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The map label for this gene is 116328928

Identifier: 116328928

GI number: 116328928

Start: 2746921

End: 2747421

Strand: Reverse

Name: 116328928

Synonym: LBL_2323

Alternate gene names: NA

Gene position: 2747421-2746921 (Counterclockwise)

Preceding gene: 116328929

Following gene: 116328927

Centisome position: 76.01

GC content: 42.91

Gene sequence:

>501_bases
ATGAATCCACTTTATTTACAATCTTTTGGAGAATCCGAAGATGCGAAGAAGCATTTTTTGACCGCTTACGAGTATCAAAC
CAAGGGAAATCTCAAACTGGCTTCCAAACATTATAGAATGTCCATCGCAGCAAAACCTACGGCGGAAGCTTGGACGTTTT
TGGGTTGGTCTTATTCCCTTGCCGGTAAATTGGAGCGTGCGATTGAGTTCTGTAAAATCGCGATCGAAACGGACCCTACA
TTAGGAAATCCTTATAATGATATCGGGGTTTATCTGCTTCAGCAAAAACGTTTCGAGGAGGCGCTTCCTTGGTTTGAAAA
GGCGAAGTTCGCTCCTCGTTACGAGGTTCCCGTATATCCGTACTTCAACGCAGGTTCTTGTTTAGAAATTTTAGGCCATA
TTGAACTCGCTCGTTTGGAATACGAAAAAGCCATTCAAATTCAGCCGAATTATCCTCCGGCAAACCTCGCTCTAAAGCGG
ATTTACATTCGTTATAACTGA

Upstream 100 bases:

>100_bases
CTATATAACAATTTTTCTCCGGAGATAGACGGCTTTTTAAATACGACCTTTCTGAAATTCTTGAATTTTTCCGTGAAATA
AATCCCGTCTAAAGTGTAGA

Downstream 100 bases:

>100_bases
CAATGTAAAGTCCGAATTCTTGCCGGGAAACTCAGTAGGTTTCTCCCTTAACTCAATAGCGTTCCCTGCCATAACGTTAC
CCACAATTACTTGGATCTGA

Product: pilus assembly protein

Products: NA

Alternate protein names: TPR-Repeat-Containing Protein; Peptidase S1 And S6 Chymotrypsin/Hap; Tetratricopeptide TPR_2 Repeat Protein

Number of amino acids: Translated: 166; Mature: 166

Protein sequence:

>166_residues
MNPLYLQSFGESEDAKKHFLTAYEYQTKGNLKLASKHYRMSIAAKPTAEAWTFLGWSYSLAGKLERAIEFCKIAIETDPT
LGNPYNDIGVYLLQQKRFEEALPWFEKAKFAPRYEVPVYPYFNAGSCLEILGHIELARLEYEKAIQIQPNYPPANLALKR
IYIRYN

Sequences:

>Translated_166_residues
MNPLYLQSFGESEDAKKHFLTAYEYQTKGNLKLASKHYRMSIAAKPTAEAWTFLGWSYSLAGKLERAIEFCKIAIETDPT
LGNPYNDIGVYLLQQKRFEEALPWFEKAKFAPRYEVPVYPYFNAGSCLEILGHIELARLEYEKAIQIQPNYPPANLALKR
IYIRYN
>Mature_166_residues
MNPLYLQSFGESEDAKKHFLTAYEYQTKGNLKLASKHYRMSIAAKPTAEAWTFLGWSYSLAGKLERAIEFCKIAIETDPT
LGNPYNDIGVYLLQQKRFEEALPWFEKAKFAPRYEVPVYPYFNAGSCLEILGHIELARLEYEKAIQIQPNYPPANLALKR
IYIRYN

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 19241; Mature: 19241

Theoretical pI: Translated: 8.56; Mature: 8.56

Prosite motif: PS50005 TPR ; PS50293 TPR_REGION

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.2 %Cys     (Translated Protein)
1.2 %Met     (Translated Protein)
2.4 %Cys+Met (Translated Protein)
1.2 %Cys     (Mature Protein)
1.2 %Met     (Mature Protein)
2.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNPLYLQSFGESEDAKKHFLTAYEYQTKGNLKLASKHYRMSIAAKPTAEAWTFLGWSYSL
CCCEEECCCCCCCCHHHHHEEEEEEECCCCEEEECCEEEEEEECCCCCHHEEEECCCHHH
AGKLERAIEFCKIAIETDPTLGNPYNDIGVYLLQQKRFEEALPWFEKAKFAPRYEVPVYP
HHHHHHHHHHHEEEEECCCCCCCCCHHHHHHHHHHHHHHHHCCHHHHHCCCCCCCCCCEE
YFNAGSCLEILGHIELARLEYEKAIQIQPNYPPANLALKRIYIRYN
ECCCCCHHHHHHHHHHEEECCCEEEEECCCCCCHHEEEEEEEEEEC
>Mature Secondary Structure
MNPLYLQSFGESEDAKKHFLTAYEYQTKGNLKLASKHYRMSIAAKPTAEAWTFLGWSYSL
CCCEEECCCCCCCCHHHHHEEEEEEECCCCEEEECCEEEEEEECCCCCHHEEEECCCHHH
AGKLERAIEFCKIAIETDPTLGNPYNDIGVYLLQQKRFEEALPWFEKAKFAPRYEVPVYP
HHHHHHHHHHHEEEEECCCCCCCCCHHHHHHHHHHHHHHHHCCHHHHHCCCCCCCCCCEE
YFNAGSCLEILGHIELARLEYEKAIQIQPNYPPANLALKRIYIRYN
ECCCCCHHHHHHHHHHEEECCCEEEEECCCCCCHHEEEEEEEEEEC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA