Click here to switch to the map view.

The map label for this gene is 116329353

Identifier: 116329353

GI number: 116329353

Start: 3329036

End: 3330043

Strand: Direct

Name: 116329353

Synonym: LBL_2804

Alternate gene names: NA

Gene position: 3329036-3330043 (Clockwise)

Preceding gene: 116329351

Following gene: 116329354

Centisome position: 92.1

GC content: 40.48

Gene sequence:

>1008_bases
ATGTCTTGGAAGAAATTAGCCCAATGCTTGCTTATTCTCTTGCTATGTCACAACGTGAATGCATATCAAGAAGACGGACA
TTTTTATACCGTCCAAACCGTTTTAAATAACTTTCAGTCTTCTTCTCCTTTAACCAAAGAGGAAATCGCCCTTATCGCTT
TTTGCACTCAACTTCCGGACGAAGTCCCCGAATTGGATGCGATTTCGGTGTACCAAAAGCTGGCTTTTAAATATCCTTTC
GATTACATACTTTGGGTTCTTAAAAGCCAAGGTTCGCCGAAAGTTCTGGGGAGAATGGCCGAGATACAACAGTTGTTACA
CGGTTTAACCGGTGGAAACAGCGAACATCTTCGTAACGTAGCCGTCACAACCTTGGATCGACTGCGCACAAAACTTGCTT
TCAAAAAGGAAAGACTTCCGGAAAGATTATGCGCGTTGGGTTTCGCTTTTCATTTGTTAGGAGATTCATTCGCACATCGT
AAATTGTTAAATCCTAAAAAAATGTACCCTACGGGAAGAGGACACGCTTCCGATATGACCTTGCCCGACCACCCGGTTTA
CAACGATGATCGTGTTGTCGAATGGGAAAATTATGCGAAGAATATTCCGAATTTATTTCGTTCCGATTTGAAGGAAGTTG
TAATTAAGGAAGATTTTAGAAAAATAAGAGAGCTTACCGGAAATAACTATCCTTGGCATTGTATTTTCGGAACAAAATGC
GAGGACAGACTTAGAAAAATCCTATTACATCGATTGAAAGAATCTGACTCTTTTCCAAAATACAATCCCTTACAGAAAGA
ACGTTATCCCGCTTCTAATTGTCAAGAATACGTTCAAAGGGTAGTCGAACAAAAGGACATTCCACACGTTCCGGATTGTG
GTAAGTCTTGGAAAATTTACAAACAAGCTTCCCTGGAAGTTTGGAAAGATCTCGGTTATTTCCAAGACCAAAAATCCCGT
AAACAAATCGAACTCTATGACGGAGACGACTTATGGCAGAATCCTTAA

Upstream 100 bases:

>100_bases
ATTCTTTGCTTCAAACTTATTTCAAAAAATGCCAAGAAAACCACCAAAAAGAGAAACAATTGTTGCAATTGTTGTTTAAA
AAAGCATTCATTGTCGATCT

Downstream 100 bases:

>100_bases
GGGAAGAACATCCTCGAAAAAAAAGAAAAAGAAAAGTTAAGAAGAAATCGATTTGGGGAGAAATTCTTATCGTATTCGCG
GGTTTTCCGATTTTAATCAC

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 335; Mature: 334

Protein sequence:

>335_residues
MSWKKLAQCLLILLLCHNVNAYQEDGHFYTVQTVLNNFQSSSPLTKEEIALIAFCTQLPDEVPELDAISVYQKLAFKYPF
DYILWVLKSQGSPKVLGRMAEIQQLLHGLTGGNSEHLRNVAVTTLDRLRTKLAFKKERLPERLCALGFAFHLLGDSFAHR
KLLNPKKMYPTGRGHASDMTLPDHPVYNDDRVVEWENYAKNIPNLFRSDLKEVVIKEDFRKIRELTGNNYPWHCIFGTKC
EDRLRKILLHRLKESDSFPKYNPLQKERYPASNCQEYVQRVVEQKDIPHVPDCGKSWKIYKQASLEVWKDLGYFQDQKSR
KQIELYDGDDLWQNP

Sequences:

>Translated_335_residues
MSWKKLAQCLLILLLCHNVNAYQEDGHFYTVQTVLNNFQSSSPLTKEEIALIAFCTQLPDEVPELDAISVYQKLAFKYPF
DYILWVLKSQGSPKVLGRMAEIQQLLHGLTGGNSEHLRNVAVTTLDRLRTKLAFKKERLPERLCALGFAFHLLGDSFAHR
KLLNPKKMYPTGRGHASDMTLPDHPVYNDDRVVEWENYAKNIPNLFRSDLKEVVIKEDFRKIRELTGNNYPWHCIFGTKC
EDRLRKILLHRLKESDSFPKYNPLQKERYPASNCQEYVQRVVEQKDIPHVPDCGKSWKIYKQASLEVWKDLGYFQDQKSR
KQIELYDGDDLWQNP
>Mature_334_residues
SWKKLAQCLLILLLCHNVNAYQEDGHFYTVQTVLNNFQSSSPLTKEEIALIAFCTQLPDEVPELDAISVYQKLAFKYPFD
YILWVLKSQGSPKVLGRMAEIQQLLHGLTGGNSEHLRNVAVTTLDRLRTKLAFKKERLPERLCALGFAFHLLGDSFAHRK
LLNPKKMYPTGRGHASDMTLPDHPVYNDDRVVEWENYAKNIPNLFRSDLKEVVIKEDFRKIRELTGNNYPWHCIFGTKCE
DRLRKILLHRLKESDSFPKYNPLQKERYPASNCQEYVQRVVEQKDIPHVPDCGKSWKIYKQASLEVWKDLGYFQDQKSRK
QIELYDGDDLWQNP

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 39132; Mature: 39001

Theoretical pI: Translated: 8.52; Mature: 8.52

Prosite motif: PS00068 MDH

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.4 %Cys     (Translated Protein)
1.2 %Met     (Translated Protein)
3.6 %Cys+Met (Translated Protein)
2.4 %Cys     (Mature Protein)
0.9 %Met     (Mature Protein)
3.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSWKKLAQCLLILLLCHNVNAYQEDGHFYTVQTVLNNFQSSSPLTKEEIALIAFCTQLPD
CCHHHHHHHHHHHHHHHCCCCEECCCCEEEHHHHHHHHHCCCCCCHHHHHHHHHHHHCHH
EVPELDAISVYQKLAFKYPFDYILWVLKSQGSPKVLGRMAEIQQLLHGLTGGNSEHLRNV
CCCCCHHHHHHHHHHHHCCHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHCCCCHHHHHHH
AVTTLDRLRTKLAFKKERLPERLCALGFAFHLLGDSFAHRKLLNPKKMYPTGRGHASDMT
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHCCCCCCCCCCCCC
LPDHPVYNDDRVVEWENYAKNIPNLFRSDLKEVVIKEDFRKIRELTGNNYPWHCIFGTKC
CCCCCCCCCCCEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEECCCH
EDRLRKILLHRLKESDSFPKYNPLQKERYPASNCQEYVQRVVEQKDIPHVPDCGKSWKIY
HHHHHHHHHHHHHHCCCCCCCCCCHHHCCCHHHHHHHHHHHHHHCCCCCCCCCCCCCHHH
KQASLEVWKDLGYFQDQKSRKQIELYDGDDLWQNP
HHHHHHHHHHHCHHHCCCCCCEEEEECCCCCCCCC
>Mature Secondary Structure 
SWKKLAQCLLILLLCHNVNAYQEDGHFYTVQTVLNNFQSSSPLTKEEIALIAFCTQLPD
CHHHHHHHHHHHHHHHCCCCEECCCCEEEHHHHHHHHHCCCCCCHHHHHHHHHHHHCHH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HHHHHHHHHHHCHHHCCCCCCEEEEECCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA