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The map label for this gene is 116329399

Identifier: 116329399

GI number: 116329399

Start: 3416543

End: 3417487

Strand: Direct

Name: 116329399

Synonym: LBL_2863

Alternate gene names: NA

Gene position: 3416543-3417487 (Clockwise)

Preceding gene: 116329396

Following gene: 116329400

Centisome position: 94.52

GC content: 37.88

Gene sequence:

>945_bases
GTGTCTCATCTAATACTCATTCCGGTTTGTATTGTAGGAGGTTGGATACTCAAACGAGGAAAAATTTTTCCGGAAAATAC
GGGATTCGCACTCGGAAATTTCGTAGTTTATATTTCCCTTCCTGCTCTTATTTTAGCCAGCGTCCCAACAATGAAACTGG
AAACCTCTCTGATTTATTTGGCCTCTATGCCATGGATTCTTTTCGGACTTTCAGTCGTATTTTTTTATATAATCGGAAAA
TTCTTCCATTGGAGTTCGGAAACAAGAATCGTAACGACACTCTGTTGCGGATTGGGAAACACGTCTTTTTTAGGACTTCC
CATTTTAAGGGTGCTCTACGGAGAAGGAATTACTAACTCGGTGTTAATCATCGATCAATTCGGAACTTTCCTCTGCCTTG
CAATTCCGGGATTTATCCTTTCTCTGAGTTTCTTATCCCAAAACGATCAAGAGAGAAGCGGAAATCCGGTCGGATCTATT
TTGAAAAAGCTCTTTACTTTTCCTCCTTTTCTTGCTTTACTTTTTTCGTTTTTACTCAGATTTTTCACCATTTCGGAATT
GATCCATTCCGTACTCAAAATTTTGGGAGAAACATTAGTGCCAATCGCTTTATTTACCGTTGGATTTCAAATGGAATTCC
CTACGTTAGGTTCTAAATCCGAAAAATCAGAAAATTTCATACAACCTTTATTTATCGGCCTTATTTATAAATTGCTTCTT
GCTCCAATCTTGATATTTCTAACCTATCGTTTTCTAAACGTAAACCTAAATCATCTGCGAGTAGCTGTCTTAGAAGCGGC
AATGGCGCCTATGATTACTGCGTCTATCGTTTCTATTCAAATGGGTTTCAGACCCGCTCTTTCGGCAGTTTTCCCAGGGG
TTGGTATCTTAATTTCGATTCCGACTTTATTTTTATTTTATATGTTTTTGGAGAATTTTTTCTGA

Upstream 100 bases:

>100_bases
AGAGCATTTCCCTCGTAATGAAAAGGTCGCCGGTTCAATTCCGGCAGCGGGCTAATCCTAAATCTCTTGCCCTATCGCGT
CTACCGTAAACTCTGTACAT

Downstream 100 bases:

>100_bases
CTGATTTTTCCGAATCACTAACCGATCTATTTTCCGCAGTCAAAACCGGAAAAACGGATGAAATTCAAAGACTCCTCACT
TCCATGGAAGGAGAAGAAAT

Product: permease

Products: NA

Alternate protein names: Permease; Auxin Efflux Carrier Family Protein; Malate Permease; Integral Membrane Protein; Transporter Auxin Efflux Carrier Family; Auxin Efflux Carrier Superfamily; Auxin Efflux Carrier Protein

Number of amino acids: Translated: 314; Mature: 313

Protein sequence:

>314_residues
MSHLILIPVCIVGGWILKRGKIFPENTGFALGNFVVYISLPALILASVPTMKLETSLIYLASMPWILFGLSVVFFYIIGK
FFHWSSETRIVTTLCCGLGNTSFLGLPILRVLYGEGITNSVLIIDQFGTFLCLAIPGFILSLSFLSQNDQERSGNPVGSI
LKKLFTFPPFLALLFSFLLRFFTISELIHSVLKILGETLVPIALFTVGFQMEFPTLGSKSEKSENFIQPLFIGLIYKLLL
APILIFLTYRFLNVNLNHLRVAVLEAAMAPMITASIVSIQMGFRPALSAVFPGVGILISIPTLFLFYMFLENFF

Sequences:

>Translated_314_residues
MSHLILIPVCIVGGWILKRGKIFPENTGFALGNFVVYISLPALILASVPTMKLETSLIYLASMPWILFGLSVVFFYIIGK
FFHWSSETRIVTTLCCGLGNTSFLGLPILRVLYGEGITNSVLIIDQFGTFLCLAIPGFILSLSFLSQNDQERSGNPVGSI
LKKLFTFPPFLALLFSFLLRFFTISELIHSVLKILGETLVPIALFTVGFQMEFPTLGSKSEKSENFIQPLFIGLIYKLLL
APILIFLTYRFLNVNLNHLRVAVLEAAMAPMITASIVSIQMGFRPALSAVFPGVGILISIPTLFLFYMFLENFF
>Mature_313_residues
SHLILIPVCIVGGWILKRGKIFPENTGFALGNFVVYISLPALILASVPTMKLETSLIYLASMPWILFGLSVVFFYIIGKF
FHWSSETRIVTTLCCGLGNTSFLGLPILRVLYGEGITNSVLIIDQFGTFLCLAIPGFILSLSFLSQNDQERSGNPVGSIL
KKLFTFPPFLALLFSFLLRFFTISELIHSVLKILGETLVPIALFTVGFQMEFPTLGSKSEKSENFIQPLFIGLIYKLLLA
PILIFLTYRFLNVNLNHLRVAVLEAAMAPMITASIVSIQMGFRPALSAVFPGVGILISIPTLFLFYMFLENFF

Specific function: Unknown

COG id: COG0679

COG function: function code R; Predicted permeases

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 34919; Mature: 34787

Theoretical pI: Translated: 8.89; Mature: 8.89

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.3 %Cys     (Translated Protein)
2.5 %Met     (Translated Protein)
3.8 %Cys+Met (Translated Protein)
1.3 %Cys     (Mature Protein)
2.2 %Met     (Mature Protein)
3.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSHLILIPVCIVGGWILKRGKIFPENTGFALGNFVVYISLPALILASVPTMKLETSLIYL
CCCEEEHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHH
ASMPWILFGLSVVFFYIIGKFFHWSSETRIVTTLCCGLGNTSFLGLPILRVLYGEGITNS
HHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHCCCCCCHHHHHHHHHHHCCCCCCC
VLIIDQFGTFLCLAIPGFILSLSFLSQNDQERSGNPVGSILKKLFTFPPFLALLFSFLLR
EEEEHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHCCCHHHHHHHHHHHH
FFTISELIHSVLKILGETLVPIALFTVGFQMEFPTLGSKSEKSENFIQPLFIGLIYKLLL
HHHHHHHHHHHHHHHHHHHHHHHHHHHCCEEECCCCCCCCCCHHHHHHHHHHHHHHHHHH
APILIFLTYRFLNVNLNHLRVAVLEAAMAPMITASIVSIQMGFRPALSAVFPGVGILISI
HHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHCCCHHHHHHH
PTLFLFYMFLENFF
HHHHHHHHHHHHCC
>Mature Secondary Structure 
SHLILIPVCIVGGWILKRGKIFPENTGFALGNFVVYISLPALILASVPTMKLETSLIYL
CCEEEHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHH
ASMPWILFGLSVVFFYIIGKFFHWSSETRIVTTLCCGLGNTSFLGLPILRVLYGEGITNS
HHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHCCCCCCHHHHHHHHHHHCCCCCCC
VLIIDQFGTFLCLAIPGFILSLSFLSQNDQERSGNPVGSILKKLFTFPPFLALLFSFLLR
EEEEHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHCCCHHHHHHHHHHHH
FFTISELIHSVLKILGETLVPIALFTVGFQMEFPTLGSKSEKSENFIQPLFIGLIYKLLL
HHHHHHHHHHHHHHHHHHHHHHHHHHHCCEEECCCCCCCCCCHHHHHHHHHHHHHHHHHH
APILIFLTYRFLNVNLNHLRVAVLEAAMAPMITASIVSIQMGFRPALSAVFPGVGILISI
HHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHCCCHHHHHHH
PTLFLFYMFLENFF
HHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA