| Definition | Leptospira borgpetersenii serovar Hardjo-bovis L550 chromosome 1, complete sequence. |
|---|---|
| Accession | NC_008508 |
| Length | 3,614,446 |
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The map label for this gene is 116329396
Identifier: 116329396
GI number: 116329396
Start: 3405911
End: 3407713
Strand: Direct
Name: 116329396
Synonym: LBL_2853
Alternate gene names: NA
Gene position: 3405911-3407713 (Clockwise)
Preceding gene: 116329395
Following gene: 116329399
Centisome position: 94.23
GC content: 39.05
Gene sequence:
>1803_bases ATGAAAACTTACAAATTAAGCATCATCCAACTTTTGCTCATTTTTATTGTTTTCTTATTTTCGGAAATTGATGCAAAAAA AACGAGAAGAGCCAAACGCCCGAAAGTTCGCAATACTGCAACACAAAGAATTCAACAACCGATCGAAGTTCAAAAACAGA AAGCGGATACTCAAATTATCCCAATCGAAACCGAAATTAAAGAACTTAAAAAAGACACTCCCTGGTACGAATCGGTTAAA CTTGGCGGCTTGATTCGAATCCGCCCGGAAGCGCGATACAATTACGATTTTGATAAATTCAAAAATGATAATATTTCTTT CGTTGGAGCTAAAGCGCAAATTTGGATCGAAAAAGAATTTACCCAAAATATGAAAGCAAGAATCGTCTTACAAGACTCCG CACTTTGGGGAGGGGAAAAAGGTTCTATCATTGGAATCGATACCGCAAACGACAATACAAGACAATCTGTAGGAATTCGA GAGGCTTGGGTTGAATCCAAAGAATTAATCGGCCCAGTTACATTACAAGCGGGAAGACAAATTCTAAAATACGGAGACGA AAGACTCGTAGGTGCATTGGAATGGAACAACGTAGGAAGAAGTTTTAACGGTTTTCGTTTGAAAATCGACAAAGAACTTT TTTCCACTCATGCTTGGGTCATGATCGTCGGAGAGCAGGATTCGGACGTAGCGGGCAATTCCACAAATTTAGGAAAAAGA AACTCATTCCCGATTCAATACAATTGTCCCCCCAATTCTTTTTCGTCTTCAGCTTGTACATTGACTACTGAACTTTCAAA ACAACAGCAAGGAGATGCAACCTTCACCGGTTTTTATAATACATTTAAACCTTCCGACTTACTTCACATAGACGCTTATT ACATTGGATTGTACAAGAAATGGCTTCCTCAGAACAACTCTACAATTTTGCTTCTTCCTAATCCAGAGACGATTCCAAGA GATTCAAGGTACGACCAACTACATACATTCGGATTCAGACTTTCCAATAAAACAACTTCCGATAAAAAAGCAAAAATACC ATTCGATTTTTCGATCGAATATGCAATACAGAACGGAAAAAACGGGCTGAACGTCACGCCAAATTGGGACATCTTAAACA CAAACGTTTCCACCGTCGACCCACTTACCGGCAAGACTGTAACCAATAGTATTTATAAAGAAAAACAAAGTTACGATGCT TATGCGTTCGCATTCGACATCGGTTATACAATCGGACCTTTTCGATTTGGAGGAATTTACGACATCGGTAGCGGAGATCC AAATCGAAAAGACGGAAAAGTTGCAACCTTCTCAAATTTATTCCATTCTAATCACGGATTCTTTGGAGAAGCGGATCAAG TAAGTTGGGTCAACATGGTCGGTAAATCCGTAAATTTTACATGGGACGGTGGGAAATTTGGTAAATTAAAGATCGCATAC TGGATCATTGATAAGCAAAAAAGACAGGACGGTTGGTACGATGTCACTGGGAACCTCAAAGAAGGAGCCAGTACAGAATC AGCCACAAATGAACGTTTTAAAGATCCTTATGTTCAAAGTGAAAAAGGCGCCCTAGATCAAAGAGGAGTCGTAACTCTAG GAAAAAATCTATTTAGAGAAATCGATATGATTTATTCGTTCGAATATAATCATATTCTTTGGTCGTTTGGTGGAAGTTGG ATTTTTGCAGGCGATGCGGTTCGGCGTAAACTCAACGACGATTCGATTTATCCAGAATTCAGAAAAACCAACTTTCTTCC ACAAGCGCAGTTCGGTTACTTGATGATGACGGTTCAATTTTAA
Upstream 100 bases:
>100_bases TGGATTAGCTCAATGGTTGACAAACACCAGTTTATAACGTTATTCTTATGCAATCCCCTTCAAGCACACCAAAAAGGAAA TAAAACCAAAAGAGGTTTGA
Downstream 100 bases:
>100_bases ATCGCGACAAAAATAACTTTAATAATTTTGAATATACTTAACGAATCTGAAGGTGAAATTTTGTATAACATCCAAACGTA CGAAAATGGCACCAAAAATT
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 600; Mature: 600
Protein sequence:
>600_residues MKTYKLSIIQLLLIFIVFLFSEIDAKKTRRAKRPKVRNTATQRIQQPIEVQKQKADTQIIPIETEIKELKKDTPWYESVK LGGLIRIRPEARYNYDFDKFKNDNISFVGAKAQIWIEKEFTQNMKARIVLQDSALWGGEKGSIIGIDTANDNTRQSVGIR EAWVESKELIGPVTLQAGRQILKYGDERLVGALEWNNVGRSFNGFRLKIDKELFSTHAWVMIVGEQDSDVAGNSTNLGKR NSFPIQYNCPPNSFSSSACTLTTELSKQQQGDATFTGFYNTFKPSDLLHIDAYYIGLYKKWLPQNNSTILLLPNPETIPR DSRYDQLHTFGFRLSNKTTSDKKAKIPFDFSIEYAIQNGKNGLNVTPNWDILNTNVSTVDPLTGKTVTNSIYKEKQSYDA YAFAFDIGYTIGPFRFGGIYDIGSGDPNRKDGKVATFSNLFHSNHGFFGEADQVSWVNMVGKSVNFTWDGGKFGKLKIAY WIIDKQKRQDGWYDVTGNLKEGASTESATNERFKDPYVQSEKGALDQRGVVTLGKNLFREIDMIYSFEYNHILWSFGGSW IFAGDAVRRKLNDDSIYPEFRKTNFLPQAQFGYLMMTVQF
Sequences:
>Translated_600_residues MKTYKLSIIQLLLIFIVFLFSEIDAKKTRRAKRPKVRNTATQRIQQPIEVQKQKADTQIIPIETEIKELKKDTPWYESVK LGGLIRIRPEARYNYDFDKFKNDNISFVGAKAQIWIEKEFTQNMKARIVLQDSALWGGEKGSIIGIDTANDNTRQSVGIR EAWVESKELIGPVTLQAGRQILKYGDERLVGALEWNNVGRSFNGFRLKIDKELFSTHAWVMIVGEQDSDVAGNSTNLGKR NSFPIQYNCPPNSFSSSACTLTTELSKQQQGDATFTGFYNTFKPSDLLHIDAYYIGLYKKWLPQNNSTILLLPNPETIPR DSRYDQLHTFGFRLSNKTTSDKKAKIPFDFSIEYAIQNGKNGLNVTPNWDILNTNVSTVDPLTGKTVTNSIYKEKQSYDA YAFAFDIGYTIGPFRFGGIYDIGSGDPNRKDGKVATFSNLFHSNHGFFGEADQVSWVNMVGKSVNFTWDGGKFGKLKIAY WIIDKQKRQDGWYDVTGNLKEGASTESATNERFKDPYVQSEKGALDQRGVVTLGKNLFREIDMIYSFEYNHILWSFGGSW IFAGDAVRRKLNDDSIYPEFRKTNFLPQAQFGYLMMTVQF >Mature_600_residues MKTYKLSIIQLLLIFIVFLFSEIDAKKTRRAKRPKVRNTATQRIQQPIEVQKQKADTQIIPIETEIKELKKDTPWYESVK LGGLIRIRPEARYNYDFDKFKNDNISFVGAKAQIWIEKEFTQNMKARIVLQDSALWGGEKGSIIGIDTANDNTRQSVGIR EAWVESKELIGPVTLQAGRQILKYGDERLVGALEWNNVGRSFNGFRLKIDKELFSTHAWVMIVGEQDSDVAGNSTNLGKR NSFPIQYNCPPNSFSSSACTLTTELSKQQQGDATFTGFYNTFKPSDLLHIDAYYIGLYKKWLPQNNSTILLLPNPETIPR DSRYDQLHTFGFRLSNKTTSDKKAKIPFDFSIEYAIQNGKNGLNVTPNWDILNTNVSTVDPLTGKTVTNSIYKEKQSYDA YAFAFDIGYTIGPFRFGGIYDIGSGDPNRKDGKVATFSNLFHSNHGFFGEADQVSWVNMVGKSVNFTWDGGKFGKLKIAY WIIDKQKRQDGWYDVTGNLKEGASTESATNERFKDPYVQSEKGALDQRGVVTLGKNLFREIDMIYSFEYNHILWSFGGSW IFAGDAVRRKLNDDSIYPEFRKTNFLPQAQFGYLMMTVQF
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 68411; Mature: 68411
Theoretical pI: Translated: 9.51; Mature: 9.51
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.3 %Cys (Translated Protein) 1.2 %Met (Translated Protein) 1.5 %Cys+Met (Translated Protein) 0.3 %Cys (Mature Protein) 1.2 %Met (Mature Protein) 1.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKTYKLSIIQLLLIFIVFLFSEIDAKKTRRAKRPKVRNTATQRIQQPIEVQKQKADTQII CCEEHHHHHHHHHHHHHHHHHHCCHHHHHHHCCCCHHHHHHHHHHCCHHHHHHHCCCEEE PIETEIKELKKDTPWYESVKLGGLIRIRPEARYNYDFDKFKNDNISFVGAKAQIWIEKEF ECHHHHHHHHCCCCCHHCEEECCEEEECCCCCCCCCHHHCCCCCEEEEEEEEEEEEEHHH TQNMKARIVLQDSALWGGEKGSIIGIDTANDNTRQSVGIREAWVESKELIGPVTLQAGRQ CCCCEEEEEEEECCCCCCCCCCEEEEECCCCCCHHHCCHHHHHHHHHHHCCCEEHHHHHH ILKYGDERLVGALEWNNVGRSFNGFRLKIDKELFSTHAWVMIVGEQDSDVAGNSTNLGKR HHHCCCCCEEEEEEECCCCCCCCCEEEEEEHHHHCCCEEEEEECCCCCCCCCCCCCCCCC NSFPIQYNCPPNSFSSSACTLTTELSKQQQGDATFTGFYNTFKPSDLLHIDAYYIGLYKK CCCCEEECCCCCCCCCCEEEEEEHHHHHCCCCEEEEECCCCCCCCCEEEEEHHEEEHHHH WLPQNNSTILLLPNPETIPRDSRYDQLHTFGFRLSNKTTSDKKAKIPFDFSIEYAIQNGK HCCCCCCEEEEECCCCCCCCCCCCCHHHHEEEEECCCCCCCCCEECCCCEEEEEEEECCC NGLNVTPNWDILNTNVSTVDPLTGKTVTNSIYKEKQSYDAYAFAFDIGYTIGPFRFGGIY CCCCCCCCCEEEECCCCCCCCCCCCHHHHHHHHHHHCCCEEEEEEECCCEECCEECCCEE DIGSGDPNRKDGKVATFSNLFHSNHGFFGEADQVSWVNMVGKSVNFTWDGGKFGKLKIAY ECCCCCCCCCCCCEEEHHHHHHCCCCCCCCCCCCHHHHHCCCCEEEEECCCCCCEEEEEE WIIDKQKRQDGWYDVTGNLKEGASTESATNERFKDPYVQSEKGALDQRGVVTLGKNLFRE EEEECHHCCCCCEEECCCCCCCCCCCCCCHHHCCCCCCCCCCCCCCCCCHHHHHHHHHHH IDMIYSFEYNHILWSFGGSWIFAGDAVRRKLNDDSIYPEFRKTNFLPQAQFGYLMMTVQF HHHHEEEECCEEEEECCCCEEEECHHHHHHCCCCCCCCCHHHCCCCCCCCCCEEEEEEEC >Mature Secondary Structure MKTYKLSIIQLLLIFIVFLFSEIDAKKTRRAKRPKVRNTATQRIQQPIEVQKQKADTQII CCEEHHHHHHHHHHHHHHHHHHCCHHHHHHHCCCCHHHHHHHHHHCCHHHHHHHCCCEEE PIETEIKELKKDTPWYESVKLGGLIRIRPEARYNYDFDKFKNDNISFVGAKAQIWIEKEF ECHHHHHHHHCCCCCHHCEEECCEEEECCCCCCCCCHHHCCCCCEEEEEEEEEEEEEHHH TQNMKARIVLQDSALWGGEKGSIIGIDTANDNTRQSVGIREAWVESKELIGPVTLQAGRQ CCCCEEEEEEEECCCCCCCCCCEEEEECCCCCCHHHCCHHHHHHHHHHHCCCEEHHHHHH ILKYGDERLVGALEWNNVGRSFNGFRLKIDKELFSTHAWVMIVGEQDSDVAGNSTNLGKR HHHCCCCCEEEEEEECCCCCCCCCEEEEEEHHHHCCCEEEEEECCCCCCCCCCCCCCCCC NSFPIQYNCPPNSFSSSACTLTTELSKQQQGDATFTGFYNTFKPSDLLHIDAYYIGLYKK CCCCEEECCCCCCCCCCEEEEEEHHHHHCCCCEEEEECCCCCCCCCEEEEEHHEEEHHHH WLPQNNSTILLLPNPETIPRDSRYDQLHTFGFRLSNKTTSDKKAKIPFDFSIEYAIQNGK HCCCCCCEEEEECCCCCCCCCCCCCHHHHEEEEECCCCCCCCCEECCCCEEEEEEEECCC NGLNVTPNWDILNTNVSTVDPLTGKTVTNSIYKEKQSYDAYAFAFDIGYTIGPFRFGGIY CCCCCCCCCEEEECCCCCCCCCCCCHHHHHHHHHHHCCCEEEEEEECCCEECCEECCCEE DIGSGDPNRKDGKVATFSNLFHSNHGFFGEADQVSWVNMVGKSVNFTWDGGKFGKLKIAY ECCCCCCCCCCCCEEEHHHHHHCCCCCCCCCCCCHHHHHCCCCEEEEECCCCCCEEEEEE WIIDKQKRQDGWYDVTGNLKEGASTESATNERFKDPYVQSEKGALDQRGVVTLGKNLFRE EEEECHHCCCCCEEECCCCCCCCCCCCCCHHHCCCCCCCCCCCCCCCCCHHHHHHHHHHH IDMIYSFEYNHILWSFGGSWIFAGDAVRRKLNDDSIYPEFRKTNFLPQAQFGYLMMTVQF HHHHEEEECCEEEEECCCCEEEECHHHHHHCCCCCCCCCHHHCCCCCCCCCCEEEEEEEC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA