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The map label for this gene is 116329023

Identifier: 116329023

GI number: 116329023

Start: 2877723

End: 2878016

Strand: Reverse

Name: 116329023

Synonym: LBL_2428

Alternate gene names: NA

Gene position: 2878016-2877723 (Counterclockwise)

Preceding gene: 116329024

Following gene: 116329022

Centisome position: 79.63

GC content: 41.5

Gene sequence:

>294_bases
ATGGACCCGGAAGAACCGATACTATGGATCAGCGAGGCAGAACTCGCAAAACAAAGAAGGATCGCAAAGGATCTTCGCAA
AACTTCCTGGTGGAAAAAGAAAAAAGGAACTGGGATCTGCCACTATTGCGGAAGGAAATTTTCTCCTGAAGAGCTTACAA
TGGATCATTTGATTCCTCTTGCAAAAGGAGGAAAGTCTATCAAGGCCAATCTTGTCCCCGCATGCAAAGAATGTAATTTC
TCTAAAAAGAATAAACTTCCCTTTGAATTCGATTCTGAAAGGGAAGAAAGTTGA

Upstream 100 bases:

>100_bases
GAAAGAAGGAATTTTTGCGACCAATAGAAGCGATCTAACGAAACTTTCCGTTTCCGGTCCGGGTTCCGACTGGGCGATTT
ACAAAGATTAGAATTTTTGA

Downstream 100 bases:

>100_bases
AGATGAGCGATCTTTTTCAAGATGAAGAACACGAGGGGCAGACTCGGGAAACCGTTCAACTTTTGGACGAGGATGGGAAT
CCTCATTCTTTTATCGTTGT

Product: HNH nuclease

Products: NA

Alternate protein names: HNH Endonuclease Family Protein; HNH Nuclease; Hnh Endonuclease; HNH Family Endonuclease

Number of amino acids: Translated: 97; Mature: 97

Protein sequence:

>97_residues
MDPEEPILWISEAELAKQRRIAKDLRKTSWWKKKKGTGICHYCGRKFSPEELTMDHLIPLAKGGKSIKANLVPACKECNF
SKKNKLPFEFDSEREES

Sequences:

>Translated_97_residues
MDPEEPILWISEAELAKQRRIAKDLRKTSWWKKKKGTGICHYCGRKFSPEELTMDHLIPLAKGGKSIKANLVPACKECNF
SKKNKLPFEFDSEREES
>Mature_97_residues
MDPEEPILWISEAELAKQRRIAKDLRKTSWWKKKKGTGICHYCGRKFSPEELTMDHLIPLAKGGKSIKANLVPACKECNF
SKKNKLPFEFDSEREES

Specific function: Unknown

COG id: COG1403

COG function: function code V; Restriction endonuclease

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 11223; Mature: 11223

Theoretical pI: Translated: 9.34; Mature: 9.34

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

4.1 %Cys     (Translated Protein)
2.1 %Met     (Translated Protein)
6.2 %Cys+Met (Translated Protein)
4.1 %Cys     (Mature Protein)
2.1 %Met     (Mature Protein)
6.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MDPEEPILWISEAELAKQRRIAKDLRKTSWWKKKKGTGICHYCGRKFSPEELTMDHLIPL
CCCCCCEEEECHHHHHHHHHHHHHHHHHHHHHHCCCCEEHHHCCCCCCCHHHHHHHHHHC
AKGGKSIKANLVPACKECNFSKKNKLPFEFDSEREES
CCCCCCEECCCCCCHHCCCCCCCCCCCCCCCCCCCCC
>Mature Secondary Structure
MDPEEPILWISEAELAKQRRIAKDLRKTSWWKKKKGTGICHYCGRKFSPEELTMDHLIPL
CCCCCCEEEECHHHHHHHHHHHHHHHHHHHHHHCCCCEEHHHCCCCCCCHHHHHHHHHHC
AKGGKSIKANLVPACKECNFSKKNKLPFEFDSEREES
CCCCCCEECCCCCCHHCCCCCCCCCCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA