Click here to switch to the map view.

The map label for this gene is 116328999

Identifier: 116328999

GI number: 116328999

Start: 2850268

End: 2851788

Strand: Reverse

Name: 116328999

Synonym: LBL_2402

Alternate gene names: NA

Gene position: 2851788-2850268 (Counterclockwise)

Preceding gene: 116329000

Following gene: 116328991

Centisome position: 78.9

GC content: 40.3

Gene sequence:

>1521_bases
ATGAAGATTCAATGGTTTCATTATAAAAAAGAAGGGTATTTTCTCTCCGTCAAAAATCTGAACGAACCGATCGAATCCCT
CAATCCGCTTTATTTAAGAATCACTCACTTCAATCGAAACATCGATAAAATTATCGGTTTTCTACTGGATCGCTATTTTC
AGTATTTGGACATCATACCTTTGAGAGAATGTATCTTTTCCATTTTAAGAGAGACAATTATGAACGCCGTTAAGGCGAAT
CAAAAGAGGGTGATTTTTAAGGAAGCGGGTTGGGATATCAAGGATCCGGTTCAATACGAGACGGGAATGGAAAGATTCAA
GGAGAAATTGATCTCCAAGAAAGACCTTTATGCAGATCTTCTTGAACAAAACGGATTGTACGTCCTCGTTACATTCGGTT
TTAATCAGAATAGTTTTCTCCTGAAGGTGGCAAATAACGTTGGCCTTCTTCCCGAAGAGAATCAAAGAATCCAGGAAAGG
ATTTCGAAGGCACGCACGTATAACAATCTTTCGGAGGTTTTCGAAAATCATGGAGACGAATCGGAGGGAGCCGGTTTGGG
ACTTGCGATGTCTCTTCTTATGTTAAAAAACGAAGGAATCGAAGGGGATTCGTATCGAATTAAATCCGAAGAAGGAATTA
CTTCGGCTTATATCAAAATTCCTTTCGAATTTAAGAAAAAAAATACCAATCTTCAAAAAACGGGGGAAATTCTTTCAGAA
TTGGATAATCTGCCCACGTTTCCCGACAATGTAAATCAGATCATGAGTCTGATTAATAAACCGGATTCTTCGATCCATAA
CATCACCGAACTCGTAAGTCGAGATATATCACTTTCTGCGAATATTCTAAAATTGGCAAACTCCGCTTCGTTTTCGCAGA
GGACTAAGGTGGAGAATTTGGAAGGCGCGATCAAAGTCGTCGGTCTTTCCGAATTGAACAGTATTCTTTTGAGCCTGGGA
ACAAAAAGGATTTTGGAGGAAAAATACAAAGAGTTCGAATCGATTTGGGAACGGTCCAGCTTATCGGCGTTTATATGCAG
ACGTCTTGGGGAAAGGATGGGTTGGAAAAAACAGACGATCACCGTTCTGGTTTGCGCGGCTTTATTACACGACGTGGGTC
GTGTGATTTTGCTTTCTCTTGAACCCGATATGTCCGAAAAAATCTCCGAAATTTTAGGAAATCGACTTTTACCTTCTCCG
TTGACTTTGGAAGAAGCCGCATTAGGAATTTCTCATACGACTTTGGGGGGGATGATCTGTGAGAAGTGGAACTTTTCGGA
TACGATTCGGGTTGCCGCGGAGATGCATCACAGACCGCTTTTGGTTAAGAAGGAATTTCAGGATGCGGTGTTTTCGATTT
ATCTTTCGGATATGATTATCGATATTTCCCAAGGCCTCTCCGATTATTTTCTGATTCAATCCGCCGTTCTTCAACATTTC
GGTTTCAAAAAAGAAACCGAGCTGGACGAATTTATGAAAAAAACTCTTCAGGAATATAAGGAATTCGACAGGAAATTCTA
A

Upstream 100 bases:

>100_bases
AAGAACTCTAAACGTAAAGTGCCGGTTGACGAACCTTTAAAGAGTCATAACTTTGTTTGGGACCAAATTCAAACGACCCA
AGTGGAGTTTGGAAGTCCGC

Downstream 100 bases:

>100_bases
ACGTTGTCGAGCTATATTAACGTGAGCAGGGTCGTAAGAAATCCATGATTCATTTTTTGTAGGAAGTTGGAATTCGAACT
TTGTAAATCTATTCTTAAAA

Product: Signal transduction protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 506; Mature: 506

Protein sequence:

>506_residues
MKIQWFHYKKEGYFLSVKNLNEPIESLNPLYLRITHFNRNIDKIIGFLLDRYFQYLDIIPLRECIFSILRETIMNAVKAN
QKRVIFKEAGWDIKDPVQYETGMERFKEKLISKKDLYADLLEQNGLYVLVTFGFNQNSFLLKVANNVGLLPEENQRIQER
ISKARTYNNLSEVFENHGDESEGAGLGLAMSLLMLKNEGIEGDSYRIKSEEGITSAYIKIPFEFKKKNTNLQKTGEILSE
LDNLPTFPDNVNQIMSLINKPDSSIHNITELVSRDISLSANILKLANSASFSQRTKVENLEGAIKVVGLSELNSILLSLG
TKRILEEKYKEFESIWERSSLSAFICRRLGERMGWKKQTITVLVCAALLHDVGRVILLSLEPDMSEKISEILGNRLLPSP
LTLEEAALGISHTTLGGMICEKWNFSDTIRVAAEMHHRPLLVKKEFQDAVFSIYLSDMIIDISQGLSDYFLIQSAVLQHF
GFKKETELDEFMKKTLQEYKEFDRKF

Sequences:

>Translated_506_residues
MKIQWFHYKKEGYFLSVKNLNEPIESLNPLYLRITHFNRNIDKIIGFLLDRYFQYLDIIPLRECIFSILRETIMNAVKAN
QKRVIFKEAGWDIKDPVQYETGMERFKEKLISKKDLYADLLEQNGLYVLVTFGFNQNSFLLKVANNVGLLPEENQRIQER
ISKARTYNNLSEVFENHGDESEGAGLGLAMSLLMLKNEGIEGDSYRIKSEEGITSAYIKIPFEFKKKNTNLQKTGEILSE
LDNLPTFPDNVNQIMSLINKPDSSIHNITELVSRDISLSANILKLANSASFSQRTKVENLEGAIKVVGLSELNSILLSLG
TKRILEEKYKEFESIWERSSLSAFICRRLGERMGWKKQTITVLVCAALLHDVGRVILLSLEPDMSEKISEILGNRLLPSP
LTLEEAALGISHTTLGGMICEKWNFSDTIRVAAEMHHRPLLVKKEFQDAVFSIYLSDMIIDISQGLSDYFLIQSAVLQHF
GFKKETELDEFMKKTLQEYKEFDRKF
>Mature_506_residues
MKIQWFHYKKEGYFLSVKNLNEPIESLNPLYLRITHFNRNIDKIIGFLLDRYFQYLDIIPLRECIFSILRETIMNAVKAN
QKRVIFKEAGWDIKDPVQYETGMERFKEKLISKKDLYADLLEQNGLYVLVTFGFNQNSFLLKVANNVGLLPEENQRIQER
ISKARTYNNLSEVFENHGDESEGAGLGLAMSLLMLKNEGIEGDSYRIKSEEGITSAYIKIPFEFKKKNTNLQKTGEILSE
LDNLPTFPDNVNQIMSLINKPDSSIHNITELVSRDISLSANILKLANSASFSQRTKVENLEGAIKVVGLSELNSILLSLG
TKRILEEKYKEFESIWERSSLSAFICRRLGERMGWKKQTITVLVCAALLHDVGRVILLSLEPDMSEKISEILGNRLLPSP
LTLEEAALGISHTTLGGMICEKWNFSDTIRVAAEMHHRPLLVKKEFQDAVFSIYLSDMIIDISQGLSDYFLIQSAVLQHF
GFKKETELDEFMKKTLQEYKEFDRKF

Specific function: Unknown

COG id: COG1639

COG function: function code T; Predicted signal transduction protein

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR003594
- InterPro:   IPR013976 [H]

Pfam domain/function: PF02518 HATPase_c; PF08668 HDOD [H]

EC number: NA

Molecular weight: Translated: 58142; Mature: 58142

Theoretical pI: Translated: 6.45; Mature: 6.45

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.8 %Cys     (Translated Protein)
2.4 %Met     (Translated Protein)
3.2 %Cys+Met (Translated Protein)
0.8 %Cys     (Mature Protein)
2.4 %Met     (Mature Protein)
3.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKIQWFHYKKEGYFLSVKNLNEPIESLNPLYLRITHFNRNIDKIIGFLLDRYFQYLDIIP
CCEEEEEEECCCEEEEECCCCCHHHHCCCEEEEEEECCCCHHHHHHHHHHHHHHHHHHHH
LRECIFSILRETIMNAVKANQKRVIFKEAGWDIKDPVQYETGMERFKEKLISKKDLYADL
HHHHHHHHHHHHHHHHHHCCCCEEEEECCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHH
LEQNGLYVLVTFGFNQNSFLLKVANNVGLLPEENQRIQERISKARTYNNLSEVFENHGDE
HHCCCCEEEEEECCCCCCEEEEEECCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCC
SEGAGLGLAMSLLMLKNEGIEGDSYRIKSEEGITSAYIKIPFEFKKKNTNLQKTGEILSE
CCCCCHHHHHHHHHHHCCCCCCCCEEEECCCCCCEEEEEECEEECCCCCCHHHHHHHHHH
LDNLPTFPDNVNQIMSLINKPDSSIHNITELVSRDISLSANILKLANSASFSQRTKVENL
HHCCCCCCCCHHHHHHHHCCCCHHHHHHHHHHHCCCCCCHHHHHHHCCCCHHHHHHHHHC
EGAIKVVGLSELNSILLSLGTKRILEEKYKEFESIWERSSLSAFICRRLGERMGWKKQTI
CCCEEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHCCCCHHHH
TVLVCAALLHDVGRVILLSLEPDMSEKISEILGNRLLPSPLTLEEAALGISHTTLGGMIC
HHHHHHHHHHHCCCEEEEECCCCHHHHHHHHHCCCCCCCCCCHHHHHHCCCHHHHHHHHH
EKWNFSDTIRVAAEMHHRPLLVKKEFQDAVFSIYLSDMIIDISQGLSDYFLIQSAVLQHF
CCCCCCHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHC
GFKKETELDEFMKKTLQEYKEFDRKF
CCCCCCCHHHHHHHHHHHHHHHHCCC
>Mature Secondary Structure
MKIQWFHYKKEGYFLSVKNLNEPIESLNPLYLRITHFNRNIDKIIGFLLDRYFQYLDIIP
CCEEEEEEECCCEEEEECCCCCHHHHCCCEEEEEEECCCCHHHHHHHHHHHHHHHHHHHH
LRECIFSILRETIMNAVKANQKRVIFKEAGWDIKDPVQYETGMERFKEKLISKKDLYADL
HHHHHHHHHHHHHHHHHHCCCCEEEEECCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHH
LEQNGLYVLVTFGFNQNSFLLKVANNVGLLPEENQRIQERISKARTYNNLSEVFENHGDE
HHCCCCEEEEEECCCCCCEEEEEECCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCC
SEGAGLGLAMSLLMLKNEGIEGDSYRIKSEEGITSAYIKIPFEFKKKNTNLQKTGEILSE
CCCCCHHHHHHHHHHHCCCCCCCCEEEECCCCCCEEEEEECEEECCCCCCHHHHHHHHHH
LDNLPTFPDNVNQIMSLINKPDSSIHNITELVSRDISLSANILKLANSASFSQRTKVENL
HHCCCCCCCCHHHHHHHHCCCCHHHHHHHHHHHCCCCCCHHHHHHHCCCCHHHHHHHHHC
EGAIKVVGLSELNSILLSLGTKRILEEKYKEFESIWERSSLSAFICRRLGERMGWKKQTI
CCCEEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHCCCCHHHH
TVLVCAALLHDVGRVILLSLEPDMSEKISEILGNRLLPSPLTLEEAALGISHTTLGGMIC
HHHHHHHHHHHCCCEEEEECCCCHHHHHHHHHCCCCCCCCCCHHHHHHCCCHHHHHHHHH
EKWNFSDTIRVAAEMHHRPLLVKKEFQDAVFSIYLSDMIIDISQGLSDYFLIQSAVLQHF
CCCCCCHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHC
GFKKETELDEFMKKTLQEYKEFDRKF
CCCCCCCHHHHHHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 9665876 [H]