Click here to switch to the map view.

The map label for this gene is 116329079

Identifier: 116329079

GI number: 116329079

Start: 2955878

End: 2956249

Strand: Reverse

Name: 116329079

Synonym: LBL_2496

Alternate gene names: NA

Gene position: 2956249-2955878 (Counterclockwise)

Preceding gene: 116329080

Following gene: 116329078

Centisome position: 81.79

GC content: 39.25

Gene sequence:

>372_bases
ATGGTCTCCTCAATTTTTAAAATATGGATCGGATGCACTTTGTTATCCGTTCTTGTGTTGATTTTGAATTGCGGGCCAAT
CTGCGGATTCGATTCTAAAATAAATAGAATTGTCGAAACTCCGCTATCTTCAGCTTCTTGTCATCAAGAATCGAATTCGG
AAAAGACTTCCGGTTGTGAATGGGATTCCAGTTCAATCGTTCTCACGGATTCCCACCTTTTCAAACTTTTAAGGTTCTTT
ATACCGCTGCGTATTTATTCCGCAAATCCGTCCTTTTCATTCTTTCCTTTCACGGCACAGATAGAGTTCGATTTTGTCGA
AAATGGTTCGAATGAAATTCGATCTCTCGCTTCCGTCCGTCTTTTAATTTAA

Upstream 100 bases:

>100_bases
CGTTTTTAAAACGAAGTTTCGGGAAATGATAAACAGTGATTGAAAAGCCTTAAGATTGTTTTTTCCGTTGACAAGTTCTG
AGGTATAGTAAGCTGGAGAT

Downstream 100 bases:

>100_bases
TCTTTAATCTCCAAACTCTTTATTCTTTCGATTTTGAGATCGGATGAAACGGATATACGTTCTTTCGTTTCAAGTTCGAA
GTAAATGTCTTTTACCGCTT

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 123; Mature: 123

Protein sequence:

>123_residues
MVSSIFKIWIGCTLLSVLVLILNCGPICGFDSKINRIVETPLSSASCHQESNSEKTSGCEWDSSSIVLTDSHLFKLLRFF
IPLRIYSANPSFSFFPFTAQIEFDFVENGSNEIRSLASVRLLI

Sequences:

>Translated_123_residues
MVSSIFKIWIGCTLLSVLVLILNCGPICGFDSKINRIVETPLSSASCHQESNSEKTSGCEWDSSSIVLTDSHLFKLLRFF
IPLRIYSANPSFSFFPFTAQIEFDFVENGSNEIRSLASVRLLI
>Mature_123_residues
MVSSIFKIWIGCTLLSVLVLILNCGPICGFDSKINRIVETPLSSASCHQESNSEKTSGCEWDSSSIVLTDSHLFKLLRFF
IPLRIYSANPSFSFFPFTAQIEFDFVENGSNEIRSLASVRLLI

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 13744; Mature: 13744

Theoretical pI: Translated: 5.66; Mature: 5.66

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

4.1 %Cys     (Translated Protein)
0.8 %Met     (Translated Protein)
4.9 %Cys+Met (Translated Protein)
4.1 %Cys     (Mature Protein)
0.8 %Met     (Mature Protein)
4.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MVSSIFKIWIGCTLLSVLVLILNCGPICGFDSKINRIVETPLSSASCHQESNSEKTSGCE
CCHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHCCCCCCCCCCCCCCCCCCCCC
WDSSSIVLTDSHLFKLLRFFIPLRIYSANPSFSFFPFTAQIEFDFVENGSNEIRSLASVR
CCCCCEEEEHHHHHHHHHHHHHHEEEECCCCCEEEEEEEEEEEEEECCCHHHHHHHHHHH
LLI
CCC
>Mature Secondary Structure
MVSSIFKIWIGCTLLSVLVLILNCGPICGFDSKINRIVETPLSSASCHQESNSEKTSGCE
CCHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHCCCCCCCCCCCCCCCCCCCCC
WDSSSIVLTDSHLFKLLRFFIPLRIYSANPSFSFFPFTAQIEFDFVENGSNEIRSLASVR
CCCCCEEEEHHHHHHHHHHHHHHEEEECCCCCEEEEEEEEEEEEEECCCHHHHHHHHHHH
LLI
CCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA