Click here to switch to the map view.

The map label for this gene is 116329546

Identifier: 116329546

GI number: 116329546

Start: 3599220

End: 3599972

Strand: Direct

Name: 116329546

Synonym: LBL_3023

Alternate gene names: NA

Gene position: 3599220-3599972 (Clockwise)

Preceding gene: 116329542

Following gene: 116329548

Centisome position: 99.58

GC content: 33.73

Gene sequence:

>753_bases
ATGGCTCTTTTTTTGGACTTTGATAACACACTTTTAGATTCGATCGGAATCTACGAAACCACGATTCAGCAATTTTGTAG
AAACGCAAAAGAATACGGATTTTCTTCCGCAAAAGAATTTTCGGAGTTCTATGAAACTGCGAGAAAAGAAACAAAAATAG
AACTGAAGGATTTTCCTTCGAATCGGCTTCGTTTAATTTACTTCAAAAAAATGTGCCTGTCAAAGTGGGGAACTTTGGAC
CCGAAATGGATCTTAAAATTAGAAAGAGATTATTTCCGAAACTTTCAAGATGGAATTAAGGTTCGTAAAAAAAAATACGA
GAAGGAATATAAGGAAGTTTTTTTACTCTTAAAAACAATTTCAAAGAAACATAAACTTCTTTTTTGTACTAACGAAAATC
TGAGAACTCAATTGATTAAGTTCAATCTTTTATTTCCAAAAATTTTTCCTTACGTAATTTTAAGCTCGGAAGAAGTCGGA
AAGGAAAAACCTTCGGAAGAATTCTACTCCAGAGCGAACCGGCTTGTTTCCGAAGAAAAAGTCGTCTCGATGATAGGTGA
TTCGTTAAAAGACGATATCGAAGGGGCGCTTCGTTATGGAATTTCAGCGATTCACATAACATCTATCTTTTCTAAAAAAC
AGAGTAGTCTGAAAGAACGAACAATTTCGTTTGAATTCGATTCTGATGGAAAGCGAAAATATTCCTACTTGGAAACAAAC
GATTTAAGAACCGCTTTGAAATTATTTCTTTAA

Upstream 100 bases:

>100_bases
TGTCCATACTTGTAGGAAGATTTAGGAGAATCTCCAATCATGCAAGGAAAAATGGATTAAAAGAATTGCATCTGGAATTG
AAAAAATTCTTTTGCAAGGA

Downstream 100 bases:

>100_bases
AACAGCGAATAACGTATTGTTTAAGTTCATCGTTTTAAAACTGAGTAACCAAACGGCTTTAGTCGCGTAATAATAAACTT
TTTTAAAAAGAGGACCAAAA

Product: hydrolase

Products: NA

Alternate protein names: Dehalogenase-Like Hydrolase

Number of amino acids: Translated: 250; Mature: 249

Protein sequence:

>250_residues
MALFLDFDNTLLDSIGIYETTIQQFCRNAKEYGFSSAKEFSEFYETARKETKIELKDFPSNRLRLIYFKKMCLSKWGTLD
PKWILKLERDYFRNFQDGIKVRKKKYEKEYKEVFLLLKTISKKHKLLFCTNENLRTQLIKFNLLFPKIFPYVILSSEEVG
KEKPSEEFYSRANRLVSEEKVVSMIGDSLKDDIEGALRYGISAIHITSIFSKKQSSLKERTISFEFDSDGKRKYSYLETN
DLRTALKLFL

Sequences:

>Translated_250_residues
MALFLDFDNTLLDSIGIYETTIQQFCRNAKEYGFSSAKEFSEFYETARKETKIELKDFPSNRLRLIYFKKMCLSKWGTLD
PKWILKLERDYFRNFQDGIKVRKKKYEKEYKEVFLLLKTISKKHKLLFCTNENLRTQLIKFNLLFPKIFPYVILSSEEVG
KEKPSEEFYSRANRLVSEEKVVSMIGDSLKDDIEGALRYGISAIHITSIFSKKQSSLKERTISFEFDSDGKRKYSYLETN
DLRTALKLFL
>Mature_249_residues
ALFLDFDNTLLDSIGIYETTIQQFCRNAKEYGFSSAKEFSEFYETARKETKIELKDFPSNRLRLIYFKKMCLSKWGTLDP
KWILKLERDYFRNFQDGIKVRKKKYEKEYKEVFLLLKTISKKHKLLFCTNENLRTQLIKFNLLFPKIFPYVILSSEEVGK
EKPSEEFYSRANRLVSEEKVVSMIGDSLKDDIEGALRYGISAIHITSIFSKKQSSLKERTISFEFDSDGKRKYSYLETND
LRTALKLFL

Specific function: Unknown

COG id: COG1011

COG function: function code R; Predicted hydrolase (HAD superfamily)

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 29615; Mature: 29483

Theoretical pI: Translated: 9.74; Mature: 9.74

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.2 %Cys     (Translated Protein)
1.2 %Met     (Translated Protein)
2.4 %Cys+Met (Translated Protein)
1.2 %Cys     (Mature Protein)
0.8 %Met     (Mature Protein)
2.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MALFLDFDNTLLDSIGIYETTIQQFCRNAKEYGFSSAKEFSEFYETARKETKIELKDFPS
CEEEEECCHHHHHHCCHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHCEEEHCCCCC
NRLRLIYFKKMCLSKWGTLDPKWILKLERDYFRNFQDGIKVRKKKYEKEYKEVFLLLKTI
CCEEHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
SKKHKLLFCTNENLRTQLIKFNLLFPKIFPYVILSSEEVGKEKPSEEFYSRANRLVSEEK
CCCCCEEEEECCCHHHHHHHHHHHHHHHHHHHEECCHHHCCCCCHHHHHHHHHHHHHHHH
VVSMIGDSLKDDIEGALRYGISAIHITSIFSKKQSSLKERTISFEFDSDGKRKYSYLETN
HHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHEEEEEECCCCCCEEHHHCHH
DLRTALKLFL
HHHHHHHHHC
>Mature Secondary Structure 
ALFLDFDNTLLDSIGIYETTIQQFCRNAKEYGFSSAKEFSEFYETARKETKIELKDFPS
EEEEECCHHHHHHCCHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHCEEEHCCCCC
NRLRLIYFKKMCLSKWGTLDPKWILKLERDYFRNFQDGIKVRKKKYEKEYKEVFLLLKTI
CCEEHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
SKKHKLLFCTNENLRTQLIKFNLLFPKIFPYVILSSEEVGKEKPSEEFYSRANRLVSEEK
CCCCCEEEEECCCHHHHHHHHHHHHHHHHHHHEECCHHHCCCCCHHHHHHHHHHHHHHHH
VVSMIGDSLKDDIEGALRYGISAIHITSIFSKKQSSLKERTISFEFDSDGKRKYSYLETN
HHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHEEEEEECCCCCCEEHHHCHH
DLRTALKLFL
HHHHHHHHHC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA