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The map label for this gene is 116329136

Identifier: 116329136

GI number: 116329136

Start: 3038147

End: 3038890

Strand: Reverse

Name: 116329136

Synonym: LBL_2559

Alternate gene names: NA

Gene position: 3038890-3038147 (Counterclockwise)

Preceding gene: 116329137

Following gene: 116329134

Centisome position: 84.08

GC content: 40.59

Gene sequence:

>744_bases
TTGGAGGATTCAAATTATGTTTCAAAAAAAATAGCTGTTATGTTGTTCTTAGCGTTGCTTTTTTCGAACTGCGCTAACAA
AAACGACGACAAGTCTCTTAACAATGCCCTTCTTTTGGCGGCTCTTCAACAAAAAGATCCGGGAACTGCCGGGGCATATG
CCGCTTTGAGCATTCTATCCGCAAACAACAATCCTGGAAAACAGGGAGCTTATTCCAGAGGGAATGCGTCACCTTTTGCG
GTAATCAATCAATCTCAGGATTGTGCTTCGGGCGGAAAGATGACTTTGTCGGGCGATTATACCGATAGCCAAACGGCTAA
CGGATTTAGTATGCGATATACCGGTACAAAGATGACATTTGAAAATTGCCAACAAATGGCGCCCTCAATGCAGGGTAGTG
GGACTTCTCTTTTTACCATTCAAGGAGAAATTACGTTGGATGGAAGAGCGGATATCGTAATGGATGGAAATTTTAATCCG
AATGCCCCGGTGACAGAGCTGAAGTATACTCTAAACAGTACACAAAGAATGCATAGTAGTTCTTATACCGTCAACGGTTT
CCTATATCCGAAAATGGATATTACTTTCACATCAAACAATGCAAAATATTCGTTTCAGAATATGGACGATATTGATAAAA
CAACTATCACCATTGAAGAGACCGTGGAAATCAGCGGAACGATCGGTGAGGAAAAGATAAAAGATTCACATACCTATAAA
TCTACGATTAAGCTTAAACCTTAA

Upstream 100 bases:

>100_bases
ATTTACGTTAAAGTACGTTTCAACCCCGAATTTAATTTCCATTCCTTGAATTTTTTGTGGCACAAAAAAAATCGAGGGCC
GTTGGCATAGTTGAACCAAT

Downstream 100 bases:

>100_bases
ATTATTTCTGGGCCGCCGAGCCGAAAAGGTTCGGCGGCGTGAATGGATATCATACATTAGTGACTGTTTGATCTGTAGAC
TAACACTTTTATAAAATCGA

Product: lipoprotein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 247; Mature: 247

Protein sequence:

>247_residues
MEDSNYVSKKIAVMLFLALLFSNCANKNDDKSLNNALLLAALQQKDPGTAGAYAALSILSANNNPGKQGAYSRGNASPFA
VINQSQDCASGGKMTLSGDYTDSQTANGFSMRYTGTKMTFENCQQMAPSMQGSGTSLFTIQGEITLDGRADIVMDGNFNP
NAPVTELKYTLNSTQRMHSSSYTVNGFLYPKMDITFTSNNAKYSFQNMDDIDKTTITIEETVEISGTIGEEKIKDSHTYK
STIKLKP

Sequences:

>Translated_247_residues
MEDSNYVSKKIAVMLFLALLFSNCANKNDDKSLNNALLLAALQQKDPGTAGAYAALSILSANNNPGKQGAYSRGNASPFA
VINQSQDCASGGKMTLSGDYTDSQTANGFSMRYTGTKMTFENCQQMAPSMQGSGTSLFTIQGEITLDGRADIVMDGNFNP
NAPVTELKYTLNSTQRMHSSSYTVNGFLYPKMDITFTSNNAKYSFQNMDDIDKTTITIEETVEISGTIGEEKIKDSHTYK
STIKLKP
>Mature_247_residues
MEDSNYVSKKIAVMLFLALLFSNCANKNDDKSLNNALLLAALQQKDPGTAGAYAALSILSANNNPGKQGAYSRGNASPFA
VINQSQDCASGGKMTLSGDYTDSQTANGFSMRYTGTKMTFENCQQMAPSMQGSGTSLFTIQGEITLDGRADIVMDGNFNP
NAPVTELKYTLNSTQRMHSSSYTVNGFLYPKMDITFTSNNAKYSFQNMDDIDKTTITIEETVEISGTIGEEKIKDSHTYK
STIKLKP

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 26817; Mature: 26817

Theoretical pI: Translated: 5.30; Mature: 5.30

Prosite motif: PS00784 RIBOSOMAL_L34

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.2 %Cys     (Translated Protein)
4.5 %Met     (Translated Protein)
5.7 %Cys+Met (Translated Protein)
1.2 %Cys     (Mature Protein)
4.5 %Met     (Mature Protein)
5.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MEDSNYVSKKIAVMLFLALLFSNCANKNDDKSLNNALLLAALQQKDPGTAGAYAALSILS
CCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCHHCCEEEEEEECCCCCCCCHHHEEEEEEE
ANNNPGKQGAYSRGNASPFAVINQSQDCASGGKMTLSGDYTDSQTANGFSMRYTGTKMTF
CCCCCCCCCCCCCCCCCCEEEEECCCCCCCCCCEEEECCCCCCCCCCCEEEEEECCCCCH
ENCQQMAPSMQGSGTSLFTIQGEITLDGRADIVMDGNFNPNAPVTELKYTLNSTQRMHSS
HHHHHHCCCCCCCCCEEEEEEEEEEECCCEEEEECCCCCCCCCHHEEEEEHHHHHHHCCC
SYTVNGFLYPKMDITFTSNNAKYSFQNMDDIDKTTITIEETVEISGTIGEEKIKDSHTYK
CEEEEEEEEEEEEEEEECCCCEEEECCCCCCCCEEEEEEEEEEEECCCCHHHHCCCCCEE
STIKLKP
EEEEECC
>Mature Secondary Structure
MEDSNYVSKKIAVMLFLALLFSNCANKNDDKSLNNALLLAALQQKDPGTAGAYAALSILS
CCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCHHCCEEEEEEECCCCCCCCHHHEEEEEEE
ANNNPGKQGAYSRGNASPFAVINQSQDCASGGKMTLSGDYTDSQTANGFSMRYTGTKMTF
CCCCCCCCCCCCCCCCCCEEEEECCCCCCCCCCEEEECCCCCCCCCCCEEEEEECCCCCH
ENCQQMAPSMQGSGTSLFTIQGEITLDGRADIVMDGNFNPNAPVTELKYTLNSTQRMHSS
HHHHHHCCCCCCCCCEEEEEEEEEEECCCEEEEECCCCCCCCCHHEEEEEHHHHHHHCCC
SYTVNGFLYPKMDITFTSNNAKYSFQNMDDIDKTTITIEETVEISGTIGEEKIKDSHTYK
CEEEEEEEEEEEEEEEECCCCEEEECCCCCCCCEEEEEEEEEEEECCCCHHHHCCCCCEE
STIKLKP
EEEEECC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA