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The map label for this gene is 116328968

Identifier: 116328968

GI number: 116328968

Start: 2809795

End: 2810505

Strand: Reverse

Name: 116328968

Synonym: LBL_2369

Alternate gene names: NA

Gene position: 2810505-2809795 (Counterclockwise)

Preceding gene: 116328969

Following gene: 116328965

Centisome position: 77.76

GC content: 37.13

Gene sequence:

>711_bases
ATGCAAACAGAATCAACTCAACTTCAAAAACCGGATTTAACAATTCATAGAATTTTCGAGACATTGAGCGTCATCGCTTT
CGTTCTTCTTTCGATTTATCTCGGTTATCAACTTGCCGGGATCTTTTCGAACATGTTCGTATCTCATTTTTATTTGGTAC
CTTTGGTGGTCTTATTTTCTTGGCTCGGAGCTGATTTTATTTCGGGATTGGTCCACTTTTTAGGAGATAGTGTAGGTTCT
GAAAAGACTCCTATTTTCGGACCTGCGTTTATTTTTCCTTTTAGAGATCATCACGTTGATCCGAAGGGAATCACGAGACA
TGATTTTATAGAAACCAACGGAAACAATTGTTTGGTTTCTTTGCCTATTTTAATATATTATGTTTTCTTTTGGGAATCGA
GCGGCTTGTTAAGTTTCTTACTCGCCGTGTTTTGGTTCTTTCTCCTTTTGGGAATTTTTGCGACTAATCAGATTCATAAA
TGGGCGCACCAAGATTCCCCTTTCGTGTTTATACGAACTTTACAAAAATATAAACTGATTCTTGGTCCGGAACATCATAA
GATCCACCATACTTTTCCCTACGATACGTATTTTTGTATCACGACGGGTTGGTTGAATCTGATTTTGAAGTTCTTGAGGT
TTTACGAAAGTCTTCGCTGGATTTTAAGAATTCCTTCTCCTGTCAAATTAGAAACAACTTCCGAAAAATGA

Upstream 100 bases:

>100_bases
AGCTGCTATAAAGTTTCATTTTTTTTCAAATCAAGGCTTCCTTTTCGGAAAAAATCTCGCCTGAATTCTTATCTATAATA
AGAATACACTAGACAGTCGC

Downstream 100 bases:

>100_bases
CGGGTAAACAAGCGAGGATAAAATAACCTTCTCCTAGGATTCTGTAAATCTGATTTTTTTGAAAAGAATTTTCGAAAATA
AGAATATTTACCGGTATCCA

Product: hypothetical protein

Products: NA

Alternate protein names: Carotenoid Synthesis Regulator Carf

Number of amino acids: Translated: 236; Mature: 236

Protein sequence:

>236_residues
MQTESTQLQKPDLTIHRIFETLSVIAFVLLSIYLGYQLAGIFSNMFVSHFYLVPLVVLFSWLGADFISGLVHFLGDSVGS
EKTPIFGPAFIFPFRDHHVDPKGITRHDFIETNGNNCLVSLPILIYYVFFWESSGLLSFLLAVFWFFLLLGIFATNQIHK
WAHQDSPFVFIRTLQKYKLILGPEHHKIHHTFPYDTYFCITTGWLNLILKFLRFYESLRWILRIPSPVKLETTSEK

Sequences:

>Translated_236_residues
MQTESTQLQKPDLTIHRIFETLSVIAFVLLSIYLGYQLAGIFSNMFVSHFYLVPLVVLFSWLGADFISGLVHFLGDSVGS
EKTPIFGPAFIFPFRDHHVDPKGITRHDFIETNGNNCLVSLPILIYYVFFWESSGLLSFLLAVFWFFLLLGIFATNQIHK
WAHQDSPFVFIRTLQKYKLILGPEHHKIHHTFPYDTYFCITTGWLNLILKFLRFYESLRWILRIPSPVKLETTSEK
>Mature_236_residues
MQTESTQLQKPDLTIHRIFETLSVIAFVLLSIYLGYQLAGIFSNMFVSHFYLVPLVVLFSWLGADFISGLVHFLGDSVGS
EKTPIFGPAFIFPFRDHHVDPKGITRHDFIETNGNNCLVSLPILIYYVFFWESSGLLSFLLAVFWFFLLLGIFATNQIHK
WAHQDSPFVFIRTLQKYKLILGPEHHKIHHTFPYDTYFCITTGWLNLILKFLRFYESLRWILRIPSPVKLETTSEK

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

Organism=Homo sapiens, GI40806193, Length=183, Percent_Identity=48.0874316939891, Blast_Score=149, Evalue=2e-36,
Organism=Homo sapiens, GI241982751, Length=183, Percent_Identity=47.5409836065574, Blast_Score=142, Evalue=3e-34,
Organism=Homo sapiens, GI40806190, Length=168, Percent_Identity=49.4047619047619, Blast_Score=139, Evalue=2e-33,
Organism=Caenorhabditis elegans, GI17510231, Length=214, Percent_Identity=41.588785046729, Blast_Score=145, Evalue=3e-35,
Organism=Drosophila melanogaster, GI19921580, Length=192, Percent_Identity=41.6666666666667, Blast_Score=142, Evalue=2e-34,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 27484; Mature: 27484

Theoretical pI: Translated: 7.82; Mature: 7.82

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.8 %Cys     (Translated Protein)
0.8 %Met     (Translated Protein)
1.7 %Cys+Met (Translated Protein)
0.8 %Cys     (Mature Protein)
0.8 %Met     (Mature Protein)
1.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MQTESTQLQKPDLTIHRIFETLSVIAFVLLSIYLGYQLAGIFSNMFVSHFYLVPLVVLFS
CCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
WLGADFISGLVHFLGDSVGSEKTPIFGPAFIFPFRDHHVDPKGITRHDFIETNGNNCLVS
HHHHHHHHHHHHHHHCCCCCCCCCCCCCEEEECCHHCCCCCCCCCHHHCEEECCCCEEEE
LPILIYYVFFWESSGLLSFLLAVFWFFLLLGIFATNQIHKWAHQDSPFVFIRTLQKYKLI
HHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEHHHHHHHHHHH
LGPEHHKIHHTFPYDTYFCITTGWLNLILKFLRFYESLRWILRIPSPVKLETTSEK
CCCCCCEEEEECCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEECCCCCC
>Mature Secondary Structure
MQTESTQLQKPDLTIHRIFETLSVIAFVLLSIYLGYQLAGIFSNMFVSHFYLVPLVVLFS
CCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
WLGADFISGLVHFLGDSVGSEKTPIFGPAFIFPFRDHHVDPKGITRHDFIETNGNNCLVS
HHHHHHHHHHHHHHHCCCCCCCCCCCCCEEEECCHHCCCCCCCCCHHHCEEECCCCEEEE
LPILIYYVFFWESSGLLSFLLAVFWFFLLLGIFATNQIHKWAHQDSPFVFIRTLQKYKLI
HHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEHHHHHHHHHHH
LGPEHHKIHHTFPYDTYFCITTGWLNLILKFLRFYESLRWILRIPSPVKLETTSEK
CCCCCCEEEEECCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEECCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA