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The map label for this gene is 116329221

Identifier: 116329221

GI number: 116329221

Start: 3152229

End: 3152660

Strand: Reverse

Name: 116329221

Synonym: LBL_2658

Alternate gene names: NA

Gene position: 3152660-3152229 (Counterclockwise)

Preceding gene: 116329225

Following gene: 116329213

Centisome position: 87.22

GC content: 38.66

Gene sequence:

>432_bases
ATGCAATTACGTAAGAAGATTTCGCGTTCCCGTATTTTCCATGAAAAGGACTTTGAGATCAAAGCTTCGTCGATTCCTGG
GATCGGGATGGGGCTTTTCCCGAAAGAAAACGTAAACAAAGCTGATACTATCGGATATTATACCGGTAGAATTCTTACTG
ATAAAATTGCAAACTCTTCCAAATACTGCGAATCAAAATATTTACTTTGGATTTGTAAGGATCATTGGATTTACGGAGAG
GGAAAAGAAAGTAATTATACTCGTTTTATGAATCATAGTTCTAAGCCGAACGTAAAACTTGTCGTATCCGTTCGTTGGAA
AACGGCGAGATTCGAAGCGATCCGAAAAATAAAAGCGGGAGAAGAATTATTTTTCGATTACGGTGATGAGTATTGGGTCA
ATACGGACATCGACCCGGTGGAAAGAAACTAA

Upstream 100 bases:

>100_bases
TTCTTTTAAGATGGGAGTTCAGAATTCAGTTGCAAATTTTATACTCTTTTGGGAATGATAGCATAAATTCTGTTCGTATT
CAGGAGTTTTAGTTTCAACG

Downstream 100 bases:

>100_bases
AAGCCCGTTTCAAAGTTTTAGTGTGGGAATAGATGTTAGCGGACGGTTCCGACTTTGTTCTTTTTTGCCCACATGCGTGG
GATTAATATAAAGTCCTAAT

Product: lysine methyltransferase

Products: NA

Alternate protein names: SET Domain-Containing Protein; Nuclear Protein SET

Number of amino acids: Translated: 143; Mature: 143

Protein sequence:

>143_residues
MQLRKKISRSRIFHEKDFEIKASSIPGIGMGLFPKENVNKADTIGYYTGRILTDKIANSSKYCESKYLLWICKDHWIYGE
GKESNYTRFMNHSSKPNVKLVVSVRWKTARFEAIRKIKAGEELFFDYGDEYWVNTDIDPVERN

Sequences:

>Translated_143_residues
MQLRKKISRSRIFHEKDFEIKASSIPGIGMGLFPKENVNKADTIGYYTGRILTDKIANSSKYCESKYLLWICKDHWIYGE
GKESNYTRFMNHSSKPNVKLVVSVRWKTARFEAIRKIKAGEELFFDYGDEYWVNTDIDPVERN
>Mature_143_residues
MQLRKKISRSRIFHEKDFEIKASSIPGIGMGLFPKENVNKADTIGYYTGRILTDKIANSSKYCESKYLLWICKDHWIYGE
GKESNYTRFMNHSSKPNVKLVVSVRWKTARFEAIRKIKAGEELFFDYGDEYWVNTDIDPVERN

Specific function: Unknown

COG id: COG2940

COG function: function code R; Proteins containing SET domain

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 16798; Mature: 16798

Theoretical pI: Translated: 9.66; Mature: 9.66

Prosite motif: PS50280 SET

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.4 %Cys     (Translated Protein)
2.1 %Met     (Translated Protein)
3.5 %Cys+Met (Translated Protein)
1.4 %Cys     (Mature Protein)
2.1 %Met     (Mature Protein)
3.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MQLRKKISRSRIFHEKDFEIKASSIPGIGMGLFPKENVNKADTIGYYTGRILTDKIANSS
CCHHHHHHHHHCCCCCCCEEEECCCCCCCCCCCCCCCCCCCCCCEEEECEEEEHHHCCCC
KYCESKYLLWICKDHWIYGEGKESNYTRFMNHSSKPNVKLVVSVRWKTARFEAIRKIKAG
CCCCCEEEEEEEECCEEECCCCCCCCEEEECCCCCCCEEEEEEEECCHHHHHHHHHHCCC
EELFFDYGDEYWVNTDIDPVERN
CEEEEECCCCEEECCCCCCCCCC
>Mature Secondary Structure
MQLRKKISRSRIFHEKDFEIKASSIPGIGMGLFPKENVNKADTIGYYTGRILTDKIANSS
CCHHHHHHHHHCCCCCCCEEEECCCCCCCCCCCCCCCCCCCCCCEEEECEEEEHHHCCCC
KYCESKYLLWICKDHWIYGEGKESNYTRFMNHSSKPNVKLVVSVRWKTARFEAIRKIKAG
CCCCCEEEEEEEECCEEECCCCCCCCEEEECCCCCCCEEEEEEEECCHHHHHHHHHHCCC
EELFFDYGDEYWVNTDIDPVERN
CEEEEECCCCEEECCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA