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The map label for this gene is ssb [H]

Identifier: 116329038

GI number: 116329038

Start: 2895142

End: 2895495

Strand: Direct

Name: ssb [H]

Synonym: LBL_2444

Alternate gene names: 116329038

Gene position: 2895142-2895495 (Clockwise)

Preceding gene: 116329037

Following gene: 116329039

Centisome position: 80.1

GC content: 45.2

Gene sequence:

>354_bases
ATGAAAAACCTAGCGCATATTGTTTTGGACGGAAATCTCACCTCCGATCCGGAAATTAAAACCTTAAACAGCGGAAAGAA
TGTAGCCACTTTCACTCTGGCGGTCAACCACGATTATAAATCCACACCGGAAGAACCAGGCGAGGTTTCCTTTGTAGACA
TCGAATTATGGGATCGCCAAGCCATAAACGCGCACGAATATCTCAAAAAAGGAAAAAAAGCGACCGTGATCGGCGAACTT
CGTCAGGATCGATGGAAGTCGCAGGATGGAAGTAATAGAAGCAAACTAAAAGTAGTCGGATATACGATTCGGTTCGACGG
TTTGCCTGGAAGAAAGGAACGGGAAGCAGCTTAA

Upstream 100 bases:

>100_bases
GAACTCCCTAAAAAAAATCCAAAATTACGCTCCGTTGGATTCCTGCTGAGAACCGTTTTCGGTGAGGAAGAAAATTTTCC
TCGTAACAGGAGTATGAAGA

Downstream 100 bases:

>100_bases
AGGGAATGGAAATCTGCAACGCGATCCTCATCCGTTGGGACAAAACTATAACCAGGAAGCGTTGCAGAAAGTCGAATGGG
GATTTTTTCATCTTTTTCAA

Product: single-strand DNA binding protein family

Products: NA

Alternate protein names: SSB; Helix-destabilizing protein [H]

Number of amino acids: Translated: 117; Mature: 117

Protein sequence:

>117_residues
MKNLAHIVLDGNLTSDPEIKTLNSGKNVATFTLAVNHDYKSTPEEPGEVSFVDIELWDRQAINAHEYLKKGKKATVIGEL
RQDRWKSQDGSNRSKLKVVGYTIRFDGLPGRKEREAA

Sequences:

>Translated_117_residues
MKNLAHIVLDGNLTSDPEIKTLNSGKNVATFTLAVNHDYKSTPEEPGEVSFVDIELWDRQAINAHEYLKKGKKATVIGEL
RQDRWKSQDGSNRSKLKVVGYTIRFDGLPGRKEREAA
>Mature_117_residues
MKNLAHIVLDGNLTSDPEIKTLNSGKNVATFTLAVNHDYKSTPEEPGEVSFVDIELWDRQAINAHEYLKKGKKATVIGEL
RQDRWKSQDGSNRSKLKVVGYTIRFDGLPGRKEREAA

Specific function: This protein is essential for replication of the chromosome. It is also involved in DNA recombination and repair [H]

COG id: COG0629

COG function: function code L; Single-stranded DNA-binding protein

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 SSB domain [H]

Homologues:

Organism=Escherichia coli, GI1790494, Length=100, Percent_Identity=33, Blast_Score=60, Evalue=3e-11,

Paralogues:

None

Copy number: 1622 Molecules/Cell In: Growth Phase, Glucose-minimal MOPS Media. 2,000 Molecules/Cell In: Glucose minimal media [C]

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR012340
- InterPro:   IPR016027
- InterPro:   IPR000424
- InterPro:   IPR011344 [H]

Pfam domain/function: PF00436 SSB [H]

EC number: NA

Molecular weight: Translated: 13153; Mature: 13153

Theoretical pI: Translated: 9.47; Mature: 9.47

Prosite motif: PS50935 SSB

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
0.9 %Met     (Translated Protein)
0.9 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
0.9 %Met     (Mature Protein)
0.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKNLAHIVLDGNLTSDPEIKTLNSGKNVATFTLAVNHDYKSTPEEPGEVSFVDIELWDRQ
CCCCEEEEEECCCCCCCCEEEECCCCCEEEEEEEEECCCCCCCCCCCCEEEEEEEECCCC
AINAHEYLKKGKKATVIGELRQDRWKSQDGSNRSKLKVVGYTIRFDGLPGRKEREAA
CCCHHHHHHCCCCEEEEEHHHHHHCCCCCCCCCCEEEEEEEEEEECCCCCCCCCCCC
>Mature Secondary Structure
MKNLAHIVLDGNLTSDPEIKTLNSGKNVATFTLAVNHDYKSTPEEPGEVSFVDIELWDRQ
CCCCEEEEEECCCCCCCCEEEECCCCCEEEEEEEEECCCCCCCCCCCCEEEEEEEECCCC
AINAHEYLKKGKKATVIGELRQDRWKSQDGSNRSKLKVVGYTIRFDGLPGRKEREAA
CCCHHHHHHCCCCEEEEEHHHHHHCCCCCCCCCCEEEEEEEEEEECCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA