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The map label for this gene is 116328984

Identifier: 116328984

GI number: 116328984

Start: 2828044

End: 2829108

Strand: Direct

Name: 116328984

Synonym: LBL_2386

Alternate gene names: NA

Gene position: 2828044-2829108 (Clockwise)

Preceding gene: 116328967

Following gene: 116328985

Centisome position: 78.24

GC content: 41.78

Gene sequence:

>1065_bases
ATGAATCGTCCTGGAAAATCTTATACCTCTTATTTCCGGAGTAGAAAAACGTTTCACCGTTTCCTCTTTTTATACCCGCT
TCTTTATAGTATTTTAATCATTTTGATATTTGCAACACACGTCGAAGCACAGATCCAAATCGGCGGCCAATACTATTCCG
GTTTACTTTGGGGAGAAAACGAGATTCTTTCCCCCGAATACTACGACGAAGGTTCTTTTTTACGAACGGATCAGGACTTT
ATTCTCACGGCGGGAAGAAACTGGAAAGGCGATCCCCCTCCTTCCCAAGGAAGTTTTTTATTCGAAAGAAAGGAGATCTA
CAACAGCGGGCTTTTTAACAACGAAGCGGTTTCTCTTTTGGAAAAAGGAAAAATCGAAGACAGACTCAGAGCAATTTCCA
TGTTGGAGGAAGGTGTACGTTTCGATCCTAAATTTTTTCCCTTCCGATATAACTTAGGCCGCGCATACCACCTGGAAAAA
AAATATCAAAAGTCCATCATACAATTCGAATACGCAAGCGCAGAAATACCGGAATATTACAGAACCTTCATTCACTTGGG
AACGTTGTATGAAATTATACGAGAACCGATCAACGCCACAATTCTCTGGAAAAAAGCGGTTTCGCTTAACAAATTCCACA
CGGAAGCCCTTCTACTTTTGGCGGACCACTACATCCGAACCGATCTCAAAAACCGCGCCCTCATTTACATCAAAGAAGCC
GCAAGAATCGACGAACAAAGCCCGGATGCGAGAATGGGAAGAGCGAGAATCGAGCTTCTTTCCTCCAAGGATCTCTATGC
TTATAGAATTTTTAAGAATACGGAACTTGTGGACGATTTGGGGCAGAAGAAACAGTACAATAAGAAGTTTCATTTTTTTT
ACGCCGAAACGGCAAGTAAAGTAGGAGATTATGTCACTGCGGCGGATCAATACGAACAACTTCTAAAATATCCGAACGAT
CCGTTCTTTTCCGAATTCTCGTATAAGGTGATCGAAAGAAGAAGAGATCTCGCAAAACGATTCGCCGAAATCAAGTCCAT
GGAAGAAGAAAACAAAACCGAATGA

Upstream 100 bases:

>100_bases
GTTAGGAACGAACGGATCTGCGATCCGAAACTTTGGAGTTTTCCCGATTAAATTATGCCAATTTCCAAGAAGGAAAATCA
CAAAACTTAAGAAATAGGTT

Downstream 100 bases:

>100_bases
AAAAGGTTTGCTTTTTTCAATTTTCCTCCGTTATTTTGAGCTTGGAGGAATTTATGAAAAAAACCACCTGGCTCACAATC
CTGTTTATCCTCCTTAACAT

Product: TPR repeat-containing protein

Products: NA

Alternate protein names: TPR Repeat-Containing Protein; TPR Repeat-Containing Signal Peptide

Number of amino acids: Translated: 354; Mature: 354

Protein sequence:

>354_residues
MNRPGKSYTSYFRSRKTFHRFLFLYPLLYSILIILIFATHVEAQIQIGGQYYSGLLWGENEILSPEYYDEGSFLRTDQDF
ILTAGRNWKGDPPPSQGSFLFERKEIYNSGLFNNEAVSLLEKGKIEDRLRAISMLEEGVRFDPKFFPFRYNLGRAYHLEK
KYQKSIIQFEYASAEIPEYYRTFIHLGTLYEIIREPINATILWKKAVSLNKFHTEALLLLADHYIRTDLKNRALIYIKEA
ARIDEQSPDARMGRARIELLSSKDLYAYRIFKNTELVDDLGQKKQYNKKFHFFYAETASKVGDYVTAADQYEQLLKYPND
PFFSEFSYKVIERRRDLAKRFAEIKSMEEENKTE

Sequences:

>Translated_354_residues
MNRPGKSYTSYFRSRKTFHRFLFLYPLLYSILIILIFATHVEAQIQIGGQYYSGLLWGENEILSPEYYDEGSFLRTDQDF
ILTAGRNWKGDPPPSQGSFLFERKEIYNSGLFNNEAVSLLEKGKIEDRLRAISMLEEGVRFDPKFFPFRYNLGRAYHLEK
KYQKSIIQFEYASAEIPEYYRTFIHLGTLYEIIREPINATILWKKAVSLNKFHTEALLLLADHYIRTDLKNRALIYIKEA
ARIDEQSPDARMGRARIELLSSKDLYAYRIFKNTELVDDLGQKKQYNKKFHFFYAETASKVGDYVTAADQYEQLLKYPND
PFFSEFSYKVIERRRDLAKRFAEIKSMEEENKTE
>Mature_354_residues
MNRPGKSYTSYFRSRKTFHRFLFLYPLLYSILIILIFATHVEAQIQIGGQYYSGLLWGENEILSPEYYDEGSFLRTDQDF
ILTAGRNWKGDPPPSQGSFLFERKEIYNSGLFNNEAVSLLEKGKIEDRLRAISMLEEGVRFDPKFFPFRYNLGRAYHLEK
KYQKSIIQFEYASAEIPEYYRTFIHLGTLYEIIREPINATILWKKAVSLNKFHTEALLLLADHYIRTDLKNRALIYIKEA
ARIDEQSPDARMGRARIELLSSKDLYAYRIFKNTELVDDLGQKKQYNKKFHFFYAETASKVGDYVTAADQYEQLLKYPND
PFFSEFSYKVIERRRDLAKRFAEIKSMEEENKTE

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 41877; Mature: 41877

Theoretical pI: Translated: 8.99; Mature: 8.99

Prosite motif: PS50293 TPR_REGION

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
1.1 %Met     (Translated Protein)
1.1 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
1.1 %Met     (Mature Protein)
1.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNRPGKSYTSYFRSRKTFHRFLFLYPLLYSILIILIFATHVEAQIQIGGQYYSGLLWGEN
CCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCEEEEEECCHHHCCEEECCC
EILSPEYYDEGSFLRTDQDFILTAGRNWKGDPPPSQGSFLFERKEIYNSGLFNNEAVSLL
CCCCCCCCCCCCEEECCCCEEEECCCCCCCCCCCCCCCCHHHHHHHHHCCCCCHHHHHHH
EKGKIEDRLRAISMLEEGVRFDPKFFPFRYNLGRAYHLEKKYQKSIIQFEYASAEIPEYY
HHCCHHHHHHHHHHHHHCCCCCCCCCCEEECCCCEEHHHHHHHHHHHHHCCCCCCCHHHH
RTFIHLGTLYEIIREPINATILWKKAVSLNKFHTEALLLLADHYIRTDLKNRALIYIKEA
HHHHHHHHHHHHHHCCCCEEEEEHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEEECH
ARIDEQSPDARMGRARIELLSSKDLYAYRIFKNTELVDDLGQKKQYNKKFHFFYAETASK
HHCCCCCCCHHHHHHHHHHHCCCCCEEEEEECCCHHHHHHHHHHHCCCEEEEEEEHHHHH
VGDYVTAADQYEQLLKYPNDPFFSEFSYKVIERRRDLAKRFAEIKSMEEENKTE
HHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCC
>Mature Secondary Structure
MNRPGKSYTSYFRSRKTFHRFLFLYPLLYSILIILIFATHVEAQIQIGGQYYSGLLWGEN
CCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCEEEEEECCHHHCCEEECCC
EILSPEYYDEGSFLRTDQDFILTAGRNWKGDPPPSQGSFLFERKEIYNSGLFNNEAVSLL
CCCCCCCCCCCCEEECCCCEEEECCCCCCCCCCCCCCCCHHHHHHHHHCCCCCHHHHHHH
EKGKIEDRLRAISMLEEGVRFDPKFFPFRYNLGRAYHLEKKYQKSIIQFEYASAEIPEYY
HHCCHHHHHHHHHHHHHCCCCCCCCCCEEECCCCEEHHHHHHHHHHHHHCCCCCCCHHHH
RTFIHLGTLYEIIREPINATILWKKAVSLNKFHTEALLLLADHYIRTDLKNRALIYIKEA
HHHHHHHHHHHHHHCCCCEEEEEHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEEECH
ARIDEQSPDARMGRARIELLSSKDLYAYRIFKNTELVDDLGQKKQYNKKFHFFYAETASK
HHCCCCCCCHHHHHHHHHHHCCCCCEEEEEECCCHHHHHHHHHHHCCCEEEEEEEHHHHH
VGDYVTAADQYEQLLKYPNDPFFSEFSYKVIERRRDLAKRFAEIKSMEEENKTE
HHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA