| Definition | Leptospira borgpetersenii serovar Hardjo-bovis JB197 chromosome 2, complete sequence. |
|---|---|
| Accession | NC_008511 |
| Length | 299,762 |
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The map label for this gene is batB
Identifier: 116332488
GI number: 116332488
Start: 49007
End: 50050
Strand: Direct
Name: batB
Synonym: LBJ_4046
Alternate gene names: NA
Gene position: 49007-50050 (Clockwise)
Preceding gene: 116332487
Following gene: 116332489
Centisome position: 16.35
GC content: 42.24
Gene sequence:
>1044_bases ATGAATTACGAGTTTTCGGCTTATCTAAAAAGTTTATTTTTCACTCTCATATTCGTATGGATTATATATTCTATATTTAG AATATTCCTGATTTATAAAATAAAAAAATGGAGGGTTTCTTATCCCGGTTTGGAGAGAACTTCCTCTTTCCCCGATACTC GTTTTGTGTTTGTAAGAATTCTGTTGATTTTTGCGACCTTGGTATGTTTCTTTTTCAGCGGTCTGAAAACGGAAACCAGG GACGAAAAAAAGGAGGAATCTTTCAAAGGAGTCGATATACTCTTTCTCGTGGACGTAAGCCTTTCCATGCAAGCAATCGA TAGTCCTCCTACCCGATTAGCAAGATTCAAAGAAGTGTTATTGCGTATGTTGCCTGCTCTTTCCGGAAATCGCTTCGGGA TGATCGTCTTTGCCGGGAGTCCGTTTTTATACTGTCCGATGACTTCGGACGTTTCCGCCTTTTCGGACTACGTGCGCGGT TTGGATGTCGACATGGTCGGAGACCGGGGGACGGATTTGGATGGGGCGTTTTCGAAAGCGGATGCATTGCTTGGATCCGA AAAAGTTTTTCGGAATCGAATTTTGATTCTGGTGACGGACGGAGAGGATCAAAACGATCCCGATCCCGTTTCTTTTCCGG CCAGTTTTCAAGTGTGGGCGGCCGGGACGGAGGCGGGAGGTCCGATCGTTTATAACGACGAAAATTCCGGTTTAAAAGGT TTTCTTTTGAAGGATGGAACTTTGACGCCGGACTTAAACTCTCCCGGAATCATACATTCTAAAATGAATCGAACCTTTTT ACGCAAACTTGCCGATAAAAACGGAGGGATATTTTATTCCTTGGATTCGGAACCGCCGGACGTAACGTCTTTTCAAAGGA AAATTCTTTCTTTGGAAGAGAATCTGTATTCTAGAAGCAAGAATTTGGAACGTGCGGAAGGTTCCGGTAAATTTTTGTTT ATGGCGATTTTTTTTCTGTTATCGGATTGGGTTTTTGTGGAATTTTTCCTGTTTTCTAAACGGAAATCGGAAGTTGGAAT ATGA
Upstream 100 bases:
>100_bases GGGAAATCCGGGAAACCGAGTATGAGATTTGGCTTTACCGAGCCCTTTCCGTTTTACTTTTGGATCTGATGCTACGGGCT TTTTTTCTTAGGTATTACGT
Downstream 100 bases:
>100_bases AACGGATTCGTATATTAGAATATTTAATGATTCTGATTTGTTTTCTTTTTGTCGACTCTTTGCTCGCGATCGAATTGGAT CCGGGAGGAAATCGGATCGC
Product: BatB
Products: NA
Alternate protein names: BatB Protein; BatA Protein; Aerotolerance-Related Membrane Protein; Von Willebrand Factor Type A Domain-Containing Protein; Aerotolerance Operon BatA; VWFA Superfamily Protein; Batb Protein; Aerotolerance-Related Cytoplasmic Membrane Protein BatB; BatB/BatC Protein; TPR Domain-Containing Protein
Number of amino acids: Translated: 347; Mature: 347
Protein sequence:
>347_residues MNYEFSAYLKSLFFTLIFVWIIYSIFRIFLIYKIKKWRVSYPGLERTSSFPDTRFVFVRILLIFATLVCFFFSGLKTETR DEKKEESFKGVDILFLVDVSLSMQAIDSPPTRLARFKEVLLRMLPALSGNRFGMIVFAGSPFLYCPMTSDVSAFSDYVRG LDVDMVGDRGTDLDGAFSKADALLGSEKVFRNRILILVTDGEDQNDPDPVSFPASFQVWAAGTEAGGPIVYNDENSGLKG FLLKDGTLTPDLNSPGIIHSKMNRTFLRKLADKNGGIFYSLDSEPPDVTSFQRKILSLEENLYSRSKNLERAEGSGKFLF MAIFFLLSDWVFVEFFLFSKRKSEVGI
Sequences:
>Translated_347_residues MNYEFSAYLKSLFFTLIFVWIIYSIFRIFLIYKIKKWRVSYPGLERTSSFPDTRFVFVRILLIFATLVCFFFSGLKTETR DEKKEESFKGVDILFLVDVSLSMQAIDSPPTRLARFKEVLLRMLPALSGNRFGMIVFAGSPFLYCPMTSDVSAFSDYVRG LDVDMVGDRGTDLDGAFSKADALLGSEKVFRNRILILVTDGEDQNDPDPVSFPASFQVWAAGTEAGGPIVYNDENSGLKG FLLKDGTLTPDLNSPGIIHSKMNRTFLRKLADKNGGIFYSLDSEPPDVTSFQRKILSLEENLYSRSKNLERAEGSGKFLF MAIFFLLSDWVFVEFFLFSKRKSEVGI >Mature_347_residues MNYEFSAYLKSLFFTLIFVWIIYSIFRIFLIYKIKKWRVSYPGLERTSSFPDTRFVFVRILLIFATLVCFFFSGLKTETR DEKKEESFKGVDILFLVDVSLSMQAIDSPPTRLARFKEVLLRMLPALSGNRFGMIVFAGSPFLYCPMTSDVSAFSDYVRG LDVDMVGDRGTDLDGAFSKADALLGSEKVFRNRILILVTDGEDQNDPDPVSFPASFQVWAAGTEAGGPIVYNDENSGLKG FLLKDGTLTPDLNSPGIIHSKMNRTFLRKLADKNGGIFYSLDSEPPDVTSFQRKILSLEENLYSRSKNLERAEGSGKFLF MAIFFLLSDWVFVEFFLFSKRKSEVGI
Specific function: Unknown
COG id: COG2304
COG function: function code R; Uncharacterized protein containing a von Willebrand factor type A (vWA) domain
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 39363; Mature: 39363
Theoretical pI: Translated: 6.13; Mature: 6.13
Prosite motif: PS50234 VWFA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.6 %Cys (Translated Protein) 2.3 %Met (Translated Protein) 2.9 %Cys+Met (Translated Protein) 0.6 %Cys (Mature Protein) 2.3 %Met (Mature Protein) 2.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MNYEFSAYLKSLFFTLIFVWIIYSIFRIFLIYKIKKWRVSYPGLERTSSFPDTRFVFVRI CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEECCCCCCCCCCCCCHHHHHHHH LLIFATLVCFFFSGLKTETRDEKKEESFKGVDILFLVDVSLSMQAIDSPPTRLARFKEVL HHHHHHHHHHHHHCCCCCHHHHHHHHHCCCCEEEEEEECCHHHHHCCCCHHHHHHHHHHH LRMLPALSGNRFGMIVFAGSPFLYCPMTSDVSAFSDYVRGLDVDMVGDRGTDLDGAFSKA HHHHHHCCCCCEEEEEEECCCEEEECCCCCHHHHHHHHHCCCEEEECCCCCCCCCHHHHH DALLGSEKVFRNRILILVTDGEDQNDPDPVSFPASFQVWAAGTEAGGPIVYNDENSGLKG HHHHCHHHHHHCCEEEEEECCCCCCCCCCCCCCCCEEEEECCCCCCCCEEECCCCCCCEE FLLKDGTLTPDLNSPGIIHSKMNRTFLRKLADKNGGIFYSLDSEPPDVTSFQRKILSLEE EEEECCCCCCCCCCCCCCHHHHHHHHHHHHHCCCCCEEEECCCCCCCHHHHHHHHHHHHH NLYSRSKNLERAEGSGKFLFMAIFFLLSDWVFVEFFLFSKRKSEVGI HHHHHHCCCHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCHHCCCC >Mature Secondary Structure MNYEFSAYLKSLFFTLIFVWIIYSIFRIFLIYKIKKWRVSYPGLERTSSFPDTRFVFVRI CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEECCCCCCCCCCCCCHHHHHHHH LLIFATLVCFFFSGLKTETRDEKKEESFKGVDILFLVDVSLSMQAIDSPPTRLARFKEVL HHHHHHHHHHHHHCCCCCHHHHHHHHHCCCCEEEEEEECCHHHHHCCCCHHHHHHHHHHH LRMLPALSGNRFGMIVFAGSPFLYCPMTSDVSAFSDYVRGLDVDMVGDRGTDLDGAFSKA HHHHHHCCCCCEEEEEEECCCEEEECCCCCHHHHHHHHHCCCEEEECCCCCCCCCHHHHH DALLGSEKVFRNRILILVTDGEDQNDPDPVSFPASFQVWAAGTEAGGPIVYNDENSGLKG HHHHCHHHHHHCCEEEEEECCCCCCCCCCCCCCCCEEEEECCCCCCCCEEECCCCCCCEE FLLKDGTLTPDLNSPGIIHSKMNRTFLRKLADKNGGIFYSLDSEPPDVTSFQRKILSLEE EEEECCCCCCCCCCCCCCHHHHHHHHHHHHHCCCCCEEEECCCCCCCHHHHHHHHHHHHH NLYSRSKNLERAEGSGKFLFMAIFFLLSDWVFVEFFLFSKRKSEVGI HHHHHHCCCHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCHHCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA