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The map label for this gene is yadH [H]

Identifier: 116328996

GI number: 116328996

Start: 2845079

End: 2845840

Strand: Direct

Name: yadH [H]

Synonym: LBL_2398

Alternate gene names: 116328996

Gene position: 2845079-2845840 (Clockwise)

Preceding gene: 116328995

Following gene: 116328997

Centisome position: 78.71

GC content: 43.18

Gene sequence:

>762_bases
ATGAATCTATACGCAATCAAATCCATCTACATTTTCGAAATGTCCAGAACTTGGAGAACGCTCTTTCAAAGTATCGCGTC
TCCCGTCATTTCTACTTCTTTATATTTCGTGGTTTTCGGATCGGCAATCGGTTCTAGGATTCAGGAAGTCGACGGAGTAG
GTTACGGTTCCTTCATCGTTCCGGGCCTTATTATGTTGTCTTTATTGACGGAGAGCATCGCCAATTCCTCTTTTGGAATT
TATTTTCCCAAGTTTACCGGAACGATTTATGAAATTCTCGCGGCGCCGGTTTCCATGATCGAAATCGTAATCGGTTTTGT
GGGCGCCGCCGCAACAAAATCCGTGATCCTCGGAACGATCATGCTCGCCACCGCCTCGCTATTTGTTCCGGTAAAAATCG
CGCATCCCTTTGTGATGATACTTTTTCTGCTGCTAACTTCGATTTCTTTCAGCTTATTCGGGTTCATCATCGGGATCTGG
GCTGAAAATTTTGAAAAGTTACAGATCATTCCCCTACTCATCATCACCCCTCTCGTTTTTTTAGGCGGAAGTTTTTATTC
GGTGAATATGCTCCCTCCTTTTTGGCAGAAATTAACCCTTTTTAATCCTGTCCTCTATTTAGTGAGCGGATTTCGTTGGA
GCTTTTACGAGATAGCAGACGTAAGCGTGGGAATAAGCCTTACAATGGTTTTCGTGTTTCTTTCGATCTGCCTCGGTTTG
GTTTGGCTAATCTTCAGAACGGGATACAAAATTAAAAAATAG

Upstream 100 bases:

>100_bases
CCGCTCTCCTTCAAGATCTCAAAAAGGCAAAAATCGAATTCAAAGATTTGAATACGACCCAAAGCTCTTTAGAGGAAATA
TTCGTTCAATTGGTGTCACA

Downstream 100 bases:

>100_bases
ATTCTGCATATTCAAATTTATTAAATCGATTCTTTTTATTGTAGAATCGATCGCAGAAACACCTCCTGGAATCGTATCAA
AAAGAGGGAGAAACATCGGA

Product: ABC transporter permease

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 253; Mature: 253

Protein sequence:

>253_residues
MNLYAIKSIYIFEMSRTWRTLFQSIASPVISTSLYFVVFGSAIGSRIQEVDGVGYGSFIVPGLIMLSLLTESIANSSFGI
YFPKFTGTIYEILAAPVSMIEIVIGFVGAAATKSVILGTIMLATASLFVPVKIAHPFVMILFLLLTSISFSLFGFIIGIW
AENFEKLQIIPLLIITPLVFLGGSFYSVNMLPPFWQKLTLFNPVLYLVSGFRWSFYEIADVSVGISLTMVFVFLSICLGL
VWLIFRTGYKIKK

Sequences:

>Translated_253_residues
MNLYAIKSIYIFEMSRTWRTLFQSIASPVISTSLYFVVFGSAIGSRIQEVDGVGYGSFIVPGLIMLSLLTESIANSSFGI
YFPKFTGTIYEILAAPVSMIEIVIGFVGAAATKSVILGTIMLATASLFVPVKIAHPFVMILFLLLTSISFSLFGFIIGIW
AENFEKLQIIPLLIITPLVFLGGSFYSVNMLPPFWQKLTLFNPVLYLVSGFRWSFYEIADVSVGISLTMVFVFLSICLGL
VWLIFRTGYKIKK
>Mature_253_residues
MNLYAIKSIYIFEMSRTWRTLFQSIASPVISTSLYFVVFGSAIGSRIQEVDGVGYGSFIVPGLIMLSLLTESIANSSFGI
YFPKFTGTIYEILAAPVSMIEIVIGFVGAAATKSVILGTIMLATASLFVPVKIAHPFVMILFLLLTSISFSLFGFIIGIW
AENFEKLQIIPLLIITPLVFLGGSFYSVNMLPPFWQKLTLFNPVLYLVSGFRWSFYEIADVSVGISLTMVFVFLSICLGL
VWLIFRTGYKIKK

Specific function: Unknown

COG id: COG0842

COG function: function code V; ABC-type multidrug transport system, permease component

Gene ontology:

Cell location: Cell inner membrane; Multi-pass membrane protein [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 ABC transmembrane type-2 domain [H]

Homologues:

Organism=Escherichia coli, GI1786320, Length=255, Percent_Identity=38.4313725490196, Blast_Score=187, Evalue=7e-49,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR000412
- InterPro:   IPR013526
- InterPro:   IPR013525 [H]

Pfam domain/function: PF01061 ABC2_membrane [H]

EC number: NA

Molecular weight: Translated: 28081; Mature: 28081

Theoretical pI: Translated: 9.45; Mature: 9.45

Prosite motif: PS51012 ABC_TM2

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.4 %Cys     (Translated Protein)
3.2 %Met     (Translated Protein)
3.6 %Cys+Met (Translated Protein)
0.4 %Cys     (Mature Protein)
3.2 %Met     (Mature Protein)
3.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNLYAIKSIYIFEMSRTWRTLFQSIASPVISTSLYFVVFGSAIGSRIQEVDGVGYGSFIV
CCCEEEEHEEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHH
PGLIMLSLLTESIANSSFGIYFPKFTGTIYEILAAPVSMIEIVIGFVGAAATKSVILGTI
HHHHHHHHHHHHHCCCCCCEEECHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
MLATASLFVPVKIAHPFVMILFLLLTSISFSLFGFIIGIWAENFEKLQIIPLLIITPLVF
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHH
LGGSFYSVNMLPPFWQKLTLFNPVLYLVSGFRWSFYEIADVSVGISLTMVFVFLSICLGL
HCCCEEEECCCCHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHH
VWLIFRTGYKIKK
HHHHHHCCCCCCC
>Mature Secondary Structure
MNLYAIKSIYIFEMSRTWRTLFQSIASPVISTSLYFVVFGSAIGSRIQEVDGVGYGSFIV
CCCEEEEHEEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHH
PGLIMLSLLTESIANSSFGIYFPKFTGTIYEILAAPVSMIEIVIGFVGAAATKSVILGTI
HHHHHHHHHHHHHCCCCCCEEECHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
MLATASLFVPVKIAHPFVMILFLLLTSISFSLFGFIIGIWAENFEKLQIIPLLIITPLVF
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHH
LGGSFYSVNMLPPFWQKLTLFNPVLYLVSGFRWSFYEIADVSVGISLTMVFVFLSICLGL
HCCCEEEECCCCHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHH
VWLIFRTGYKIKK
HHHHHHCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 11206551; 11258796 [H]