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The map label for this gene is slyA [C]

Identifier: 116329340

GI number: 116329340

Start: 3311928

End: 3312377

Strand: Direct

Name: slyA [C]

Synonym: LBL_2789

Alternate gene names: 116329340

Gene position: 3311928-3312377 (Clockwise)

Preceding gene: 116329335

Following gene: 116329341

Centisome position: 91.63

GC content: 43.33

Gene sequence:

>450_bases
ATGAACGAGTTTCAGATCGAAAATACTCTCGGCTATCGAATCAATCGCGGCGCGATCATAATGAAAATCGAGCTTCAGAA
CCGTTTTAAAAACGCAGGTTTTTCAATCACTCCCGAAGAATGGGTTATTCTGAATCGGCTTTGGGAATCGAACGGAATGA
ATCAAAACGAAATCTCACAAAAGACTCTCAAGGACAAGACAACCGTGACCCGCTTTTTGAATGGAATGGAAAAGGATGGT
CTGATCCGAAGGGTAGTGGCCGAGGAAGACCGGCGCAGCAGGCTGATCTTCCTTACCGATAAGGGGAAACTTTTGAAAGA
AAAACTAATACCGATCGCCAAGTCATTGTTAGTTGATTCAAGCACGGAGATAAACAAGGAACATCTGACCGTTACGATGA
ATGTTTTGGCACAGATTGAGAGGAACATTTCAAATCTGAAAGCGAAGTAG

Upstream 100 bases:

>100_bases
CAAAAGATCGAGCGCAAGGTCCGGTTTCGCACCCGATTTAATCTTTTTTTCCAATTCGGAGTTGACCGTTATCATAATTA
GTTGTAATATACAACTAATT

Downstream 100 bases:

>100_bases
AATAATTTAAATTTAATAAAAGAAGGAATGTTGGAATGGAAACTACAACTTTGAAAAAAAATCTAAGCGCGATCGTGGCC
ATGATCTTTATAGTCACGGT

Product: MarR family transcriptional regulator

Products: NA

Alternate protein names: MarR Family Transcriptional Regulator; Transcriptional Regulator; MarR Family Regulatory Protein; Transcriptional Regulator Marr Family; MarR Family Protein; Transcriptional Regulator MarR; MarR Family; Regulatory Protein MarR; Transcriptional Regulator MarR Family Protein; MarR Family Helix-Turn-Helix Transcriptional Regulator

Number of amino acids: Translated: 149; Mature: 149

Protein sequence:

>149_residues
MNEFQIENTLGYRINRGAIIMKIELQNRFKNAGFSITPEEWVILNRLWESNGMNQNEISQKTLKDKTTVTRFLNGMEKDG
LIRRVVAEEDRRSRLIFLTDKGKLLKEKLIPIAKSLLVDSSTEINKEHLTVTMNVLAQIERNISNLKAK

Sequences:

>Translated_149_residues
MNEFQIENTLGYRINRGAIIMKIELQNRFKNAGFSITPEEWVILNRLWESNGMNQNEISQKTLKDKTTVTRFLNGMEKDG
LIRRVVAEEDRRSRLIFLTDKGKLLKEKLIPIAKSLLVDSSTEINKEHLTVTMNVLAQIERNISNLKAK
>Mature_149_residues
MNEFQIENTLGYRINRGAIIMKIELQNRFKNAGFSITPEEWVILNRLWESNGMNQNEISQKTLKDKTTVTRFLNGMEKDG
LIRRVVAEEDRRSRLIFLTDKGKLLKEKLIPIAKSLLVDSSTEINKEHLTVTMNVLAQIERNISNLKAK

Specific function: Transcription Factor That Activates Expression Of Genes Such As Molecular Chaperones (Grol, Gros, Dnak, Grpe, And Cbpa), Proteins Involved In Acid Resistance (Hdea, Hdeb, And Gada), The Starvation Lipoprotein Slp, Virulence Protein Hlye/Clya. Represses Ex

COG id: COG1846

COG function: function code K; Transcriptional regulators

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 17259; Mature: 17259

Theoretical pI: Translated: 10.44; Mature: 10.44

Prosite motif: PS01117 HTH_MARR_1 ; PS50995 HTH_MARR_2

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
3.4 %Met     (Translated Protein)
3.4 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
3.4 %Met     (Mature Protein)
3.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNEFQIENTLGYRINRGAIIMKIELQNRFKNAGFSITPEEWVILNRLWESNGMNQNEISQ
CCCEECCCCCCEEECCCEEEEEEEECHHHCCCCCCCCCHHHHHHHHHHHCCCCCHHHHHH
KTLKDKTTVTRFLNGMEKDGLIRRVVAEEDRRSRLIFLTDKGKLLKEKLIPIAKSLLVDS
HHHHHHHHHHHHHCCCCCCCHHHHHHHCCCCCCEEEEEECCCHHHHHHHHHHHHHHHHCC
STEINKEHLTVTMNVLAQIERNISNLKAK
CCCCCHHHHHHHHHHHHHHHHHHHHCCCC
>Mature Secondary Structure
MNEFQIENTLGYRINRGAIIMKIELQNRFKNAGFSITPEEWVILNRLWESNGMNQNEISQ
CCCEECCCCCCEEECCCEEEEEEEECHHHCCCCCCCCCHHHHHHHHHHHCCCCCHHHHHH
KTLKDKTTVTRFLNGMEKDGLIRRVVAEEDRRSRLIFLTDKGKLLKEKLIPIAKSLLVDS
HHHHHHHHHHHHHCCCCCCCHHHHHHHCCCCCCEEEEEECCCHHHHHHHHHHHHHHHHCC
STEINKEHLTVTMNVLAQIERNISNLKAK
CCCCCHHHHHHHHHHHHHHHHHHHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: DNA [C]

Specific reaction: Protein + DNA = Protein-DNA [C]

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA