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The map label for this gene is 116328789

Identifier: 116328789

GI number: 116328789

Start: 2543193

End: 2544758

Strand: Reverse

Name: 116328789

Synonym: LBL_2164

Alternate gene names: NA

Gene position: 2544758-2543193 (Counterclockwise)

Preceding gene: 116328796

Following gene: 116328787

Centisome position: 70.41

GC content: 42.98

Gene sequence:

>1566_bases
ATGATCTTTGTCATTCTCGTAGCCATTGGAATTATTTTGATCTTTGCGTCTGGATCCTTCCTGATTCAGACTAAGAAAGA
CGCTTATGAAAAGGCTCTGGCCCTTGCTGCAATGGGGAATTATGTGGACGCCCGAGTGATGATTCGGGATATTTTGGATA
ATTCTCCTTCGAATGTCCGAGCGCATTATGTGATCGCAAAAATCTATGCGATGGAGGGAGATACGATCAACGAGGCCCGG
CACCTCGAGAAAATCAAAAAAATCGGAACATACGAAAAGGGAATCAACGCGGTAGTCGTTTCCAACCGAATCGCGGATAT
CTATTACCAGCAGGACTTATTCGAAGAAGCTCTCTTCCATTATTTGGATACCGTAACAATCGATCCGGAAAACCCGGAAG
CGAATGTTCGAATCGGTTTTATGGCTTTAGGTCAAAAAGAATTCATGATCGCAGATCGATTCCTCGGTAAAATTTCCGAC
GAAAAAATCAAAACCGCTTCCATTTTTATAGGGAAGGGAGTGATCTCTGCGATTCTTCGGAAAGGAAATCCGGTTGATTT
TTTTGCCAAAGCGTACGATCTCGAGCCTTCTTCTCCGGTTGGAGGTTTTTTGTATGCTCTGAGTTTGACTAGAGACGGTA
AATACGACGAAGCCGTTCGAATCGCAAATTCCGTTGCAGATCTGATTGAAGACGATTACATACGTTATACGATCTTTCAG
TTTTTGATGTGTTGTTTTATTCTTCAAAAAAATTTGGGCGAGGCTCTCAAACATGCAAGGCTCTGTATGGAGATGGCGAG
GAACAGCGGTTGGAAACAGGAGATGATCGATTCCGACGTTTATTTTTCCCTTTTGGCGGTCAAACTCGGTAAATTTGAAG
AAGCGAGCGAATATCTCATCGAGGCCGAGTCTGAAAGGATCGACGATCAAAGAATTTTGGAACTCGCGAACTACAAGTTT
CAATTGGAGACCAAAAGAATCGAAGCGAATAAAGCCGCACCGGGAGGTTTTTCCTTGGATGACGAGATTGCAAGAATTTT
CGGCGAACTCTTTCCAGTGGAACGTTTTTATGAACTCTCCGGACTTAAGTCCTCCAAATCTTTTCATATCAAAGGGATCT
TGGACGATCAAGGTAATAAACTTCTTTCGGACGTTTCTAAAATCGGAGTCGGAGTTTTGGATCACTATCGTCAATTGAAA
GGGGTGGAATTTAAGAATCTCTGTGTTCGAGTTGTGATGGCTCTGAACTATACCGTGAGTCGCGAAGTTCCCAACAAGGA
AGGGGACGGTCTCAATCTTACGGGTCTAAACAAAGCGGACAAGGAAACCCGTTCCTTATTTAAATTCCGTAAATGGAAGG
ACGCCAAAATTTCGGATATTTTTCTCCGGGATACGATCGGTCAGTTGAATGAATTGGGTTTGGATAAGGCATTTATCATC
GGAGATGCGGAATTTACGGAAGGCGCTAAACGTTTTCTTGCGGATAACTCTTCCTTACTCGACGTAATTTCCGGAAAAGA
CTTGGAGGAAATTCTTAAAAAAGCACTTCATCAAGAGGCAAAATAA

Upstream 100 bases:

>100_bases
TAAAATGATTGAATTTATCCCAAGACTGGATAATGCCCGAACTCAATTTCCGGGATTTTATCCATTTACCAACCGGAACC
TGAAAGAAAAACAAAAAAAA

Downstream 100 bases:

>100_bases
GCATAATGTTAAAACGCTGCGAGAATGTTGAAGTGTGTTTCCTATTTTGAAAAGGTGTAGGATTTTTTGCGTTTTCGACG
GAATCGTTCGCATTTTCAAC

Product: TPR repeat-containing protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 521; Mature: 521

Protein sequence:

>521_residues
MIFVILVAIGIILIFASGSFLIQTKKDAYEKALALAAMGNYVDARVMIRDILDNSPSNVRAHYVIAKIYAMEGDTINEAR
HLEKIKKIGTYEKGINAVVVSNRIADIYYQQDLFEEALFHYLDTVTIDPENPEANVRIGFMALGQKEFMIADRFLGKISD
EKIKTASIFIGKGVISAILRKGNPVDFFAKAYDLEPSSPVGGFLYALSLTRDGKYDEAVRIANSVADLIEDDYIRYTIFQ
FLMCCFILQKNLGEALKHARLCMEMARNSGWKQEMIDSDVYFSLLAVKLGKFEEASEYLIEAESERIDDQRILELANYKF
QLETKRIEANKAAPGGFSLDDEIARIFGELFPVERFYELSGLKSSKSFHIKGILDDQGNKLLSDVSKIGVGVLDHYRQLK
GVEFKNLCVRVVMALNYTVSREVPNKEGDGLNLTGLNKADKETRSLFKFRKWKDAKISDIFLRDTIGQLNELGLDKAFII
GDAEFTEGAKRFLADNSSLLDVISGKDLEEILKKALHQEAK

Sequences:

>Translated_521_residues
MIFVILVAIGIILIFASGSFLIQTKKDAYEKALALAAMGNYVDARVMIRDILDNSPSNVRAHYVIAKIYAMEGDTINEAR
HLEKIKKIGTYEKGINAVVVSNRIADIYYQQDLFEEALFHYLDTVTIDPENPEANVRIGFMALGQKEFMIADRFLGKISD
EKIKTASIFIGKGVISAILRKGNPVDFFAKAYDLEPSSPVGGFLYALSLTRDGKYDEAVRIANSVADLIEDDYIRYTIFQ
FLMCCFILQKNLGEALKHARLCMEMARNSGWKQEMIDSDVYFSLLAVKLGKFEEASEYLIEAESERIDDQRILELANYKF
QLETKRIEANKAAPGGFSLDDEIARIFGELFPVERFYELSGLKSSKSFHIKGILDDQGNKLLSDVSKIGVGVLDHYRQLK
GVEFKNLCVRVVMALNYTVSREVPNKEGDGLNLTGLNKADKETRSLFKFRKWKDAKISDIFLRDTIGQLNELGLDKAFII
GDAEFTEGAKRFLADNSSLLDVISGKDLEEILKKALHQEAK
>Mature_521_residues
MIFVILVAIGIILIFASGSFLIQTKKDAYEKALALAAMGNYVDARVMIRDILDNSPSNVRAHYVIAKIYAMEGDTINEAR
HLEKIKKIGTYEKGINAVVVSNRIADIYYQQDLFEEALFHYLDTVTIDPENPEANVRIGFMALGQKEFMIADRFLGKISD
EKIKTASIFIGKGVISAILRKGNPVDFFAKAYDLEPSSPVGGFLYALSLTRDGKYDEAVRIANSVADLIEDDYIRYTIFQ
FLMCCFILQKNLGEALKHARLCMEMARNSGWKQEMIDSDVYFSLLAVKLGKFEEASEYLIEAESERIDDQRILELANYKF
QLETKRIEANKAAPGGFSLDDEIARIFGELFPVERFYELSGLKSSKSFHIKGILDDQGNKLLSDVSKIGVGVLDHYRQLK
GVEFKNLCVRVVMALNYTVSREVPNKEGDGLNLTGLNKADKETRSLFKFRKWKDAKISDIFLRDTIGQLNELGLDKAFII
GDAEFTEGAKRFLADNSSLLDVISGKDLEEILKKALHQEAK

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 58679; Mature: 58679

Theoretical pI: Translated: 5.48; Mature: 5.48

Prosite motif: PS50005 TPR ; PS50293 TPR_REGION

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.8 %Cys     (Translated Protein)
2.1 %Met     (Translated Protein)
2.9 %Cys+Met (Translated Protein)
0.8 %Cys     (Mature Protein)
2.1 %Met     (Mature Protein)
2.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MIFVILVAIGIILIFASGSFLIQTKKDAYEKALALAAMGNYVDARVMIRDILDNSPSNVR
CHHHHHHHHHHHHHHCCCCEEEEECHHHHHHHHHHHHHCCHHHHHHHHHHHHCCCCCCCC
AHYVIAKIYAMEGDTINEARHLEKIKKIGTYEKGINAVVVSNRIADIYYQQDLFEEALFH
CEEEEEEEEEECCCCHHHHHHHHHHHHHCCHHCCCCEEEECCHHHHHHHHHHHHHHHHHH
YLDTVTIDPENPEANVRIGFMALGQKEFMIADRFLGKISDEKIKTASIFIGKGVISAILR
HHHCEEECCCCCCCCEEEEEEEECCHHHHHHHHHHHCCCCCCEEEHHEEHHHHHHHHHHH
KGNPVDFFAKAYDLEPSSPVGGFLYALSLTRDGKYDEAVRIANSVADLIEDDYIRYTIFQ
CCCCHHHHHHHCCCCCCCCCCCEEEEEEECCCCCHHHHHHHHHHHHHHHHCCHHHHHHHH
FLMCCFILQKNLGEALKHARLCMEMARNSGWKQEMIDSDVYFSLLAVKLGKFEEASEYLI
HHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHCHHHHHHHHHHHHCCCHHHHHHHH
EAESERIDDQRILELANYKFQLETKRIEANKAAPGGFSLDDEIARIFGELFPVERFYELS
HHHHHHCCHHHHHHHHCCEEEEEEEEEECCCCCCCCCCCHHHHHHHHHHHCCHHHHHHHH
GLKSSKSFHIKGILDDQGNKLLSDVSKIGVGVLDHYRQLKGVEFKNLCVRVVMALNYTVS
CCCCCCCEEEEEEECCCCCHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHCCHHC
REVPNKEGDGLNLTGLNKADKETRSLFKFRKWKDAKISDIFLRDTIGQLNELGLDKAFII
CCCCCCCCCCCEECCCCCCHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHCCCCCEEEE
GDAEFTEGAKRFLADNSSLLDVISGKDLEEILKKALHQEAK
CCHHHHHHHHHHHCCCCCHHHHHCCCCHHHHHHHHHHHCCC
>Mature Secondary Structure
MIFVILVAIGIILIFASGSFLIQTKKDAYEKALALAAMGNYVDARVMIRDILDNSPSNVR
CHHHHHHHHHHHHHHCCCCEEEEECHHHHHHHHHHHHHCCHHHHHHHHHHHHCCCCCCCC
AHYVIAKIYAMEGDTINEARHLEKIKKIGTYEKGINAVVVSNRIADIYYQQDLFEEALFH
CEEEEEEEEEECCCCHHHHHHHHHHHHHCCHHCCCCEEEECCHHHHHHHHHHHHHHHHHH
YLDTVTIDPENPEANVRIGFMALGQKEFMIADRFLGKISDEKIKTASIFIGKGVISAILR
HHHCEEECCCCCCCCEEEEEEEECCHHHHHHHHHHHCCCCCCEEEHHEEHHHHHHHHHHH
KGNPVDFFAKAYDLEPSSPVGGFLYALSLTRDGKYDEAVRIANSVADLIEDDYIRYTIFQ
CCCCHHHHHHHCCCCCCCCCCCEEEEEEECCCCCHHHHHHHHHHHHHHHHCCHHHHHHHH
FLMCCFILQKNLGEALKHARLCMEMARNSGWKQEMIDSDVYFSLLAVKLGKFEEASEYLI
HHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHCHHHHHHHHHHHHCCCHHHHHHHH
EAESERIDDQRILELANYKFQLETKRIEANKAAPGGFSLDDEIARIFGELFPVERFYELS
HHHHHHCCHHHHHHHHCCEEEEEEEEEECCCCCCCCCCCHHHHHHHHHHHCCHHHHHHHH
GLKSSKSFHIKGILDDQGNKLLSDVSKIGVGVLDHYRQLKGVEFKNLCVRVVMALNYTVS
CCCCCCCEEEEEEECCCCCHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHCCHHC
REVPNKEGDGLNLTGLNKADKETRSLFKFRKWKDAKISDIFLRDTIGQLNELGLDKAFII
CCCCCCCCCCCEECCCCCCHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHCCCCCEEEE
GDAEFTEGAKRFLADNSSLLDVISGKDLEEILKKALHQEAK
CCHHHHHHHHHHHCCCCCHHHHHCCCCHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA