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The map label for this gene is rsbU-2

Identifier: 116329031

GI number: 116329031

Start: 2884679

End: 2886475

Strand: Direct

Name: rsbU-2

Synonym: LBL_2436

Alternate gene names: NA

Gene position: 2884679-2886475 (Clockwise)

Preceding gene: 116329030

Following gene: 116329034

Centisome position: 79.81

GC content: 40.79

Gene sequence:

>1797_bases
ATGAATCCGTACATTCTGATTCCTTTTTCGACCTTAATCATAAACGGATTTTTGTTCTCCTATGTAAGCGCACTTAAAGG
AAAATCCGAAACGGTTACTCTGTATCAAAGATACTCTTTTTTACTTTTTCTCTGGCACGTCTCGATCATCCTGTATTGGT
CCTTTTTGCCGAATAACTGGCCCACAATCGTTTTCAAAGCGTCCTCCTTCTGTTGGATCTTTATCGGTCTTTTATTCTTT
GAATTTGTGGTTCGATTTACAAATTCTTCGTATCGATTTACGATCTACTTCTTCAGAGGCTTTTGCCTCGTTTCGTTCTT
GTTAACGATTAGCACGGATTTGGTGATAACGGGCACGATTCGCTCTTATTGGGGAGATATGATTCTCGCCGGTCCTTTGT
ATCTTCCCATAAGCAACTTTGTAAGCGTAATTCCCACGTTAATCGGTTGTTTCATCCTAATTCGAAACGGATTTCGCTCT
TCCAATCCGCTTTTAAAACAACAATCCAAACTCGTCGCTTACGGAACGATCCTTACGTTTCTATTCAGTTTCACCACAAC
TCTTCTTCCGAGATATTGGAGCGCTTCCCTTACATTTCCTCCATTAAGCGGAAGCGCCACACTCATACAATCGGTCTGCA
TTTTTATAGCGATCCATAAATACGGATTTATGGACTTAAAGCTGGAACGTATCGCGTTACGACTTTATTCCGAAATCAGG
GAAGGACTAATTCTTCTTTCCTCCAAAGGAACCCTTCTTTTCAGCAATTTATCGGCGAGAAGAATGTTACATCTCCCCGA
CAGTCTAAATCTCGGATCGAATTTCGATCTAAGGGATTATCTGGAGAATTTCCCTTCCGACTCCTTCTTTAAAAGAAAAG
AATTCGTCAATTTAAGCGTAAAAACGGAAAGCTCTTCCTTGAACTCTCCGGAAGAATTTCTGCAAATTATAGAAAACAAA
TATCTGGAAGTTTCGTCCTCTCCGATTTCCCTTTCCGGAAAAAACCGAGACAAGATTTATATACTCAGAGACATCACCGA
AAAGAAAAATGCGCTTGAGAAAATTAGGGAATTATTATATAGATTGGATCTGGATCTGGATTTTGCAAGAGACATTCAGC
AAATGATTACCACTCGGGACTTCCCGGCTTCTCCTGACTACAAAATCCATTCCCACTTTCAACCTTATGTTAAAGTGGGC
GGAGATATTTTGAATGTGATCAAAGAAAAAGACGAAAGTTTGCACATTCTTTTCGGAGACGTTTCCGGACACGGTATTTC
CGCGGCTATGGTGGCTGCGATGATTTCCATAGCGTTCAACGCGGCTACGGGAAGAAGCGGATCCACGGACAAAAATCTTC
TTTTTATACACGAGCTTTTAAAGGACACGATCACACTTCATTCCCTTTCTTCCGTATACATGAGATACGTTTCTTCCGAA
AGAAAATTAGAATATAGTTATGGAGGACACCACGCCGGTTTGTTGATTAGAAACGGAATCTGTAACCCTATCGAAGGTTC
GGGAGAAATTCTTTTTGCGACGTTGTCCCCGAAAATCCAAAGATACGAACTTGATTTGATAAAAGGCGACAGGGTTCTTT
TCTATTCGGACGGCTTGTTCGAAGTGAAAAATAGAGAAGGGAACATTTTAGGAAAAGATCATTTCCTAAAAGCGGTCGGT
TCCCTGATTGTAGAAGATACAAATTCCATGATCCGATCGATCCTCTCCTACTCCGATTCTTACGGAGAGGGAGAAGTATC
CGACGACATAACGATCTTTTGTTTGGAAATTCTTTAA

Upstream 100 bases:

>100_bases
CGTCAACATTCTCAAAACCTGCATAGGCCAGGCCCTGGCCTTCGGCAACGGAAAACTCACAGACGACTTGACGATTTTGA
TTTTGGAGATTTTTTAAAGA

Downstream 100 bases:

>100_bases
GAGATTTTTTCCCGGATTAATTTCAAAAAAGGCAGAAATTCGTCTAACGTTCCCGGCAATTCGTATTCGATCGAATCTCC
GGCGCGAATGATATCTTTCT

Product: Serine phosphatase RsbU, regulator of sigma subunit

Products: NA

Alternate protein names: Phosphoserine Phosphatase; Serine Phosphatase; Phytochrome Sensor Protein; Serine Phosphatase RsbU Regulator Of Sigma Subunit; Protein Serine/Threonine Phosphatase; Serine Phosphatase RsbU; Response Regulator Receiver Modulated Serine Phosphatase; PAS Sensor Protein; Two-Component Response Regulator; C-Like Stage II Sporulation E; Regulatory Protein; HAMP Domain-Containing Protein; Sensory Box/Response Regulator; GAF Sensor Protein; Serine/Threonine Phosphatase

Number of amino acids: Translated: 598; Mature: 598

Protein sequence:

>598_residues
MNPYILIPFSTLIINGFLFSYVSALKGKSETVTLYQRYSFLLFLWHVSIILYWSFLPNNWPTIVFKASSFCWIFIGLLFF
EFVVRFTNSSYRFTIYFFRGFCLVSFLLTISTDLVITGTIRSYWGDMILAGPLYLPISNFVSVIPTLIGCFILIRNGFRS
SNPLLKQQSKLVAYGTILTFLFSFTTTLLPRYWSASLTFPPLSGSATLIQSVCIFIAIHKYGFMDLKLERIALRLYSEIR
EGLILLSSKGTLLFSNLSARRMLHLPDSLNLGSNFDLRDYLENFPSDSFFKRKEFVNLSVKTESSSLNSPEEFLQIIENK
YLEVSSSPISLSGKNRDKIYILRDITEKKNALEKIRELLYRLDLDLDFARDIQQMITTRDFPASPDYKIHSHFQPYVKVG
GDILNVIKEKDESLHILFGDVSGHGISAAMVAAMISIAFNAATGRSGSTDKNLLFIHELLKDTITLHSLSSVYMRYVSSE
RKLEYSYGGHHAGLLIRNGICNPIEGSGEILFATLSPKIQRYELDLIKGDRVLFYSDGLFEVKNREGNILGKDHFLKAVG
SLIVEDTNSMIRSILSYSDSYGEGEVSDDITIFCLEIL

Sequences:

>Translated_598_residues
MNPYILIPFSTLIINGFLFSYVSALKGKSETVTLYQRYSFLLFLWHVSIILYWSFLPNNWPTIVFKASSFCWIFIGLLFF
EFVVRFTNSSYRFTIYFFRGFCLVSFLLTISTDLVITGTIRSYWGDMILAGPLYLPISNFVSVIPTLIGCFILIRNGFRS
SNPLLKQQSKLVAYGTILTFLFSFTTTLLPRYWSASLTFPPLSGSATLIQSVCIFIAIHKYGFMDLKLERIALRLYSEIR
EGLILLSSKGTLLFSNLSARRMLHLPDSLNLGSNFDLRDYLENFPSDSFFKRKEFVNLSVKTESSSLNSPEEFLQIIENK
YLEVSSSPISLSGKNRDKIYILRDITEKKNALEKIRELLYRLDLDLDFARDIQQMITTRDFPASPDYKIHSHFQPYVKVG
GDILNVIKEKDESLHILFGDVSGHGISAAMVAAMISIAFNAATGRSGSTDKNLLFIHELLKDTITLHSLSSVYMRYVSSE
RKLEYSYGGHHAGLLIRNGICNPIEGSGEILFATLSPKIQRYELDLIKGDRVLFYSDGLFEVKNREGNILGKDHFLKAVG
SLIVEDTNSMIRSILSYSDSYGEGEVSDDITIFCLEIL
>Mature_598_residues
MNPYILIPFSTLIINGFLFSYVSALKGKSETVTLYQRYSFLLFLWHVSIILYWSFLPNNWPTIVFKASSFCWIFIGLLFF
EFVVRFTNSSYRFTIYFFRGFCLVSFLLTISTDLVITGTIRSYWGDMILAGPLYLPISNFVSVIPTLIGCFILIRNGFRS
SNPLLKQQSKLVAYGTILTFLFSFTTTLLPRYWSASLTFPPLSGSATLIQSVCIFIAIHKYGFMDLKLERIALRLYSEIR
EGLILLSSKGTLLFSNLSARRMLHLPDSLNLGSNFDLRDYLENFPSDSFFKRKEFVNLSVKTESSSLNSPEEFLQIIENK
YLEVSSSPISLSGKNRDKIYILRDITEKKNALEKIRELLYRLDLDLDFARDIQQMITTRDFPASPDYKIHSHFQPYVKVG
GDILNVIKEKDESLHILFGDVSGHGISAAMVAAMISIAFNAATGRSGSTDKNLLFIHELLKDTITLHSLSSVYMRYVSSE
RKLEYSYGGHHAGLLIRNGICNPIEGSGEILFATLSPKIQRYELDLIKGDRVLFYSDGLFEVKNREGNILGKDHFLKAVG
SLIVEDTNSMIRSILSYSDSYGEGEVSDDITIFCLEIL

Specific function: Unknown

COG id: COG2208

COG function: function code TK; Serine phosphatase RsbU, regulator of sigma subunit

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 67976; Mature: 67976

Theoretical pI: Translated: 7.87; Mature: 7.87

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.0 %Cys     (Translated Protein)
1.5 %Met     (Translated Protein)
2.5 %Cys+Met (Translated Protein)
1.0 %Cys     (Mature Protein)
1.5 %Met     (Mature Protein)
2.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNPYILIPFSTLIINGFLFSYVSALKGKSETVTLYQRYSFLLFLWHVSIILYWSFLPNNW
CCCEEEEEHHHHHHHHHHHHHHHHHCCCCCEEHHHHHHHHHHHHHHHHHHHHHHHCCCCC
PTIVFKASSFCWIFIGLLFFEFVVRFTNSSYRFTIYFFRGFCLVSFLLTISTDLVITGTI
CEEEEECCCHHHHHHHHHHHHHHHHHCCCCEEEEEHHHHHHHHHHHHHHHCCCEEEEECH
RSYWGDMILAGPLYLPISNFVSVIPTLIGCFILIRNGFRSSNPLLKQQSKLVAYGTILTF
HHHHCCEEEECCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHH
LFSFTTTLLPRYWSASLTFPPLSGSATLIQSVCIFIAIHKYGFMDLKLERIALRLYSEIR
HHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHH
EGLILLSSKGTLLFSNLSARRMLHLPDSLNLGSNFDLRDYLENFPSDSFFKRKEFVNLSV
CCEEEEECCCCEEEECCCCCEEEECCCCCCCCCCCCHHHHHHHCCCCCHHHHHHHEEEEE
KTESSSLNSPEEFLQIIENKYLEVSSSPISLSGKNRDKIYILRDITEKKNALEKIRELLY
EECCCCCCCHHHHHHHHHHCCEEECCCCEEECCCCCCEEEEEECCHHHHHHHHHHHHHHH
RLDLDLDFARDIQQMITTRDFPASPDYKIHSHFQPYVKVGGDILNVIKEKDESLHILFGD
HHCCCCHHHHHHHHHHHCCCCCCCCCCCCCCCCCHHHHHCHHHHHHHHCCCCEEEEEEEC
VSGHGISAAMVAAMISIAFNAATGRSGSTDKNLLFIHELLKDTITLHSLSSVYMRYVSSE
CCCCCHHHHHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCC
RKLEYSYGGHHAGLLIRNGICNPIEGSGEILFATLSPKIQRYELDLIKGDRVLFYSDGLF
CCEEECCCCCEECEEEECCCCCCCCCCCCEEEEECCCCEEEEEEEEEECCEEEEEECCEE
EVKNREGNILGKDHFLKAVGSLIVEDTNSMIRSILSYSDSYGEGEVSDDITIFCLEIL
EEECCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCEEEEEEEEC
>Mature Secondary Structure
MNPYILIPFSTLIINGFLFSYVSALKGKSETVTLYQRYSFLLFLWHVSIILYWSFLPNNW
CCCEEEEEHHHHHHHHHHHHHHHHHCCCCCEEHHHHHHHHHHHHHHHHHHHHHHHCCCCC
PTIVFKASSFCWIFIGLLFFEFVVRFTNSSYRFTIYFFRGFCLVSFLLTISTDLVITGTI
CEEEEECCCHHHHHHHHHHHHHHHHHCCCCEEEEEHHHHHHHHHHHHHHHCCCEEEEECH
RSYWGDMILAGPLYLPISNFVSVIPTLIGCFILIRNGFRSSNPLLKQQSKLVAYGTILTF
HHHHCCEEEECCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHH
LFSFTTTLLPRYWSASLTFPPLSGSATLIQSVCIFIAIHKYGFMDLKLERIALRLYSEIR
HHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHH
EGLILLSSKGTLLFSNLSARRMLHLPDSLNLGSNFDLRDYLENFPSDSFFKRKEFVNLSV
CCEEEEECCCCEEEECCCCCEEEECCCCCCCCCCCCHHHHHHHCCCCCHHHHHHHEEEEE
KTESSSLNSPEEFLQIIENKYLEVSSSPISLSGKNRDKIYILRDITEKKNALEKIRELLY
EECCCCCCCHHHHHHHHHHCCEEECCCCEEECCCCCCEEEEEECCHHHHHHHHHHHHHHH
RLDLDLDFARDIQQMITTRDFPASPDYKIHSHFQPYVKVGGDILNVIKEKDESLHILFGD
HHCCCCHHHHHHHHHHHCCCCCCCCCCCCCCCCCHHHHHCHHHHHHHHCCCCEEEEEEEC
VSGHGISAAMVAAMISIAFNAATGRSGSTDKNLLFIHELLKDTITLHSLSSVYMRYVSSE
CCCCCHHHHHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCC
RKLEYSYGGHHAGLLIRNGICNPIEGSGEILFATLSPKIQRYELDLIKGDRVLFYSDGLF
CCEEECCCCCEECEEEECCCCCCCCCCCCEEEEECCCCEEEEEEEEEECCEEEEEECCEE
EVKNREGNILGKDHFLKAVGSLIVEDTNSMIRSILSYSDSYGEGEVSDDITIFCLEIL
EEECCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCEEEEEEEEC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA