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The map label for this gene is 116329481

Identifier: 116329481

GI number: 116329481

Start: 3511415

End: 3511813

Strand: Direct

Name: 116329481

Synonym: LBL_2952

Alternate gene names: NA

Gene position: 3511415-3511813 (Clockwise)

Preceding gene: 116329480

Following gene: 116329484

Centisome position: 97.15

GC content: 38.35

Gene sequence:

>399_bases
ATGCTATTAGTACCCACATACATCGCCGATTCCTCAATCGGCGGTTTCGGTCTTTTTGCCGGCCGAGACATTCAAAAAGG
CGAATTGATTTGGAAATATCATCCTAAGACGGTCTGGGTTTTAACTGATCAAGAACTAAATTCCCTTCCGTTATCCGTTC
AAGAAATGTTTCGCATTTATTCCTATCAAACCGCCGGAAAATGGTTCTACTGTTCGGATAATTCCAAATTTATGAATCAC
AGTGACGATCCGAATACAAAAGAAGATTTTACGAGCGAACAAACAAACCCAATGGGACAAGACATTGCAACGAGATTGAT
TCTAAAAGGAGAAGAACTCACGTGCAATTATAAACTTTTCGACGACAATTGGAAAATAAAACTCAGTTTAATTTTTTGA

Upstream 100 bases:

>100_bases
AAGATTTTCCGTTCCCGAGCCCGAACAGCAGGCCATGGTCTTGTAGGAATTCCCTTTTTTTACTTGCAATTTTTTTCCCG
GCTAAATTACGTTCTTTCCA

Downstream 100 bases:

>100_bases
CGCTTTTATTTGTCCTTTGAGTTGAATTGCGGCGAGAGCATAACCTCCGTCCGCCGAATCCACAAAATGGACTTCCCTCA
CGGAACCTTCGTGTAAAGCG

Product: SET domain-containing protein

Products: NA

Alternate protein names: SET Domain-Containing Protein

Number of amino acids: Translated: 132; Mature: 132

Protein sequence:

>132_residues
MLLVPTYIADSSIGGFGLFAGRDIQKGELIWKYHPKTVWVLTDQELNSLPLSVQEMFRIYSYQTAGKWFYCSDNSKFMNH
SDDPNTKEDFTSEQTNPMGQDIATRLILKGEELTCNYKLFDDNWKIKLSLIF

Sequences:

>Translated_132_residues
MLLVPTYIADSSIGGFGLFAGRDIQKGELIWKYHPKTVWVLTDQELNSLPLSVQEMFRIYSYQTAGKWFYCSDNSKFMNH
SDDPNTKEDFTSEQTNPMGQDIATRLILKGEELTCNYKLFDDNWKIKLSLIF
>Mature_132_residues
MLLVPTYIADSSIGGFGLFAGRDIQKGELIWKYHPKTVWVLTDQELNSLPLSVQEMFRIYSYQTAGKWFYCSDNSKFMNH
SDDPNTKEDFTSEQTNPMGQDIATRLILKGEELTCNYKLFDDNWKIKLSLIF

Specific function: Unknown

COG id: COG2940

COG function: function code R; Proteins containing SET domain

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 15304; Mature: 15304

Theoretical pI: Translated: 4.87; Mature: 4.87

Prosite motif: PS50280 SET

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.5 %Cys     (Translated Protein)
3.0 %Met     (Translated Protein)
4.5 %Cys+Met (Translated Protein)
1.5 %Cys     (Mature Protein)
3.0 %Met     (Mature Protein)
4.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MLLVPTYIADSSIGGFGLFAGRDIQKGELIWKYHPKTVWVLTDQELNSLPLSVQEMFRIY
CEEECCEECCCCCCCEEEEECCCCCCCCEEEEECCCEEEEEECCCCCCCCCCHHHHHHHH
SYQTAGKWFYCSDNSKFMNHSDDPNTKEDFTSEQTNPMGQDIATRLILKGEELTCNYKLF
CEECCCCEEEECCCCCCCCCCCCCCCCHHCCCCCCCCCCHHHHEEEEECCCCEEEEEEEE
DDNWKIKLSLIF
CCCEEEEEEEEC
>Mature Secondary Structure
MLLVPTYIADSSIGGFGLFAGRDIQKGELIWKYHPKTVWVLTDQELNSLPLSVQEMFRIY
CEEECCEECCCCCCCEEEEECCCCCCCCEEEEECCCEEEEEECCCCCCCCCCHHHHHHHH
SYQTAGKWFYCSDNSKFMNHSDDPNTKEDFTSEQTNPMGQDIATRLILKGEELTCNYKLF
CEECCCCEEEECCCCCCCCCCCCCCCCHHCCCCCCCCCCHHHHEEEEECCCCEEEEEEEE
DDNWKIKLSLIF
CCCEEEEEEEEC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA