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The map label for this gene is ccmE

Identifier: 116329100

GI number: 116329100

Start: 2988402

End: 2988797

Strand: Direct

Name: ccmE

Synonym: LBL_2521

Alternate gene names: NA

Gene position: 2988402-2988797 (Clockwise)

Preceding gene: 116329099

Following gene: 116329101

Centisome position: 82.68

GC content: 44.19

Gene sequence:

>396_bases
ATGAACATCAAATTCACGGTCCTCGCAGGGATTATTCTTTTGTCCCTCGGCTCTATCGCTTACTTTTCTTCCAAGGAAAC
ATCCTACACTCTTCTCGATGCCTCGGAACTCGCGGCATCCCCGGCTAAATATCAGGACAATCTTTTAAGAGTCAGAGGTT
TTGTGAAATTAGGCTCCGTGATTCGCGAAGGTAAGACCGCGAGGTTCATATTAGAATTTAACGAAAAACAAATCCCCGTT
TTTTTTACGGGAGAAACCCTTCTTCCTGACGCTTTTAAAGAAGGTACGCGTGCGAGAGTGGACGGTTATATAAAAGACGG
AGTGTTAGTCTCGGATCACGTAGAAGCGAAATGCGCCTCCAAATACGAAGCCGATTATTCGGAAGAAAACAAATAA

Upstream 100 bases:

>100_bases
AATCCCCGATGGAACGAAAGAAAACCGGGATATTTCCACTTTTCTCCCACCATCCGTTGCACTTTTATGGTCTAAAACGC
AAACAATCGGAACTTTTACG

Downstream 100 bases:

>100_bases
AAGGATTACGTTTTTTTAATATGAATGATTTCGGCGCACTTTGCATCATCACTTCTTTCGCGATTCTTCTTTTTTCGATC
GTTCAGACTTCTTACGGAAT

Product: cytochrome c-type biogenesis protein CcmE

Products: NA

Alternate protein names: Cytochrome-C Biosynthesis Protein CcmE

Number of amino acids: Translated: 131; Mature: 131

Protein sequence:

>131_residues
MNIKFTVLAGIILLSLGSIAYFSSKETSYTLLDASELAASPAKYQDNLLRVRGFVKLGSVIREGKTARFILEFNEKQIPV
FFTGETLLPDAFKEGTRARVDGYIKDGVLVSDHVEAKCASKYEADYSEENK

Sequences:

>Translated_131_residues
MNIKFTVLAGIILLSLGSIAYFSSKETSYTLLDASELAASPAKYQDNLLRVRGFVKLGSVIREGKTARFILEFNEKQIPV
FFTGETLLPDAFKEGTRARVDGYIKDGVLVSDHVEAKCASKYEADYSEENK
>Mature_131_residues
MNIKFTVLAGIILLSLGSIAYFSSKETSYTLLDASELAASPAKYQDNLLRVRGFVKLGSVIREGKTARFILEFNEKQIPV
FFTGETLLPDAFKEGTRARVDGYIKDGVLVSDHVEAKCASKYEADYSEENK

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 14537; Mature: 14537

Theoretical pI: Translated: 5.94; Mature: 5.94

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.8 %Cys     (Translated Protein)
0.8 %Met     (Translated Protein)
1.5 %Cys+Met (Translated Protein)
0.8 %Cys     (Mature Protein)
0.8 %Met     (Mature Protein)
1.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNIKFTVLAGIILLSLGSIAYFSSKETSYTLLDASELAASPAKYQDNLLRVRGFVKLGSV
CCEEHHHHHHHHHHHHCCCEEECCCCCEEEEEEHHHHHCCCCHHHHHHHHHHHHHHHHHH
IREGKTARFILEFNEKQIPVFFTGETLLPDAFKEGTRARVDGYIKDGVLVSDHVEAKCAS
HHCCCCEEEEEEECCCCCCEEEECCCCCCHHHHCCCCHHCCCEECCCEEEECCCHHHHHH
KYEADYSEENK
HCCCCCCCCCC
>Mature Secondary Structure
MNIKFTVLAGIILLSLGSIAYFSSKETSYTLLDASELAASPAKYQDNLLRVRGFVKLGSV
CCEEHHHHHHHHHHHHCCCEEECCCCCEEEEEEHHHHHCCCCHHHHHHHHHHHHHHHHHH
IREGKTARFILEFNEKQIPVFFTGETLLPDAFKEGTRARVDGYIKDGVLVSDHVEAKCAS
HHCCCCEEEEEEECCCCCCEEEECCCCCCHHHHCCCCHHCCCEECCCEEEECCCHHHHHH
KYEADYSEENK
HCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA