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The map label for this gene is trkA [H]

Identifier: 116329225

GI number: 116329225

Start: 3154403

End: 3155122

Strand: Reverse

Name: trkA [H]

Synonym: LBL_2662

Alternate gene names: 116329225

Gene position: 3155122-3154403 (Counterclockwise)

Preceding gene: 116329226

Following gene: 116329221

Centisome position: 87.29

GC content: 41.39

Gene sequence:

>720_bases
ATGGCGGTCAAAAAGAAAAATAAAACCCTCAAAAAAAGAATCGCCGTTATCGGTTTGGGGGATTTCGGCAAAACTCTGGT
GATCTATTTGAACGAGAACGGGCACGAGGTGACGGCGATAGACAAGGACATAAAGATTGTCGAAGAAATCAAGGATCATT
GTGCTCTTGCCGTTTGTGTGGATACGAGCAGTAGATCCTCGTTGGAAGAGTTGGATCTAGAAGACATGGACGAGATCGTT
GTAGCTCTCGCGGAAAATTTCGAATCTCTGATCACTACTGCATACAATTTGAAAGATATGAATTTAAAATGTCTACATGT
TCGTTATCATTCCGAATTGAATCGTAAAATTCTTCAGATGATCGGGATTGATAATCTGTTCAATCCCGAAGAAAGGGCGG
CCGCTTCCATGGCGGAACAACTCAGTTATCAAGGGGTAAAAAAAGCGACCTTGTTAAGCGAAGAATACAGTCTTTTCGAA
GTGGAAATTTCTCCTCTTCTTTACGGTAAAAAATTAAGAGAACTCAGGCTAAGGGAAAAGTTTCAGATCAATCTGGTTGG
AATCAGAAAGGCGGAATCAAACGGAAACGATTCGGAACCCCAAGAAGGTGGTGTTTTTCTCCCGGATTCCAGAACGGTAT
TTAGAGAGAAGGAAATTTTGATTCTGTTTGGAAGTTCCGAAAGTATCAAACGTTTTACGAGCGCTTACCACATCGAATAA

Upstream 100 bases:

>100_bases
GGAATGTTAACCATACTGATCGCTTTGGTTCCGAAGGAAAAAAAATCCAGACTTAAATTTCCGGAAGAATCGATCATAGT
CGGTTGAGAGGAGGAGTGTT

Downstream 100 bases:

>100_bases
GGAATCTTTGAAAATAAATCAAAGATGTCTTAAGGGAACCTCTATCAAATAGATTTTGGGATTTTACATCCGAGTGGATT
TCGTGGAGTTTATTTTTTGA

Product: potassium uptake system, NAD-binding component

Products: NA

Alternate protein names: K(+)-uptake protein ktrC; ORF4 [H]

Number of amino acids: Translated: 239; Mature: 238

Protein sequence:

>239_residues
MAVKKKNKTLKKRIAVIGLGDFGKTLVIYLNENGHEVTAIDKDIKIVEEIKDHCALAVCVDTSSRSSLEELDLEDMDEIV
VALAENFESLITTAYNLKDMNLKCLHVRYHSELNRKILQMIGIDNLFNPEERAAASMAEQLSYQGVKKATLLSEEYSLFE
VEISPLLYGKKLRELRLREKFQINLVGIRKAESNGNDSEPQEGGVFLPDSRTVFREKEILILFGSSESIKRFTSAYHIE

Sequences:

>Translated_239_residues
MAVKKKNKTLKKRIAVIGLGDFGKTLVIYLNENGHEVTAIDKDIKIVEEIKDHCALAVCVDTSSRSSLEELDLEDMDEIV
VALAENFESLITTAYNLKDMNLKCLHVRYHSELNRKILQMIGIDNLFNPEERAAASMAEQLSYQGVKKATLLSEEYSLFE
VEISPLLYGKKLRELRLREKFQINLVGIRKAESNGNDSEPQEGGVFLPDSRTVFREKEILILFGSSESIKRFTSAYHIE
>Mature_238_residues
AVKKKNKTLKKRIAVIGLGDFGKTLVIYLNENGHEVTAIDKDIKIVEEIKDHCALAVCVDTSSRSSLEELDLEDMDEIVV
ALAENFESLITTAYNLKDMNLKCLHVRYHSELNRKILQMIGIDNLFNPEERAAASMAEQLSYQGVKKATLLSEEYSLFEV
EISPLLYGKKLRELRLREKFQINLVGIRKAESNGNDSEPQEGGVFLPDSRTVFREKEILILFGSSESIKRFTSAYHIE

Specific function: Catalytic subunit of the KtrCD potassium uptake transporter. The 2 major potassium transporter complexes KtrAB and KtrCD confer resistance to both suddenly imposed and prolonged osmotic stress [H]

COG id: COG0569

COG function: function code P; K+ transport systems, NAD-binding component

Gene ontology:

Cell location: Cell membrane; Peripheral membrane protein; Cytoplasmic side [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Contains 1 RCK N-terminal domain [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR016040
- InterPro:   IPR006037
- InterPro:   IPR003148 [H]

Pfam domain/function: PF02080 TrkA_C; PF02254 TrkA_N [H]

EC number: NA

Molecular weight: Translated: 27115; Mature: 26983

Theoretical pI: Translated: 5.47; Mature: 5.47

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.3 %Cys     (Translated Protein)
2.1 %Met     (Translated Protein)
3.3 %Cys+Met (Translated Protein)
1.3 %Cys     (Mature Protein)
1.7 %Met     (Mature Protein)
2.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MAVKKKNKTLKKRIAVIGLGDFGKTLVIYLNENGHEVTAIDKDIKIVEEIKDHCALAVCV
CCCCCCCHHHHHEEEEEEECCCCCEEEEEECCCCCEEEEECHHHHHHHHHHHCCEEEEEE
DTSSRSSLEELDLEDMDEIVVALAENFESLITTAYNLKDMNLKCLHVRYHSELNRKILQM
ECCCCCHHHHCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEEEEHHHHHHHHHHHH
IGIDNLFNPEERAAASMAEQLSYQGVKKATLLSEEYSLFEVEISPLLYGKKLRELRLREK
HCCCCCCCHHHHHHHHHHHHHHHCCCHHHHHHHCCCEEEEEEECHHHHHHHHHHHHHCHH
FQINLVGIRKAESNGNDSEPQEGGVFLPDSRTVFREKEILILFGSSESIKRFTSAYHIE
EEEEEEEEEECCCCCCCCCCCCCCEECCCCCCEEECCEEEEEECCCHHHHHHHHHHCCC
>Mature Secondary Structure 
AVKKKNKTLKKRIAVIGLGDFGKTLVIYLNENGHEVTAIDKDIKIVEEIKDHCALAVCV
CCCCCCHHHHHEEEEEEECCCCCEEEEEECCCCCEEEEECHHHHHHHHHHHCCEEEEEE
DTSSRSSLEELDLEDMDEIVVALAENFESLITTAYNLKDMNLKCLHVRYHSELNRKILQM
ECCCCCHHHHCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEEEEHHHHHHHHHHHH
IGIDNLFNPEERAAASMAEQLSYQGVKKATLLSEEYSLFEVEISPLLYGKKLRELRLREK
HCCCCCCCHHHHHHHHHHHHHHHCCCHHHHHHHCCCEEEEEEECHHHHHHHHHHHHHCHH
FQINLVGIRKAESNGNDSEPQEGGVFLPDSRTVFREKEILILFGSSESIKRFTSAYHIE
EEEEEEEEEECCCCCCCCCCCCCCEECCCCCCEEECCEEEEEECCCHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 8969500; 9384377 [H]