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The map label for this gene is 116329350

Identifier: 116329350

GI number: 116329350

Start: 3326216

End: 3326809

Strand: Direct

Name: 116329350

Synonym: LBL_2801

Alternate gene names: NA

Gene position: 3326216-3326809 (Clockwise)

Preceding gene: 116329349

Following gene: 116329351

Centisome position: 92.03

GC content: 38.38

Gene sequence:

>594_bases
ATGAGATCCGGGGGAGATACAAAGGAAAAAATTGTAACTATTGCTAGAGATTATTTTCAAAGTGTCGGTTTCCAATCGTT
CAGCTTCCAAGATATAGCCAACGATTTAGGAATTAAAAAGGCAAGTATCCACTATTATTACCCTTCTAAAGAGAAATTAG
GCCTTGAAATACTGGAAGCATACGATAAGGACTTCAAAAAATATATAGAAAACATAAGAGAAAGATCTCCCCGCGTTAGA
CTGTTCGGACTTTTTAAACTTTATGTGAGTTACGCCGGTGAAAATGGAAATATTTGCCCGTTCGGCGTCGTGGGCACAGA
ATACCATGTCCTTTCTCAAACGATCCGAGACAAGACCTTGATTCTTCAAAATCAACATCGCGATTTTTTAATACAAACTT
TGTACGACGGGGTAAAGGACGGGTCCTTTGTACTAACTCTCAGTATTCGCGACACCGCCGATTTATTCATCTCCGCAATT
CAAGGGGCAATGCAAATTTCAAGAATCCGAAAGGATAAGGAATATTTTCCGAAAATGATTCAAAGTCTTAAATCGATGAT
ACAAATGAAGGAGCATAAAAATGCAGGTTTCTGA

Upstream 100 bases:

>100_bases
CAAGATCATTTGGTAAGTTTGTAATAAAATACGTTTGTAGATTGTTTCTAGAATGAAATTTTAGATTGACCCACTTACCT
ATCGATAGGTAAGTGGGCTC

Downstream 100 bases:

>100_bases
ATCCACTACAAAAGCATGGGAAGTGATGAACAACTTGTCCGACAAAATGGCCAAAGAGTATAATCTCAGTCTCGAACTTC
CACCAAAATCTTTTAAGGAA

Product: AcrR family transcriptional regulator

Products: NA

Alternate protein names: Transcriptional Regulator TetR Family; AcrR Family Transcriptional Regulator; Transcriptional Regulator; Regulatory Protein Tetr; TetR-Family Transcriptional Regulator; Regulatory Protein TetR; TetR/AcrR Family Transcriptional Regulator; Transcriptional Regulator Protein Tetr Family

Number of amino acids: Translated: 197; Mature: 197

Protein sequence:

>197_residues
MRSGGDTKEKIVTIARDYFQSVGFQSFSFQDIANDLGIKKASIHYYYPSKEKLGLEILEAYDKDFKKYIENIRERSPRVR
LFGLFKLYVSYAGENGNICPFGVVGTEYHVLSQTIRDKTLILQNQHRDFLIQTLYDGVKDGSFVLTLSIRDTADLFISAI
QGAMQISRIRKDKEYFPKMIQSLKSMIQMKEHKNAGF

Sequences:

>Translated_197_residues
MRSGGDTKEKIVTIARDYFQSVGFQSFSFQDIANDLGIKKASIHYYYPSKEKLGLEILEAYDKDFKKYIENIRERSPRVR
LFGLFKLYVSYAGENGNICPFGVVGTEYHVLSQTIRDKTLILQNQHRDFLIQTLYDGVKDGSFVLTLSIRDTADLFISAI
QGAMQISRIRKDKEYFPKMIQSLKSMIQMKEHKNAGF
>Mature_197_residues
MRSGGDTKEKIVTIARDYFQSVGFQSFSFQDIANDLGIKKASIHYYYPSKEKLGLEILEAYDKDFKKYIENIRERSPRVR
LFGLFKLYVSYAGENGNICPFGVVGTEYHVLSQTIRDKTLILQNQHRDFLIQTLYDGVKDGSFVLTLSIRDTADLFISAI
QGAMQISRIRKDKEYFPKMIQSLKSMIQMKEHKNAGF

Specific function: Unknown

COG id: COG1309

COG function: function code K; Transcriptional regulator

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 22735; Mature: 22735

Theoretical pI: Translated: 9.66; Mature: 9.66

Prosite motif: PS50977 HTH_TETR_2

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.5 %Cys     (Translated Protein)
2.5 %Met     (Translated Protein)
3.0 %Cys+Met (Translated Protein)
0.5 %Cys     (Mature Protein)
2.5 %Met     (Mature Protein)
3.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MRSGGDTKEKIVTIARDYFQSVGFQSFSFQDIANDLGIKKASIHYYYPSKEKLGLEILEA
CCCCCCHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHCCCEEEEEEECCCCHHHHHHHHHH
YDKDFKKYIENIRERSPRVRLFGLFKLYVSYAGENGNICPFGVVGTEYHVLSQTIRDKTL
HHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHCCCCCCCCEEECCCCHHHHHHHHHHHHHH
ILQNQHRDFLIQTLYDGVKDGSFVLTLSIRDTADLFISAIQGAMQISRIRKDKEYFPKMI
HECCCCHHHHHHHHHCCCCCCCEEEEEEECHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
QSLKSMIQMKEHKNAGF
HHHHHHHHHHHHCCCCC
>Mature Secondary Structure
MRSGGDTKEKIVTIARDYFQSVGFQSFSFQDIANDLGIKKASIHYYYPSKEKLGLEILEA
CCCCCCHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHCCCEEEEEEECCCCHHHHHHHHHH
YDKDFKKYIENIRERSPRVRLFGLFKLYVSYAGENGNICPFGVVGTEYHVLSQTIRDKTL
HHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHCCCCCCCCEEECCCCHHHHHHHHHHHHHH
ILQNQHRDFLIQTLYDGVKDGSFVLTLSIRDTADLFISAIQGAMQISRIRKDKEYFPKMI
HECCCCHHHHHHHHHCCCCCCCEEEEEEECHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
QSLKSMIQMKEHKNAGF
HHHHHHHHHHHHCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA