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The map label for this gene is ycbC [C]

Identifier: 116329099

GI number: 116329099

Start: 2987481

End: 2988302

Strand: Direct

Name: ycbC [C]

Synonym: LBL_2520

Alternate gene names: 116329099

Gene position: 2987481-2988302 (Clockwise)

Preceding gene: 116329098

Following gene: 116329100

Centisome position: 82.65

GC content: 42.7

Gene sequence:

>822_bases
ATGTCCACGATTTTATTTTCGATTTCAAAACTTGCGACTCTTGTCTTATTTCCCTTGCCCTTAGTTCTTCTCTTACTTTT
ATTTGCCGGCGCCAAATTGAAAAAATGGAAAGAAAAATTTTCCGTTTGGGCGCCGGTTTTAATCCTTTGGCTTTTATCCA
CGAGTAATATTTCTCAGAAATTGATTCAATCTTTGGAAATCTATTACCCTCCACTCCCGCTCGAACAAGTTCCCCGGGCG
GACGTCATACTCGTATTAGGCGGAATGGTCTCGACTTTGAGCATCCACAACAAACCGGTGGATCTTTCTAACAGCGCGGA
AAGACTTACGGAAACGGTAAGACTTTATAGGGCCAAAAAGGCGCCTAAGATCTTGTTCTCCGGAGGCTCCGGAAATCTTT
TGTATCAGACGGTTCCGGAATCCGAACCTGCAGGAAGGTTCTTAAAACAAATGGGCATACCCGATTCTTCCCTGATCTTA
GAATCGAAAAGTCGGAACACAGTGGAGAACAAAAACTTCGCGGTCGAGCTACTAAAGAAACACGGCTGGAGTTCGGTAAT
TTTAGTCACTTCTTCTTTTCACATGAAAAGATCCGTCGAGATTTTTCAAGAAAAAGGGATCACGATCATTCCCTTTCCCA
CCGACTTCCGAACTCAAAAGTCTGTCTTAACCTTGGATAATTTTTTTCCTTCCACAGGATGTCTCGAAAATTCCACGATC
TCGATCAAAGAATGGATCGGAATACTCGTTCATAAAATCCGAACTACGATCTCGATTCAAGAATGGGTCGAGATTCTCAT
CCATAAGATCCGGAATTCATGA

Upstream 100 bases:

>100_bases
TTTGGATTTTATAGAAGTTCCCTTTAATCATAGCATTTCTTTTTAAAAAGTAACTTTGTCTTAAAAAATAAGGAGAACGG
AACTTCCAATCCAATTACAC

Downstream 100 bases:

>100_bases
ATCCCCGATGGAACGAAAGAAAACCGGGATATTTCCACTTTTCTCCCACCATCCGTTGCACTTTTATGGTCTAAAACGCA
AACAATCGGAACTTTTACGA

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 273; Mature: 272

Protein sequence:

>273_residues
MSTILFSISKLATLVLFPLPLVLLLLLFAGAKLKKWKEKFSVWAPVLILWLLSTSNISQKLIQSLEIYYPPLPLEQVPRA
DVILVLGGMVSTLSIHNKPVDLSNSAERLTETVRLYRAKKAPKILFSGGSGNLLYQTVPESEPAGRFLKQMGIPDSSLIL
ESKSRNTVENKNFAVELLKKHGWSSVILVTSSFHMKRSVEIFQEKGITIIPFPTDFRTQKSVLTLDNFFPSTGCLENSTI
SIKEWIGILVHKIRTTISIQEWVEILIHKIRNS

Sequences:

>Translated_273_residues
MSTILFSISKLATLVLFPLPLVLLLLLFAGAKLKKWKEKFSVWAPVLILWLLSTSNISQKLIQSLEIYYPPLPLEQVPRA
DVILVLGGMVSTLSIHNKPVDLSNSAERLTETVRLYRAKKAPKILFSGGSGNLLYQTVPESEPAGRFLKQMGIPDSSLIL
ESKSRNTVENKNFAVELLKKHGWSSVILVTSSFHMKRSVEIFQEKGITIIPFPTDFRTQKSVLTLDNFFPSTGCLENSTI
SIKEWIGILVHKIRTTISIQEWVEILIHKIRNS
>Mature_272_residues
STILFSISKLATLVLFPLPLVLLLLLFAGAKLKKWKEKFSVWAPVLILWLLSTSNISQKLIQSLEIYYPPLPLEQVPRAD
VILVLGGMVSTLSIHNKPVDLSNSAERLTETVRLYRAKKAPKILFSGGSGNLLYQTVPESEPAGRFLKQMGIPDSSLILE
SKSRNTVENKNFAVELLKKHGWSSVILVTSSFHMKRSVEIFQEKGITIIPFPTDFRTQKSVLTLDNFFPSTGCLENSTIS
IKEWIGILVHKIRTTISIQEWVEILIHKIRNS

Specific function: Unknown

COG id: COG1434

COG function: function code S; Uncharacterized conserved protein

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

Organism=Escherichia coli, GI1787150, Length=161, Percent_Identity=29.1925465838509, Blast_Score=68, Evalue=8e-13,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR003848
- InterPro:   IPR014729 [H]

Pfam domain/function: PF02698 DUF218 [H]

EC number: NA

Molecular weight: Translated: 30740; Mature: 30609

Theoretical pI: Translated: 10.40; Mature: 10.40

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.4 %Cys     (Translated Protein)
1.5 %Met     (Translated Protein)
1.8 %Cys+Met (Translated Protein)
0.4 %Cys     (Mature Protein)
1.1 %Met     (Mature Protein)
1.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSTILFSISKLATLVLFPLPLVLLLLLFAGAKLKKWKEKFSVWAPVLILWLLSTSNISQK
CCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHCCCHHHHH
LIQSLEIYYPPLPLEQVPRADVILVLGGMVSTLSIHNKPVDLSNSAERLTETVRLYRAKK
HHHHHHHHCCCCCHHHCCCCCEEEEHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHCC
APKILFSGGSGNLLYQTVPESEPAGRFLKQMGIPDSSLILESKSRNTVENKNFAVELLKK
CCEEEEECCCCCEEEEECCCCCHHHHHHHHHCCCCHHEEEECCCCCCCCCCHHHHHHHHH
HGWSSVILVTSSFHMKRSVEIFQEKGITIIPFPTDFRTQKSVLTLDNFFPSTGCLENSTI
CCCCEEEEEECCHHHHHHHHHHHHCCCEEEECCCCCCCCCCEEEHHHCCCCCCCCCCCCE
SIKEWIGILVHKIRTTISIQEWVEILIHKIRNS
EHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC
>Mature Secondary Structure 
STILFSISKLATLVLFPLPLVLLLLLFAGAKLKKWKEKFSVWAPVLILWLLSTSNISQK
CHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHCCCHHHHH
LIQSLEIYYPPLPLEQVPRADVILVLGGMVSTLSIHNKPVDLSNSAERLTETVRLYRAKK
HHHHHHHHCCCCCHHHCCCCCEEEEHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHCC
APKILFSGGSGNLLYQTVPESEPAGRFLKQMGIPDSSLILESKSRNTVENKNFAVELLKK
CCEEEEECCCCCEEEEECCCCCHHHHHHHHHCCCCHHEEEECCCCCCCCCCHHHHHHHHH
HGWSSVILVTSSFHMKRSVEIFQEKGITIIPFPTDFRTQKSVLTLDNFFPSTGCLENSTI
CCCCEEEEEECCHHHHHHHHHHHHCCCEEEECCCCCCCCCCEEEHHHCCCCCCCCCCCCE
SIKEWIGILVHKIRTTISIQEWVEILIHKIRNS
EHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 7542800 [H]