGGTGGTGATTCTGGGTATGGAGAATACGGAGTTT
ATATTTATTGCAATAATAGATTAATTGTTCGATCACTTAAAACCCCAGAAGTCGGTTTTTCAAAAGGTCAAGTAGGGGTG
CCACATAACTCAATCTCGCTTGCAAGAGTTATAATAGAGATCGTTGGTCCAGCAGAGCAAATGCCGTGGAATAGTAGTAA
AAGCGGTGTTGATATAAAGCATAAGGTCTTCCAATTGATTCGGGAAAAAATGATTGAAGTAATTAAGCATTATACATCTG
CGTCTCGTAATCTTTTCCCGGAAAGGGAAACTAAAATAGCTCCTTTTAAGCAAGGTAAAATAAATTTTGAAAAAATTCAA
TCTATTTCAGAAATCGAAAAATCTGCATTACCAGAAATTCCGAGTCTTAAGAAACGGTTGCCCGATAAAATTAAGGAATT
GAACTTAAGTTTGGCTAAATCAGAACCTTGGATTGTTGGGGCGTATGAAGTCGTTGTTATGGCTGAAGTTATCAAAAACA
AAAGTTTCGAGACTAAAAACAGAATTATTCTCATTCTTCTTGATAGTTCAATTGAAATCGCTTTTAAAGATTATTTAGCT
TATAAAGTAAAATCGCATTTTTATACTGATGCGGCACTATCCAAGATATTTGATAAAAGGCACTTGGTGCATCAGGAAAT
ACAAAAATATTCAAGTGGAATCTTGGATCATTCCGATTGGAATAATTTAGATTATTATTATCGTCTTCGATGTGAGTTAG
TGCATAAGAGAGCCTCCGCAACGGTCTTAGATACTGATATTAGTAGGTTTAGTAATTTAGCAAAAAAAATACATAAGAAG
TTATTGGGGGTAAAATATCCCACACTTAAGAATTGA

Upstream 100 bases:

>100_bases
TTCAAGATGCTACACCAAGTAAAGCAGTTTTTAAATCTATTATTGCCGATTATGATGCAAAAGCAGCAATTTGCGAACTT
GTTGATAATTCAATCGATGT

Downstream 100 bases:

>100_bases
TATGAAAGTTGGTTTTAGCGTTTTTCAATGATGTCTGCCCACACCCGCTAACAATTTTTTCCTTTGTTTGAGATTATAAT
TTAATTTTTAAAATTTCATA

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 491; Mature: 491

Protein sequence:

>491_residues
MVIEKFKRNSEYRYIYIDTQRQVIKIIDNAGGIKKDDLHHIVGPGHSSNDSNESIIGIFGVGSKRAVVALSPHTIIKSRY
KKQPTYSVEITDDWLKDENWKFPVYELSNINENSTEIEMTKIRDILTGQSIRDIKDHISAIYSKILINQYIELKLNGERI
KPLHFDEEWSHNPDVSPKGFDLTTKVGGEKITVKITRGLIAEGGDSGYGEYGVYIYCNNRLIVRSLKTPEVGFSKGQVGV
PHNSISLARVIIEIVGPAEQMPWNSSKSGVDIKHKVFQLIREKMIEVIKHYTSASRNLFPERETKIAPFKQGKINFEKIQ
SISEIEKSALPEIPSLKKRLPDKIKELNLSLAKSEPWIVGAYEVVVMAEVIKNKSFETKNRIILILLDSSIEIAFKDYLA
YKVKSHFYTDAALSKIFDKRHLVHQEIQKYSSGILDHSDWNNLDYYYRLRCELVHKRASATVLDTDISRFSNLAKKIHKK
LLGVKYPTLKN

Sequences:

>Translated_491_residues
MVIEKFKRNSEYRYIYIDTQRQVIKIIDNAGGIKKDDLHHIVGPGHSSNDSNESIIGIFGVGSKRAVVALSPHTIIKSRY
KKQPTYSVEITDDWLKDENWKFPVYELSNINENSTEIEMTKIRDILTGQSIRDIKDHISAIYSKILINQYIELKLNGERI
KPLHFDEEWSHNPDVSPKGFDLTTKVGGEKITVKITRGLIAEGGDSGYGEYGVYIYCNNRLIVRSLKTPEVGFSKGQVGV
PHNSISLARVIIEIVGPAEQMPWNSSKSGVDIKHKVFQLIREKMIEVIKHYTSASRNLFPERETKIAPFKQGKINFEKIQ
SISEIEKSALPEIPSLKKRLPDKIKELNLSLAKSEPWIVGAYEVVVMAEVIKNKSFETKNRIILILLDSSIEIAFKDYLA
YKVKSHFYTDAALSKIFDKRHLVHQEIQKYSSGILDHSDWNNLDYYYRLRCELVHKRASATVLDTDISRFSNLAKKIHKK
LLGVKYPTLKN
>Mature_491_residues
MVIEKFKRNSEYRYIYIDTQRQVIKIIDNAGGIKKDDLHHIVGPGHSSNDSNESIIGIFGVGSKRAVVALSPHTIIKSRY
KKQPTYSVEITDDWLKDENWKFPVYELSNINENSTEIEMTKIRDILTGQSIRDIKDHISAIYSKILINQYIELKLNGERI
KPLHFDEEWSHNPDVSPKGFDLTTKVGGEKITVKITRGLIAEGGDSGYGEYGVYIYCNNRLIVRSLKTPEVGFSKGQVGV
PHNSISLARVIIEIVGPAEQMPWNSSKSGVDIKHKVFQLIREKMIEVIKHYTSASRNLFPERETKIAPFKQGKINFEKIQ
SISEIEKSALPEIPSLKKRLPDKIKELNLSLAKSEPWIVGAYEVVVMAEVIKNKSFETKNRIILILLDSSIEIAFKDYLA
YKVKSHFYTDAALSKIFDKRHLVHQEIQKYSSGILDHSDWNNLDYYYRLRCELVHKRASATVLDTDISRFSNLAKKIHKK
LLGVKYPTLKN

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 56205; Mature: 56205

Theoretical pI: Translated: 9.75; Mature: 9.75

Prosite motif: PS00697 DNA_LIGASE_A1

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.4 %Cys     (Translated Protein)
1.0 %Met     (Translated Protein)
1.4 %Cys+Met (Translated Protein)
0.4 %Cys     (Mature Protein)
1.0 %Met     (Mature Protein)
1.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MVIEKFKRNSEYRYIYIDTQRQVIKIIDNAGGIKKDDLHHIVGPGHSSNDSNESIIGIFG
CCCCHHCCCCCEEEEEEECCHHHHHHHHCCCCCCCCCCHHEECCCCCCCCCCCCEEEEEE
VGSKRAVVALSPHTIIKSRYKKQPTYSVEITDDWLKDENWKFPVYELSNINENSTEIEMT
CCCCCEEEEECCHHHHHHHHCCCCCEEEEEEHHHHCCCCCCCCEEEECCCCCCCCEEEHH
KIRDILTGQSIRDIKDHISAIYSKILINQYIELKLNGERIKPLHFDEEWSHNPDVSPKGF
HHHHHHCCCHHHHHHHHHHHHHHHHHHHHEEEEEECCCEECCCCCCCCCCCCCCCCCCCC
DLTTKVGGEKITVKITRGLIAEGGDSGYGEYGVYIYCNNRLIVRSLKTPEVGFSKGQVGV
EEEEECCCCEEEEEEECCEEECCCCCCCCCEEEEEEECCEEEEEECCCCCCCCCCCCCCC
PHNSISLARVIIEIVGPAEQMPWNSSKSGVDIKHKVFQLIREKMIEVIKHYTSASRNLFP
CCCHHHHHHHHHHHHCCHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCC
ERETKIAPFKQGKINFEKIQSISEIEKSALPEIPSLKKRLPDKIKELNLSLAKSEPWIVG
CCCCCCCCCCCCCCCHHHHHHHHHHHHHHCCCCHHHHHHCHHHHHHCCCEEECCCCEEEE
AYEVVVMAEVIKNKSFETKNRIILILLDSSIEIAFKDYLAYKVKSHFYTDAALSKIFDKR
HHHHHHHHHHHHCCCCCCCCCEEEEEECCCCEEHHHHHHHHHHHHHHHHHHHHHHHHHHH
HLVHQEIQKYSSGILDHSDWNNLDYYYRLRCELVHKRASATVLDTDISRFSNLAKKIHKK
HHHHHHHHHHHCCCCCCCCCCCCCEEEEEHHHHHHHHCCCEEEHHHHHHHHHHHHHHHHH
LLGVKYPTLKN
HHCCCCCCCCC
>Mature Secondary Structure
MVIEKFKRNSEYRYIYIDTQRQVIKIIDNAGGIKKDDLHHIVGPGHSSNDSNESIIGIFG
CCCCHHCCCCCEEEEEEECCHHHHHHHHCCCCCCCCCCHHEECCCCCCCCCCCCEEEEEE
VGSKRAVVALSPHTIIKSRYKKQPTYSVEITDDWLKDENWKFPVYELSNINENSTEIEMT
CCCCCEEEEECCHHHHHHHHCCCCCEEEEEEHHHHCCCCCCCCEEEECCCCCCCCEEEHH
KIRDILTGQSIRDIKDHISAIYSKILINQYIELKLNGERIKPLHFDEEWSHNPDVSPKGF
HHHHHHCCCHHHHHHHHHHHHHHHHHHHHEEEEEECCCEECCCCCCCCCCCCCCCCCCCC
DLTTKVGGEKITVKITRGLIAEGGDSGYGEYGVYIYCNNRLIVRSLKTPEVGFSKGQVGV
EEEEECCCCEEEEEEECCEEECCCCCCCCCEEEEEEECCEEEEEECCCCCCCCCCCCCCC
PHNSISLARVIIEIVGPAEQMPWNSSKSGVDIKHKVFQLIREKMIEVIKHYTSASRNLFP
CCCHHHHHHHHHHHHCCHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCC
ERETKIAPFKQGKINFEKIQSISEIEKSALPEIPSLKKRLPDKIKELNLSLAKSEPWIVG
CCCCCCCCCCCCCCCHHHHHHHHHHHHHHCCCCHHHHHHCHHHHHHCCCEEECCCCEEEE
AYEVVVMAEVIKNKSFETKNRIILILLDSSIEIAFKDYLAYKVKSHFYTDAALSKIFDKR
HHHHHHHHHHHHCCCCCCCCCEEEEEECCCCEEHHHHHHHHHHHHHHHHHHHHHHHHHHH
HLVHQEIQKYSSGILDHSDWNNLDYYYRLRCELVHKRASATVLDTDISRFSNLAKKIHKK
HHHHHHHHHHHCCCCCCCCCCCCCEEEEEHHHHHHHHCCCEEEHHHHHHHHHHHHHHHHH
LLGVKYPTLKN
HHCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA