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The map label for this gene is 116328889

Identifier: 116328889

GI number: 116328889

Start: 2699089

End: 2700093

Strand: Reverse

Name: 116328889

Synonym: LBL_2280

Alternate gene names: NA

Gene position: 2700093-2699089 (Counterclockwise)

Preceding gene: 116328890

Following gene: 116328888

Centisome position: 74.7

GC content: 39.7

Gene sequence:

>1005_bases
TTGTTATTGCCATTCTCGGCTTTGTTTAAATACGATTTAAAATTAGAATACGCAGCGGTGGTTCCGTTCTTTATGGATTT
TATCTTTTCAACTTCCAACAATTTTTGGTTCTGGGTAGTCGTTTTAGAAAAATTAATTCTTTTCTTTTTTTGGAAATTCT
CTCCGAAACAAGTCATGTATGTTTACAAAGTCCTTCAAACAAAATATAAAAGATTCTTCAAACTTTCAAGCCATGGGAGG
CCGACTCGGGACGATTACTGGGATATATATTATCAGATTAAGGATATATTAAGAGACAATCTGGATTGGGGAGCTTCTAA
AATTCATGGCGAGATTTTAAAACTCGGCTTTGATCCTTCTTTGTCTTTAGTAAAGCGTATCATCACGAGGATCTTGAAAA
GATCCAATCCGTCGGGTAATTGGAAATCCTGGTGGAAATTATTCGATCATCTCAAAAGTGAAGTCGTAGCAATGGATCTT
TGCAGGATTCAAACTATTTACGGTACTACTTTGTATGCTCTTGCATTTATCGAGCGCTCTTCGAGAAAAATCATACATTT
GAATATCACGGAACACCCGACCAGAGCTTGGGTTTTACGCCAAATCGAGGAGACTAAGTCTCTTTGTCTCAGGTTTCAAA
CTTTGTTAAGCGACAATGACGTTTTGTTCTCGGGTCAAATAATTCTCAATGGTTTGCAGGAATTGGGAATTCAATCTCTT
CACACACCTCCCGCTTCCCCTTGGTGCAACGGCATCATGGAACGGTGGTTCGGTTCTTTACGGAGGGAATGTCTCAATCA
TATCCCGATCTTTTCTTTACATCATGCGCACCGCGTTGCGCAGGAATACGTTGATTACTACAATCATTGGAGGCCTCATC
TGGCCTTAAACAAGGATTCTCCTTGTGGTAGGGTCGTTACATTTCCAACTCCTACCTCCAAAGTTATCAAACGAAAAGTT
TTGGGCGGGTTACACCATGTTTATCTTAATTCAGAGGTCGCTTAA

Upstream 100 bases:

>100_bases
CGTTGTTCTATGTATGTAAAATTCCGGAATCTGGCATCTAACACCTAACCATTCAAACTATGCTTGTCTATGTTATAATC
TGAATTGAACTCTGTTCTTC

Downstream 100 bases:

>100_bases
TAATATGTTATCTTTTTTGCATTTTGTCAAATTCTAACATACTATACAAACGACGGTTTTTGGACTAGCACATTGGAATC
GGTGTTTTGAGAAAGTTAAA

Product: transposase IS1477

Products: NA

Alternate protein names: Transposase; Integrase; Integrase Catalytic Subunit; LOW QUALITY PROTEIN Integrase; Transposase IS; Tranposase

Number of amino acids: Translated: 334; Mature: 334

Protein sequence:

>334_residues
MLLPFSALFKYDLKLEYAAVVPFFMDFIFSTSNNFWFWVVVLEKLILFFFWKFSPKQVMYVYKVLQTKYKRFFKLSSHGR
PTRDDYWDIYYQIKDILRDNLDWGASKIHGEILKLGFDPSLSLVKRIITRILKRSNPSGNWKSWWKLFDHLKSEVVAMDL
CRIQTIYGTTLYALAFIERSSRKIIHLNITEHPTRAWVLRQIEETKSLCLRFQTLLSDNDVLFSGQIILNGLQELGIQSL
HTPPASPWCNGIMERWFGSLRRECLNHIPIFSLHHAHRVAQEYVDYYNHWRPHLALNKDSPCGRVVTFPTPTSKVIKRKV
LGGLHHVYLNSEVA

Sequences:

>Translated_334_residues
MLLPFSALFKYDLKLEYAAVVPFFMDFIFSTSNNFWFWVVVLEKLILFFFWKFSPKQVMYVYKVLQTKYKRFFKLSSHGR
PTRDDYWDIYYQIKDILRDNLDWGASKIHGEILKLGFDPSLSLVKRIITRILKRSNPSGNWKSWWKLFDHLKSEVVAMDL
CRIQTIYGTTLYALAFIERSSRKIIHLNITEHPTRAWVLRQIEETKSLCLRFQTLLSDNDVLFSGQIILNGLQELGIQSL
HTPPASPWCNGIMERWFGSLRRECLNHIPIFSLHHAHRVAQEYVDYYNHWRPHLALNKDSPCGRVVTFPTPTSKVIKRKV
LGGLHHVYLNSEVA
>Mature_334_residues
MLLPFSALFKYDLKLEYAAVVPFFMDFIFSTSNNFWFWVVVLEKLILFFFWKFSPKQVMYVYKVLQTKYKRFFKLSSHGR
PTRDDYWDIYYQIKDILRDNLDWGASKIHGEILKLGFDPSLSLVKRIITRILKRSNPSGNWKSWWKLFDHLKSEVVAMDL
CRIQTIYGTTLYALAFIERSSRKIIHLNITEHPTRAWVLRQIEETKSLCLRFQTLLSDNDVLFSGQIILNGLQELGIQSL
HTPPASPWCNGIMERWFGSLRRECLNHIPIFSLHHAHRVAQEYVDYYNHWRPHLALNKDSPCGRVVTFPTPTSKVIKRKV
LGGLHHVYLNSEVA

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 39418; Mature: 39418

Theoretical pI: Translated: 9.99; Mature: 9.99

Prosite motif: PS50994 INTEGRASE

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.5 %Cys     (Translated Protein)
1.5 %Met     (Translated Protein)
3.0 %Cys+Met (Translated Protein)
1.5 %Cys     (Mature Protein)
1.5 %Met     (Mature Protein)
3.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MLLPFSALFKYDLKLEYAAVVPFFMDFIFSTSNNFWFWVVVLEKLILFFFWKFSPKQVMY
CCCCHHHHHHHHCCHHHHHHHHHHHHHHHHCCCCCEEHHHHHHHHHHHHHHCCCHHHHHH
VYKVLQTKYKRFFKLSSHGRPTRDDYWDIYYQIKDILRDNLDWGASKIHGEILKLGFDPS
HHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHCCCCCC
LSLVKRIITRILKRSNPSGNWKSWWKLFDHLKSEVVAMDLCRIQTIYGTTLYALAFIERS
HHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHC
SRKIIHLNITEHPTRAWVLRQIEETKSLCLRFQTLLSDNDVLFSGQIILNGLQELGIQSL
CCEEEEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEECHHHHHHHHHCCHHHC
HTPPASPWCNGIMERWFGSLRRECLNHIPIFSLHHAHRVAQEYVDYYNHWRPHLALNKDS
CCCCCCHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHCCCCCEEECCCC
PCGRVVTFPTPTSKVIKRKVLGGLHHVYLNSEVA
CCCCEEECCCCHHHHHHHHHHHHHHHEEECCCCC
>Mature Secondary Structure
MLLPFSALFKYDLKLEYAAVVPFFMDFIFSTSNNFWFWVVVLEKLILFFFWKFSPKQVMY
CCCCHHHHHHHHCCHHHHHHHHHHHHHHHHCCCCCEEHHHHHHHHHHHHHHCCCHHHHHH
VYKVLQTKYKRFFKLSSHGRPTRDDYWDIYYQIKDILRDNLDWGASKIHGEILKLGFDPS
HHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHCCCCCC
LSLVKRIITRILKRSNPSGNWKSWWKLFDHLKSEVVAMDLCRIQTIYGTTLYALAFIERS
HHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHC
SRKIIHLNITEHPTRAWVLRQIEETKSLCLRFQTLLSDNDVLFSGQIILNGLQELGIQSL
CCEEEEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEECHHHHHHHHHCCHHHC
HTPPASPWCNGIMERWFGSLRRECLNHIPIFSLHHAHRVAQEYVDYYNHWRPHLALNKDS
CCCCCCHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHCCCCCEEECCCC
PCGRVVTFPTPTSKVIKRKVLGGLHHVYLNSEVA
CCCCEEECCCCHHHHHHHHHHHHHHHEEECCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA