| Definition | Leptospira borgpetersenii serovar Hardjo-bovis L550 chromosome 1, complete sequence. |
|---|---|
| Accession | NC_008508 |
| Length | 3,614,446 |
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The map label for this gene is 116328864
Identifier: 116328864
GI number: 116328864
Start: 2649137
End: 2649892
Strand: Reverse
Name: 116328864
Synonym: LBL_2248
Alternate gene names: NA
Gene position: 2649892-2649137 (Counterclockwise)
Preceding gene: 116328866
Following gene: 116328862
Centisome position: 73.31
GC content: 35.85
Gene sequence:
>756_bases TTGGAGTGTATAATGTTCAGGAATTTAAAAAGAAATAGCGTTTTGTTTTTCTGTATCGGATCTTTATTTTTTTCTTTTTC TTCGGTTTTCGCTTTAGGAACTTATTCGGAAGGTTGGGCGGTTGTGAGACTGATTCAGTTTGAAAGTCGAGGAATCATTT TCGATTCCCAGGAAGGTCTTTTAGAATTTACCACTTATGATAAATCTGAAAAGTGTGAAGCGTCAAAAGATGAATGTTTT ACTCCTTTGAAAGAAAAGATCGAATTTTCCGTTCGCCCTGAAAATGGAGAAGTCGTAAATTTTTTAAATAATAACGTAAA CCAGGAGATTTTAGTTCAGTATAGGGTTCATAAAATTGAGCCAATTGCTCTTTCTACGGATTTTGAAGTAATCGGAGCAC AAAAACAAATTACTACGATTCCAAAAGAGGCGCCGGATAAAATTATCGTGAATAAATCTGGATCAAGAAGAAATTTTTCT GTTTCTGGAAGAATTCTTAAATTAGAATATCAAGGAACTATAATTGGGACTTATGAGGGTTTGTATCTGGATGAAGTTCG AGGCAAGGTCCACCCTTTTTCCGTAACCAACGAGGAAGTTGCCGCGTTTGCTTGGAATACGATGAAATTCGGAACTAAAT ATTATATCGGTGTTTCCGTTGCCTTTGCGACCGGTTGGAGAAAGTCGGATTATGATATTTTTGAAATTAATTATAATTCT TCCGCCGGAGGGGTATATACGGATTCAAAGAAGTAA
Upstream 100 bases:
>100_bases TGATACGGTTTTTTAGGGTAATTTTTTGAATCGATTAAATATTTCTTGAAAATGAAATGTTATCCTTACATTGTTTCAAT TTTAAAAACTTAAGAAAATT
Downstream 100 bases:
>100_bases CTGAATTTCTTTAAGGGGACCTCTATAAAGTAGATTTTAGAATTCTTGAATGTCGTAAACGTACGGTGATTTCAACATAG GAATTCTTTACAGCGCGTCC
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 251; Mature: 251
Protein sequence:
>251_residues MECIMFRNLKRNSVLFFCIGSLFFSFSSVFALGTYSEGWAVVRLIQFESRGIIFDSQEGLLEFTTYDKSEKCEASKDECF TPLKEKIEFSVRPENGEVVNFLNNNVNQEILVQYRVHKIEPIALSTDFEVIGAQKQITTIPKEAPDKIIVNKSGSRRNFS VSGRILKLEYQGTIIGTYEGLYLDEVRGKVHPFSVTNEEVAAFAWNTMKFGTKYYIGVSVAFATGWRKSDYDIFEINYNS SAGGVYTDSKK
Sequences:
>Translated_251_residues MECIMFRNLKRNSVLFFCIGSLFFSFSSVFALGTYSEGWAVVRLIQFESRGIIFDSQEGLLEFTTYDKSEKCEASKDECF TPLKEKIEFSVRPENGEVVNFLNNNVNQEILVQYRVHKIEPIALSTDFEVIGAQKQITTIPKEAPDKIIVNKSGSRRNFS VSGRILKLEYQGTIIGTYEGLYLDEVRGKVHPFSVTNEEVAAFAWNTMKFGTKYYIGVSVAFATGWRKSDYDIFEINYNS SAGGVYTDSKK >Mature_251_residues MECIMFRNLKRNSVLFFCIGSLFFSFSSVFALGTYSEGWAVVRLIQFESRGIIFDSQEGLLEFTTYDKSEKCEASKDECF TPLKEKIEFSVRPENGEVVNFLNNNVNQEILVQYRVHKIEPIALSTDFEVIGAQKQITTIPKEAPDKIIVNKSGSRRNFS VSGRILKLEYQGTIIGTYEGLYLDEVRGKVHPFSVTNEEVAAFAWNTMKFGTKYYIGVSVAFATGWRKSDYDIFEINYNS SAGGVYTDSKK
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 28529; Mature: 28529
Theoretical pI: Translated: 5.91; Mature: 5.91
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.6 %Cys (Translated Protein) 1.2 %Met (Translated Protein) 2.8 %Cys+Met (Translated Protein) 1.6 %Cys (Mature Protein) 1.2 %Met (Mature Protein) 2.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MECIMFRNLKRNSVLFFCIGSLFFSFSSVFALGTYSEGWAVVRLIQFESRGIIFDSQEGL CCEEEEECCCCCCEEEEEHHHHHHHHHHHEEEECCCCCEEEEEEEEECCCCEEEECCCCE LEFTTYDKSEKCEASKDECFTPLKEKIEFSVRPENGEVVNFLNNNVNQEILVQYRVHKIE EEEEECCCCCCCCCCCCHHCCCCHHCEEEEEECCCCCEEEEECCCCCCEEEEEEEEEEEC PIALSTDFEVIGAQKQITTIPKEAPDKIIVNKSGSRRNFSVSGRILKLEYQGTIIGTYEG EEEEECCCEEECCCCCEEECCCCCCCEEEEECCCCCCEEEECCEEEEEEECCEEEEEECC LYLDEVRGKVHPFSVTNEEVAAFAWNTMKFGTKYYIGVSVAFATGWRKSDYDIFEINYNS EEEEHHCCCCCCEEECCCCEEEEEEEEEECCCEEEEEEEEEEEECCCCCCCEEEEEEECC SAGGVYTDSKK CCCCEEECCCC >Mature Secondary Structure MECIMFRNLKRNSVLFFCIGSLFFSFSSVFALGTYSEGWAVVRLIQFESRGIIFDSQEGL CCEEEEECCCCCCEEEEEHHHHHHHHHHHEEEECCCCCEEEEEEEEECCCCEEEECCCCE LEFTTYDKSEKCEASKDECFTPLKEKIEFSVRPENGEVVNFLNNNVNQEILVQYRVHKIE EEEEECCCCCCCCCCCCHHCCCCHHCEEEEEECCCCCEEEEECCCCCCEEEEEEEEEEEC PIALSTDFEVIGAQKQITTIPKEAPDKIIVNKSGSRRNFSVSGRILKLEYQGTIIGTYEG EEEEECCCEEECCCCCEEECCCCCCCEEEEECCCCCCEEEECCEEEEEEECCEEEEEECC LYLDEVRGKVHPFSVTNEEVAAFAWNTMKFGTKYYIGVSVAFATGWRKSDYDIFEINYNS EEEEHHCCCCCCEEECCCCEEEEEEEEEECCCEEEEEEEEEEEECCCCCCCEEEEEEECC SAGGVYTDSKK CCCCEEECCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA