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The map label for this gene is dsbD [C]

Identifier: 116329178

GI number: 116329178

Start: 3081276

End: 3082274

Strand: Reverse

Name: dsbD [C]

Synonym: LBL_2605

Alternate gene names: 116329178

Gene position: 3082274-3081276 (Counterclockwise)

Preceding gene: 116329181

Following gene: 116329170

Centisome position: 85.28

GC content: 36.04

Gene sequence:

>999_bases
ATGATAAAGAAAAACCTCTCGAATTTTCCCGCCCCTCCATCCAAAATGAGGATAGGGCCGAATTATCACAGTGAGCTGTC
GTATTTACGACGGGATCTATTTTCGGATTCAAATAATTTATGGGTAAAGTCGAAGTTGCGGCTTTTTAAACGTAACACAA
CATTTTCTCTTAGGTATGTTCGATTTTTATCTTTTTCAACTTCCGTTTTGTTTTGTGTAATTTTCTGTTTGCCGATTTCG
GCTGAAATTCAATGGGAAAAATCCGTCAAGACCGCTTTTGAAAAAGCAAAAATCAACGGAAAACCGATTTTTATCGATGT
TTATGCGGATTGGTGTGGTTACTGCAAGATTTTGAAAAATGAGATCTATCCTAAAAAAGAAGTTCAACTAGAACTTTCTA
AGTTCGTTACACTTTCTTTAGACGGTGATACCTTTCCGAATTTAAAACGTAAATACGGGATCAAAGGCTATCCCTCGATT
CTTTTTTTGGATCAGAATGGAAGTCTCATCGATAAAATTACCGGGATGCCGGATTCCAAAATGATTCTCAAATATTTGAA
AAACGCATACGCTCATAGAAACTTAGAGAAAGAATATCTTGAAAAATTAGCCAAAGATCCAAACGGGATTAAGACCAACT
TTCAAGCGGGAGTTTATTATTTCGAAGCGAAAGAATATACAAAAGCAATTCAATTTTTTCGGAAAGTAATCGATGCAAAC
GATACAAAGAATACGGATAAAAAACACGACGCATTGTTTAATTTGGGGATTTCTTATTTAGAAGTCGGGAATTTTAAGTT
CGCAATTGCCACTTTTAATTCGTATATTTCCAGATATCCGAACGGGGATCTATCTTCGATCCTTTACTTTCGGGCAAACG
CATACGAAGAATTGAATCGAAAAGAAGAAGCAAAGGCCGATTACAAAAAGGTTCTAGAACTAACAGTTGACCCGGAAGAA
AAAAGGGACCTTCAATTTAGGATCGATTCCTTGAATTAA

Upstream 100 bases:

>100_bases
TCGGGGGTGAAAAACTTACTAGAACTTTACATCTCCGATCAGTCATTCAAACGTGGAGTTCCCACAATGGAGCGACTTTT
ATTTGTAAATGTATGATTTT

Downstream 100 bases:

>100_bases
AATATTTTAATATTCTATTTTAATTGTATCTAACTCGTGTCGATTGTATACGAGTTCTTTTATGTAATTAATCTTTTAAA
AAAGCGATCCCCCAATCTCT

Product: thioredoxin domain-containing protein

Products: DsbDoxidized; DsbGreduced [C]

Alternate protein names: Thiol-Disulfide Interchange Protein DsbD-Like Protein; Cytochrome C Biogenesis Protein Transmembrane Region; Thiol Disulfide Interchange Protein DsbD Like Protein; Thiol-Disulfide Interchange Like Protein; Thioredoxin Domain-Containing Protein; TPR Repeat-Containing Protein; ThiolDisulfide Interchange Protein Dsbd; Protein-Disulfide Reductase; Thioredoxin DomaiN-Containing Protein

Number of amino acids: Translated: 332; Mature: 332

Protein sequence:

>332_residues
MIKKNLSNFPAPPSKMRIGPNYHSELSYLRRDLFSDSNNLWVKSKLRLFKRNTTFSLRYVRFLSFSTSVLFCVIFCLPIS
AEIQWEKSVKTAFEKAKINGKPIFIDVYADWCGYCKILKNEIYPKKEVQLELSKFVTLSLDGDTFPNLKRKYGIKGYPSI
LFLDQNGSLIDKITGMPDSKMILKYLKNAYAHRNLEKEYLEKLAKDPNGIKTNFQAGVYYFEAKEYTKAIQFFRKVIDAN
DTKNTDKKHDALFNLGISYLEVGNFKFAIATFNSYISRYPNGDLSSILYFRANAYEELNRKEEAKADYKKVLELTVDPEE
KRDLQFRIDSLN

Sequences:

>Translated_332_residues
MIKKNLSNFPAPPSKMRIGPNYHSELSYLRRDLFSDSNNLWVKSKLRLFKRNTTFSLRYVRFLSFSTSVLFCVIFCLPIS
AEIQWEKSVKTAFEKAKINGKPIFIDVYADWCGYCKILKNEIYPKKEVQLELSKFVTLSLDGDTFPNLKRKYGIKGYPSI
LFLDQNGSLIDKITGMPDSKMILKYLKNAYAHRNLEKEYLEKLAKDPNGIKTNFQAGVYYFEAKEYTKAIQFFRKVIDAN
DTKNTDKKHDALFNLGISYLEVGNFKFAIATFNSYISRYPNGDLSSILYFRANAYEELNRKEEAKADYKKVLELTVDPEE
KRDLQFRIDSLN
>Mature_332_residues
MIKKNLSNFPAPPSKMRIGPNYHSELSYLRRDLFSDSNNLWVKSKLRLFKRNTTFSLRYVRFLSFSTSVLFCVIFCLPIS
AEIQWEKSVKTAFEKAKINGKPIFIDVYADWCGYCKILKNEIYPKKEVQLELSKFVTLSLDGDTFPNLKRKYGIKGYPSI
LFLDQNGSLIDKITGMPDSKMILKYLKNAYAHRNLEKEYLEKLAKDPNGIKTNFQAGVYYFEAKEYTKAIQFFRKVIDAN
DTKNTDKKHDALFNLGISYLEVGNFKFAIATFNSYISRYPNGDLSSILYFRANAYEELNRKEEAKADYKKVLELTVDPEE
KRDLQFRIDSLN

Specific function: Required To Facilitate The Formation Of Correct Disulfide Bonds In Some Periplasmic Proteins And For The Assembly Of The Periplasmic C-Type Cytochromes. Acts By Transferring Electrons From Cytoplasmic Thioredoxin To The Periplasm, Thereby Maintaining The

COG id: COG4232

COG function: function code OC; Thiol:disulfide interchange protein

Gene ontology:

Cell location: Integral Membrane Protein. Inner Membrane [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: 1.8.1.8 [C]

Molecular weight: Translated: 38689; Mature: 38689

Theoretical pI: Translated: 9.80; Mature: 9.80

Prosite motif: PS50005 TPR ; PS50293 TPR_REGION ; PS00194 THIOREDOXIN

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.2 %Cys     (Translated Protein)
1.2 %Met     (Translated Protein)
2.4 %Cys+Met (Translated Protein)
1.2 %Cys     (Mature Protein)
1.2 %Met     (Mature Protein)
2.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MIKKNLSNFPAPPSKMRIGPNYHSELSYLRRDLFSDSNNLWVKSKLRLFKRNTTFSLRYV
CCCCCCCCCCCCCCCEEECCCHHHHHHHHHHHHHCCCCCEEEHHHHHHHHCCCCEEEHHH
RFLSFSTSVLFCVIFCLPISAEIQWEKSVKTAFEKAKINGKPIFIDVYADWCGYCKILKN
HHHHHHHHHHHHHHHHHCCCCCEEEHHHHHHHHHHHCCCCCEEEEEEHHHHHHHHHHHHH
EIYPKKEVQLELSKFVTLSLDGDTFPNLKRKYGIKGYPSILFLDQNGSLIDKITGMPDSK
HCCCCHHHHEEEEEEEEEEECCCCCCCHHHHCCCCCCCEEEEECCCCCHHHHHCCCCCHH
MILKYLKNAYAHRNLEKEYLEKLAKDPNGIKTNFQAGVYYFEAKEYTKAIQFFRKVIDAN
HHHHHHHHHHHHCCCCHHHHHHHHCCCCCCCCCCCCCEEEEEHHHHHHHHHHHHHHHCCC
DTKNTDKKHDALFNLGISYLEVGNFKFAIATFNSYISRYPNGDLSSILYFRANAYEELNR
CCCCCCHHHHHHHHCCHHHEEECCEEEEHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHH
KEEAKADYKKVLELTVDPEEKRDLQFRIDSLN
HHHHHHHHHHHHHEECCCCCCCCEEEEEECCC
>Mature Secondary Structure
MIKKNLSNFPAPPSKMRIGPNYHSELSYLRRDLFSDSNNLWVKSKLRLFKRNTTFSLRYV
CCCCCCCCCCCCCCCEEECCCHHHHHHHHHHHHHCCCCCEEEHHHHHHHHCCCCEEEHHH
RFLSFSTSVLFCVIFCLPISAEIQWEKSVKTAFEKAKINGKPIFIDVYADWCGYCKILKN
HHHHHHHHHHHHHHHHHCCCCCEEEHHHHHHHHHHHCCCCCEEEEEEHHHHHHHHHHHHH
EIYPKKEVQLELSKFVTLSLDGDTFPNLKRKYGIKGYPSILFLDQNGSLIDKITGMPDSK
HCCCCHHHHEEEEEEEEEEECCCCCCCHHHHCCCCCCCEEEEECCCCCHHHHHCCCCCHH
MILKYLKNAYAHRNLEKEYLEKLAKDPNGIKTNFQAGVYYFEAKEYTKAIQFFRKVIDAN
HHHHHHHHHHHHCCCCHHHHHHHHCCCCCCCCCCCCCEEEEEHHHHHHHHHHHHHHHCCC
DTKNTDKKHDALFNLGISYLEVGNFKFAIATFNSYISRYPNGDLSSILYFRANAYEELNR
CCCCCCHHHHHHHHCCHHHEEECCEEEEHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHH
KEEAKADYKKVLELTVDPEEKRDLQFRIDSLN
HHHHHHHHHHHHHEECCCCCCCCEEEEEECCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: DsbGoxidized; DsbDreduced/thiol:disulfide reductase [C]

Specific reaction: DsbDreduced/thiol:disulfide reductase + DsbCoxidized = DsbDoxidized + DsbCreduced DsbGoxidized + DsbDreduced/thiol:disulfide reductase = DsbGreduced + DsbDoxidized [C]

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: NA