| Definition | Leptospira borgpetersenii serovar Hardjo-bovis L550 chromosome 1, complete sequence. |
|---|---|
| Accession | NC_008508 |
| Length | 3,614,446 |
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The map label for this gene is 116329244
Identifier: 116329244
GI number: 116329244
Start: 3176972
End: 3179557
Strand: Direct
Name: 116329244
Synonym: LBL_2683
Alternate gene names: NA
Gene position: 3176972-3179557 (Clockwise)
Preceding gene: 116329243
Following gene: 116329245
Centisome position: 87.9
GC content: 39.64
Gene sequence:
>2586_bases TTGAAGCTTCTTTCCTTTAAATTCCGTTTTTGTTTACTCTTAAGTCTTGTATATTCTCATTCGATTGTCGCTCAAACAAA GCAGGAATTCGGATGGGCAAAAGGTGCGGACGGTTTTTCTTTTAATTTAAACGGAAGAACCGTCTTCCAATCGAATTCTG AAATCGACTCCTTTCCTGAAAATTCAACTCTATTAGAAAAGACTGATTTTCTCTTTCTTGCGGGGGAATATTTCATCTTA AACAAGGACGTTCGTCGTTATGAGTCCCTATTGAACCTGATTACAAACGCAGAATCCGAACTTGTTTTGGGAGGTATTTT TCTAAGAATATTAAAAGAATTGAATTTTAATTCCAAAGAGTCTTCCCGCAGTTTGCTGATTCAGTTTTCCAAGAACGAAA GGTCTTCCTACCTCAAGGAATTGGCAAAAGGTTTTGAATCCGCCGTGTTCGAAAAGAAATCTCCGGAAAATCTTAAATGT TCCAGGAAGGCGGTTTATTATTCCCTTTGTAAAACCCTACGTCTGAAAAAATATCTTTCCGACTTTTCTCCGAAGGCAAA ATCATACCAAAGGGAATATCTGAATCTAAACCGAACGCTTGCTCCGTTCCTCGAAGATCCCGAACTAAAATACATCCCCT TTTTGAGTAATATCATCTACAACATAGCGGATGAACTCGCCGAACTCGGACTTTCCAGAGAAGCGGTTCACTTCCAAAAG ATCCTCATCATTTCCGAAAATTTGAGCGGAAGAGTCGTCGGTTACTCGTATGAGAAACTTGCTTACTATTATTTGATCGG AGGGGATTTTATTTCCGCAGAAAAAGTTTTGGATTACATCCTCAAATATCGTCCCGACTTAAGAACCTCTTACAAAAATC ACTTGTACCTAAAGTTAGGCACCATTGCTTATCTCAATCAGGAATATAAGAAATCTTTGGATTATTATTTGAACTTGGAT TTTTTAGAATGGTCGTCCACGATTTCAAATCCGTTTTTAGGGGAACCGATTTCGATCAATAGTGCGAGGGATTTGATTTC GATGGCGATCTGGAGATCGAAAAATTCCTTTAAAGCGGTCGATGCTCTCAAATCCGTTTCCACTCCGAAGAATTTAACCG AAGACGATTTGTTTACACGACTTAGAATCATACAAATTCTGATGAATGACGAACCCGAGGTCGCGGGAAAGATGGCGACG GAAATCACTTTTTTAGCGCAGAGTAAGGGTTGGAAAAGAGTGGAATATGCCTCCACCTTACTGAATGGATTCATTCATTA CAAAAAAAACGATCTCAGAAAAGCGATCATAGAATTTACGAAAGCGTATGGAATCTTAAAAACCGCGGACCCGGTTTATA CGGAAGAATGGATTCGACTTACCGGTTTATTCTATTCCCATAAGGAATCCAAATCCTTAAGAACCGTGAAAAACGCTTTA GACCAAGCGGTCGCGATTACGATCCACAGAATGCCGGACGACATGCTTCTTCAATTGAAGAATTATCTTCCGGTCGTTTA CGGTGTGAGGGAATTTACGGACGCCGCAATCAACTACTATGCTCTTCACGGACATACGACGGAGCTTCTGGGTTTTTTAT CTCGTTTGGAACAGAAAGAAACGATGGGAAACACGGCGTATCCGAATACTCTCGTTTCCATAATCGACACTAGTCGAAGA ATCTCTTCGTTTCGAGGATTTTATCCCGGACCTAAGGAACGTTTGAGTTCGAGTCGATCCGAAATCCGCAAAACGGAGGT TATGCGACTTTTGGAGGAATTTGATCCGTTTCGAAATCAGGAGATCAAAAAATCCCGTTTACCCGTATTGAGCGTATTTG TAAGAGATAAAAGAACTTATATTTTTTGGAAACCGGGTAATTCTCAGGAATTGGAACTCAAGGAGATTCCTTCCGAATCC GCCTCTTCGTTCACCGTTCAAGTCGTATTAAAATCTTTGATCGAGTCCTTGAATAAAAAAACTAACATTCAAATTTACTT AAACGTTTCCGGAATGGAATCTTTCGATTATCTCAAAAAAGAATTTCCGGACGTAGATTTCAGGTTGTTCACTAAATTCA GTAAAAAGGACGATAAAATTAAATCAGAACGTATTTACGTCTGTGATTGTAAAAACCCGGACCAACTGTCAAGTTCTAAT TTCCAAAAGGTAAGTTTCACACATTTTGAAGGAAATAAGTTACTCGTTGGAAATCGTTCGATGATGGTTTGGAATTTGAA GGTAGAAGACAATTCTCCCGAAAATTTAAACGAATACTCTTGGAGTTGTAGCGAGGAACAGATTCGCTTTTCAAGATTAC ACAGGCGTTACGACTTTAGAAACACCCCGCAACGACTGATCTTTACGAGGGATTCTTTGAGCGGAAACGGCTGGAAAGGA AGGTCGGAAGATTTTTTGGATTGGGTTTCTTTTTGGATCAATTCCGGAGTATATAGAATGTACTACGTTCCATCTTTGAA CTTAAATTCAGAATCGGACATAAACCTTGTGGAAAAACTTTCTCAGGAAACGAACGAACCGGGTACCTCGTTTCATGGAA TTCGAATCCGAAAACACATGGAATGA
Upstream 100 bases:
>100_bases AGTTTATAAAATGCTTTACGAAGACAAGAATCCGAAAGAAGTTGTGAAAGACCTTATGAAACGCGATCTAAAGAGAGAAG GCGTTTTAGTTTGATCGACA
Downstream 100 bases:
>100_bases ATTCGAGAAGCTACATTTTTTCAAAACGTTAGTCCTATAAAATCGAGTGTTTTTTCTTTTAAACGATCGACATTTTTCGA CAATTCAAAGATCCTATCCA
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 861; Mature: 861
Protein sequence:
>861_residues MKLLSFKFRFCLLLSLVYSHSIVAQTKQEFGWAKGADGFSFNLNGRTVFQSNSEIDSFPENSTLLEKTDFLFLAGEYFIL NKDVRRYESLLNLITNAESELVLGGIFLRILKELNFNSKESSRSLLIQFSKNERSSYLKELAKGFESAVFEKKSPENLKC SRKAVYYSLCKTLRLKKYLSDFSPKAKSYQREYLNLNRTLAPFLEDPELKYIPFLSNIIYNIADELAELGLSREAVHFQK ILIISENLSGRVVGYSYEKLAYYYLIGGDFISAEKVLDYILKYRPDLRTSYKNHLYLKLGTIAYLNQEYKKSLDYYLNLD FLEWSSTISNPFLGEPISINSARDLISMAIWRSKNSFKAVDALKSVSTPKNLTEDDLFTRLRIIQILMNDEPEVAGKMAT EITFLAQSKGWKRVEYASTLLNGFIHYKKNDLRKAIIEFTKAYGILKTADPVYTEEWIRLTGLFYSHKESKSLRTVKNAL DQAVAITIHRMPDDMLLQLKNYLPVVYGVREFTDAAINYYALHGHTTELLGFLSRLEQKETMGNTAYPNTLVSIIDTSRR ISSFRGFYPGPKERLSSSRSEIRKTEVMRLLEEFDPFRNQEIKKSRLPVLSVFVRDKRTYIFWKPGNSQELELKEIPSES ASSFTVQVVLKSLIESLNKKTNIQIYLNVSGMESFDYLKKEFPDVDFRLFTKFSKKDDKIKSERIYVCDCKNPDQLSSSN FQKVSFTHFEGNKLLVGNRSMMVWNLKVEDNSPENLNEYSWSCSEEQIRFSRLHRRYDFRNTPQRLIFTRDSLSGNGWKG RSEDFLDWVSFWINSGVYRMYYVPSLNLNSESDINLVEKLSQETNEPGTSFHGIRIRKHME
Sequences:
>Translated_861_residues MKLLSFKFRFCLLLSLVYSHSIVAQTKQEFGWAKGADGFSFNLNGRTVFQSNSEIDSFPENSTLLEKTDFLFLAGEYFIL NKDVRRYESLLNLITNAESELVLGGIFLRILKELNFNSKESSRSLLIQFSKNERSSYLKELAKGFESAVFEKKSPENLKC SRKAVYYSLCKTLRLKKYLSDFSPKAKSYQREYLNLNRTLAPFLEDPELKYIPFLSNIIYNIADELAELGLSREAVHFQK ILIISENLSGRVVGYSYEKLAYYYLIGGDFISAEKVLDYILKYRPDLRTSYKNHLYLKLGTIAYLNQEYKKSLDYYLNLD FLEWSSTISNPFLGEPISINSARDLISMAIWRSKNSFKAVDALKSVSTPKNLTEDDLFTRLRIIQILMNDEPEVAGKMAT EITFLAQSKGWKRVEYASTLLNGFIHYKKNDLRKAIIEFTKAYGILKTADPVYTEEWIRLTGLFYSHKESKSLRTVKNAL DQAVAITIHRMPDDMLLQLKNYLPVVYGVREFTDAAINYYALHGHTTELLGFLSRLEQKETMGNTAYPNTLVSIIDTSRR ISSFRGFYPGPKERLSSSRSEIRKTEVMRLLEEFDPFRNQEIKKSRLPVLSVFVRDKRTYIFWKPGNSQELELKEIPSES ASSFTVQVVLKSLIESLNKKTNIQIYLNVSGMESFDYLKKEFPDVDFRLFTKFSKKDDKIKSERIYVCDCKNPDQLSSSN FQKVSFTHFEGNKLLVGNRSMMVWNLKVEDNSPENLNEYSWSCSEEQIRFSRLHRRYDFRNTPQRLIFTRDSLSGNGWKG RSEDFLDWVSFWINSGVYRMYYVPSLNLNSESDINLVEKLSQETNEPGTSFHGIRIRKHME >Mature_861_residues MKLLSFKFRFCLLLSLVYSHSIVAQTKQEFGWAKGADGFSFNLNGRTVFQSNSEIDSFPENSTLLEKTDFLFLAGEYFIL NKDVRRYESLLNLITNAESELVLGGIFLRILKELNFNSKESSRSLLIQFSKNERSSYLKELAKGFESAVFEKKSPENLKC SRKAVYYSLCKTLRLKKYLSDFSPKAKSYQREYLNLNRTLAPFLEDPELKYIPFLSNIIYNIADELAELGLSREAVHFQK ILIISENLSGRVVGYSYEKLAYYYLIGGDFISAEKVLDYILKYRPDLRTSYKNHLYLKLGTIAYLNQEYKKSLDYYLNLD FLEWSSTISNPFLGEPISINSARDLISMAIWRSKNSFKAVDALKSVSTPKNLTEDDLFTRLRIIQILMNDEPEVAGKMAT EITFLAQSKGWKRVEYASTLLNGFIHYKKNDLRKAIIEFTKAYGILKTADPVYTEEWIRLTGLFYSHKESKSLRTVKNAL DQAVAITIHRMPDDMLLQLKNYLPVVYGVREFTDAAINYYALHGHTTELLGFLSRLEQKETMGNTAYPNTLVSIIDTSRR ISSFRGFYPGPKERLSSSRSEIRKTEVMRLLEEFDPFRNQEIKKSRLPVLSVFVRDKRTYIFWKPGNSQELELKEIPSES ASSFTVQVVLKSLIESLNKKTNIQIYLNVSGMESFDYLKKEFPDVDFRLFTKFSKKDDKIKSERIYVCDCKNPDQLSSSN FQKVSFTHFEGNKLLVGNRSMMVWNLKVEDNSPENLNEYSWSCSEEQIRFSRLHRRYDFRNTPQRLIFTRDSLSGNGWKG RSEDFLDWVSFWINSGVYRMYYVPSLNLNSESDINLVEKLSQETNEPGTSFHGIRIRKHME
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 100117; Mature: 100117
Theoretical pI: Translated: 9.39; Mature: 9.39
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.7 %Cys (Translated Protein) 1.5 %Met (Translated Protein) 2.2 %Cys+Met (Translated Protein) 0.7 %Cys (Mature Protein) 1.5 %Met (Mature Protein) 2.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKLLSFKFRFCLLLSLVYSHSIVAQTKQEFGWAKGADGFSFNLNGRTVFQSNSEIDSFPE CCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCEEEECCCEEEEECCCCCCCCCC NSTLLEKTDFLFLAGEYFILNKDVRRYESLLNLITNAESELVLGGIFLRILKELNFNSKE CCCCHHHCCEEEEECCEEEECHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHCCCCCCC SSRSLLIQFSKNERSSYLKELAKGFESAVFEKKSPENLKCSRKAVYYSLCKTLRLKKYLS CCCEEEEEECCCHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHH DFSPKAKSYQREYLNLNRTLAPFLEDPELKYIPFLSNIIYNIADELAELGLSREAVHFQK HCCCHHHHHHHHHHHCCCCHHCCCCCCCCEEHHHHHHHHHHHHHHHHHCCCCCHHHHEEE ILIISENLSGRVVGYSYEKLAYYYLIGGDFISAEKVLDYILKYRPDLRTSYKNHLYLKLG EEEEECCCCCCEEEEEHHHEEEEEEECCCCCCHHHHHHHHHHCCCCHHHCCCCEEEEEEC TIAYLNQEYKKSLDYYLNLDFLEWSSTISNPFLGEPISINSARDLISMAIWRSKNSFKAV HHHHHHHHHHHCCCCEEEEEEEHHHHHCCCCCCCCCCCCCHHHHHHHHHHHCCCCCHHHH DALKSVSTPKNLTEDDLFTRLRIIQILMNDEPEVAGKMATEITFLAQSKGWKRVEYASTL HHHHHCCCCCCCCHHHHHHHHHHHHHHHCCCCHHHHHHHHHEEEEECCCCCCHHHHHHHH LNGFIHYKKNDLRKAIIEFTKAYGILKTADPVYTEEWIRLTGLFYSHKESKSLRTVKNAL HHHHHHHCHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHCCCCHHHHHHHHHHH DQAVAITIHRMPDDMLLQLKNYLPVVYGVREFTDAAINYYALHGHTTELLGFLSRLEQKE HHEEEEEEECCCHHHHHHHHHCCHHHHHHHHHHHHHHEEEEECCCHHHHHHHHHHHHHHH TMGNTAYPNTLVSIIDTSRRISSFRGFYPGPKERLSSSRSEIRKTEVMRLLEEFDPFRNQ HCCCCCCCHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCC EIKKSRLPVLSVFVRDKRTYIFWKPGNSQELELKEIPSESASSFTVQVVLKSLIESLNKK HHHHHCCCEEEEEEECCCEEEEECCCCCCCEEHHHCCCCCCCHHHHHHHHHHHHHHCCCC TNIQIYLNVSGMESFDYLKKEFPDVDFRLFTKFSKKDDKIKSERIYVCDCKNPDQLSSSN CCEEEEEEECCCCHHHHHHHHCCCCCHHHHHHHCCCCCCCCCCEEEEEECCCCCCCCCCC FQKVSFTHFEGNKLLVGNRSMMVWNLKVEDNSPENLNEYSWSCSEEQIRFSRLHRRYDFR CCEEEEEEECCCEEEEECCEEEEEEEEECCCCCCCCCCCCCCCCHHHHHHHHHHHHCCCC NTPQRLIFTRDSLSGNGWKGRSEDFLDWVSFWINSGVYRMYYVPSLNLNSESDINLVEKL CCCCCEEEEECCCCCCCCCCCCHHHHHHHHHHHCCCEEEEEEEECCCCCCCCCHHHHHHH SQETNEPGTSFHGIRIRKHME HHHCCCCCCCCCCEEEEECCC >Mature Secondary Structure MKLLSFKFRFCLLLSLVYSHSIVAQTKQEFGWAKGADGFSFNLNGRTVFQSNSEIDSFPE CCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCEEEECCCEEEEECCCCCCCCCC NSTLLEKTDFLFLAGEYFILNKDVRRYESLLNLITNAESELVLGGIFLRILKELNFNSKE CCCCHHHCCEEEEECCEEEECHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHCCCCCCC SSRSLLIQFSKNERSSYLKELAKGFESAVFEKKSPENLKCSRKAVYYSLCKTLRLKKYLS CCCEEEEEECCCHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHH DFSPKAKSYQREYLNLNRTLAPFLEDPELKYIPFLSNIIYNIADELAELGLSREAVHFQK HCCCHHHHHHHHHHHCCCCHHCCCCCCCCEEHHHHHHHHHHHHHHHHHCCCCCHHHHEEE ILIISENLSGRVVGYSYEKLAYYYLIGGDFISAEKVLDYILKYRPDLRTSYKNHLYLKLG EEEEECCCCCCEEEEEHHHEEEEEEECCCCCCHHHHHHHHHHCCCCHHHCCCCEEEEEEC TIAYLNQEYKKSLDYYLNLDFLEWSSTISNPFLGEPISINSARDLISMAIWRSKNSFKAV HHHHHHHHHHHCCCCEEEEEEEHHHHHCCCCCCCCCCCCCHHHHHHHHHHHCCCCCHHHH DALKSVSTPKNLTEDDLFTRLRIIQILMNDEPEVAGKMATEITFLAQSKGWKRVEYASTL HHHHHCCCCCCCCHHHHHHHHHHHHHHHCCCCHHHHHHHHHEEEEECCCCCCHHHHHHHH LNGFIHYKKNDLRKAIIEFTKAYGILKTADPVYTEEWIRLTGLFYSHKESKSLRTVKNAL HHHHHHHCHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHCCCCHHHHHHHHHHH DQAVAITIHRMPDDMLLQLKNYLPVVYGVREFTDAAINYYALHGHTTELLGFLSRLEQKE HHEEEEEEECCCHHHHHHHHHCCHHHHHHHHHHHHHHEEEEECCCHHHHHHHHHHHHHHH TMGNTAYPNTLVSIIDTSRRISSFRGFYPGPKERLSSSRSEIRKTEVMRLLEEFDPFRNQ HCCCCCCCHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCC EIKKSRLPVLSVFVRDKRTYIFWKPGNSQELELKEIPSESASSFTVQVVLKSLIESLNKK HHHHHCCCEEEEEEECCCEEEEECCCCCCCEEHHHCCCCCCCHHHHHHHHHHHHHHCCCC TNIQIYLNVSGMESFDYLKKEFPDVDFRLFTKFSKKDDKIKSERIYVCDCKNPDQLSSSN CCEEEEEEECCCCHHHHHHHHCCCCCHHHHHHHCCCCCCCCCCEEEEEECCCCCCCCCCC FQKVSFTHFEGNKLLVGNRSMMVWNLKVEDNSPENLNEYSWSCSEEQIRFSRLHRRYDFR CCEEEEEEECCCEEEEECCEEEEEEEEECCCCCCCCCCCCCCCCHHHHHHHHHHHHCCCC NTPQRLIFTRDSLSGNGWKGRSEDFLDWVSFWINSGVYRMYYVPSLNLNSESDINLVEKL CCCCCEEEEECCCCCCCCCCCCHHHHHHHHHHHCCCEEEEEEEECCCCCCCCCHHHHHHH SQETNEPGTSFHGIRIRKHME HHHCCCCCCCCCCEEEEECCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA