| Definition | Leptospira borgpetersenii serovar Hardjo-bovis L550 chromosome 1, complete sequence. |
|---|---|
| Accession | NC_008508 |
| Length | 3,614,446 |
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The map label for this gene is 116329137
Identifier: 116329137
GI number: 116329137
Start: 3039486
End: 3040445
Strand: Reverse
Name: 116329137
Synonym: LBL_2560
Alternate gene names: NA
Gene position: 3040445-3039486 (Counterclockwise)
Preceding gene: 116329140
Following gene: 116329136
Centisome position: 84.12
GC content: 38.33
Gene sequence:
>960_bases ATGCTGCCATCGGATCAAAAATTTTTACCATTTAACTTTAAACTTCATTTTTCCATTACGAGAATTCGCAAAATTACGGA TCGTTCCGCGAAAATGTTTCCTCCTAAACTCGATGGAATGTTGTTATACGTTTTATTTTTCGTATCGATTTGTTTTTTTA CGAATCTCGACGCAAAATCGATTTTACTCAAAAATGAGAGAAAAATCGTGAATGTGGAAATTAAAACTGTTCCCAACGGT TTTGAAATCACCCACAAAAACGGTAAAGTGGAGAGAATTTCCCTCGCGGAAGTCCAGAAAGTTTTTATTTCTAATTTTCC GCCGAATCAAACTAAAAAACCAGAGGTAAGCAAAACGCCGCTCAATATAGAAGCGAATCAAGAACAAATCGCTCCTTTGC GTCAAACTGAAACACCTGAAGCGGCCAAAACGATTCCCAAATTAGAGGCAAATCTAGACGAAAGAGTTTCCTCGGCCAAA AAATCAGGAATTAAAATTTTCGCTGAAGGTCTAATTCCCGGATGGTCCAGATTACTCCGAAACGATTCTTATTCTTTAAA GGGTTTGGGTTTTCTTTTGATACTCGCGGAGCTTTATCTTGCCGAAAGAAGTTACCTATATTTGAGTCCCGTAAAGTCAG CTTTGAAAACGAATAGCCCACCTACACCGTTCGAGCTGATTGCCATCGCGTCGAACGATCCAAACCTGATAAATATTGCC GCGCCGTACAGTATCGTTTCGAATTCTTCGAAAGTCGTTCTTATGGACGGCCAATTGATGGAAAAAAGTCGTTACGCTTA TGAAAAACAAGCGTATGTTTCCGCTTTTGTTTTCGTTTTAATTCTGGACGCTTTTTTAGGATATACGTTTGAAAATTGGA AAGTTATACCTAGCGTGAACGTTTCTTTTCGGGATCAGGAAATTAAAGAAATTTCGGGTGGATTGATTTTTCATTTTTAG
Upstream 100 bases:
>100_bases TCAAAATCAAAAATTTGACTTTCGGAATTTTGGCTCATCTGTAATTAAATAACGGACTGACTTGTAAAAAAGTGTCACAC TAAAAGCAAAAAAAAATCGA
Downstream 100 bases:
>100_bases AATCGGTCCGAAATCTCAAAGTTCGGTTGTTTCTTTTTGAACTCTTGTTCTAGGAGTCGGATATCAGGGTTTATTCGCTA ATTTCTAGAAAATAATCATT
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 319; Mature: 319
Protein sequence:
>319_residues MLPSDQKFLPFNFKLHFSITRIRKITDRSAKMFPPKLDGMLLYVLFFVSICFFTNLDAKSILLKNERKIVNVEIKTVPNG FEITHKNGKVERISLAEVQKVFISNFPPNQTKKPEVSKTPLNIEANQEQIAPLRQTETPEAAKTIPKLEANLDERVSSAK KSGIKIFAEGLIPGWSRLLRNDSYSLKGLGFLLILAELYLAERSYLYLSPVKSALKTNSPPTPFELIAIASNDPNLINIA APYSIVSNSSKVVLMDGQLMEKSRYAYEKQAYVSAFVFVLILDAFLGYTFENWKVIPSVNVSFRDQEIKEISGGLIFHF
Sequences:
>Translated_319_residues MLPSDQKFLPFNFKLHFSITRIRKITDRSAKMFPPKLDGMLLYVLFFVSICFFTNLDAKSILLKNERKIVNVEIKTVPNG FEITHKNGKVERISLAEVQKVFISNFPPNQTKKPEVSKTPLNIEANQEQIAPLRQTETPEAAKTIPKLEANLDERVSSAK KSGIKIFAEGLIPGWSRLLRNDSYSLKGLGFLLILAELYLAERSYLYLSPVKSALKTNSPPTPFELIAIASNDPNLINIA APYSIVSNSSKVVLMDGQLMEKSRYAYEKQAYVSAFVFVLILDAFLGYTFENWKVIPSVNVSFRDQEIKEISGGLIFHF >Mature_319_residues MLPSDQKFLPFNFKLHFSITRIRKITDRSAKMFPPKLDGMLLYVLFFVSICFFTNLDAKSILLKNERKIVNVEIKTVPNG FEITHKNGKVERISLAEVQKVFISNFPPNQTKKPEVSKTPLNIEANQEQIAPLRQTETPEAAKTIPKLEANLDERVSSAK KSGIKIFAEGLIPGWSRLLRNDSYSLKGLGFLLILAELYLAERSYLYLSPVKSALKTNSPPTPFELIAIASNDPNLINIA APYSIVSNSSKVVLMDGQLMEKSRYAYEKQAYVSAFVFVLILDAFLGYTFENWKVIPSVNVSFRDQEIKEISGGLIFHF
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 36061; Mature: 36061
Theoretical pI: Translated: 9.90; Mature: 9.90
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.3 %Cys (Translated Protein) 1.6 %Met (Translated Protein) 1.9 %Cys+Met (Translated Protein) 0.3 %Cys (Mature Protein) 1.6 %Met (Mature Protein) 1.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MLPSDQKFLPFNFKLHFSITRIRKITDRSAKMFPPKLDGMLLYVLFFVSICFFTNLDAKS CCCCCCCEEEEEEEEEEEHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHHHCCCCHHH ILLKNERKIVNVEIKTVPNGFEITHKNGKVERISLAEVQKVFISNFPPNQTKKPEVSKTP EEEECCCEEEEEEEEECCCCEEEEECCCCEEEEHHHHHHHHHHCCCCCCCCCCCCCCCCC LNIEANQEQIAPLRQTETPEAAKTIPKLEANLDERVSSAKKSGIKIFAEGLIPGWSRLLR EEEECCHHHCCCCCCCCCCHHHHHHHHHHCCHHHHHHHHHHCCCEEEEECCCHHHHHHHC NDSYSLKGLGFLLILAELYLAERSYLYLSPVKSALKTNSPPTPFELIAIASNDPNLINIA CCCCCHHHHHHHHHHHHHHHHHCCEEEEHHHHHHHHCCCCCCCEEEEEEECCCCCEEEEE APYSIVSNSSKVVLMDGQLMEKSRYAYEKQAYVSAFVFVLILDAFLGYTFENWKVIPSVN CCCHHHCCCCEEEEECCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCEECCCEEEECCC VSFRDQEIKEISGGLIFHF CEECHHHHHHHCCCEEEEC >Mature Secondary Structure MLPSDQKFLPFNFKLHFSITRIRKITDRSAKMFPPKLDGMLLYVLFFVSICFFTNLDAKS CCCCCCCEEEEEEEEEEEHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHHHCCCCHHH ILLKNERKIVNVEIKTVPNGFEITHKNGKVERISLAEVQKVFISNFPPNQTKKPEVSKTP EEEECCCEEEEEEEEECCCCEEEEECCCCEEEEHHHHHHHHHHCCCCCCCCCCCCCCCCC LNIEANQEQIAPLRQTETPEAAKTIPKLEANLDERVSSAKKSGIKIFAEGLIPGWSRLLR EEEECCHHHCCCCCCCCCCHHHHHHHHHHCCHHHHHHHHHHCCCEEEEECCCHHHHHHHC NDSYSLKGLGFLLILAELYLAERSYLYLSPVKSALKTNSPPTPFELIAIASNDPNLINIA CCCCCHHHHHHHHHHHHHHHHHCCEEEEHHHHHHHHCCCCCCCEEEEEEECCCCCEEEEE APYSIVSNSSKVVLMDGQLMEKSRYAYEKQAYVSAFVFVLILDAFLGYTFENWKVIPSVN CCCHHHCCCCEEEEECCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCEECCCEEEECCC VSFRDQEIKEISGGLIFHF CEECHHHHHHHCCCEEEEC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA