Click here to switch to the map view.

The map label for this gene is ybeB [C]

Identifier: 116328786

GI number: 116328786

Start: 2539732

End: 2540106

Strand: Reverse

Name: ybeB [C]

Synonym: LBL_2161

Alternate gene names: 116328786

Gene position: 2540106-2539732 (Counterclockwise)

Preceding gene: 116328787

Following gene: 116328785

Centisome position: 70.28

GC content: 36.53

Gene sequence:

>375_bases
ATGAGTCCTACTCTGCCGAAACAAAATCCGACTACCGAAAAAGTTCTTCAAGTCATCTACGATATTATGGTGGATAAAAA
ATGCGAAGAAATCAGCATTTTGAATTTAGAAAGTGTCAATAGTTATTTGAGTTTCTTTGTAATTTGCACTGTCAATTCTG
CGGTTCAAGCGAATGCGGTCGCAAGAGAAATCAGAAAAACATTAAAAGAATATAAACTAACCCATAAAGAAGTGGATAAA
ACGGGAACTTCTACGAATTCGGGTTGGACGCTTTTGGACTTCGGAGAAATCATCATTCACATTATGACTCCGGAAAAAAG
GGAATATTATAATTTGGATAGGCTTTGGCGGGATGCTAAAAGAATGGAACTCTAA

Upstream 100 bases:

>100_bases
ATTAGAAAAAGCTGAAGTGCATCATGTGTTAAGAAAGGACTTGGGTTTGGATGCAACCGTCGTCGTCGGTTCCGATTACG
AACCGAGAAAATAGAGATTC

Downstream 100 bases:

>100_bases
AGGAGACGCAGTCCCGATCGGTCTAACGAAATGATTTTTAATTCAGCGGTTTTTATTTACTTTTTTATAGCCGTATTGAC
GGTTTGTTATTTTTTTGCCG

Product: hypothetical protein

Products: NA

Alternate protein names: Iojap-Related Protein; Iojap Family Protein; Iojap Protein; Iojap Protein Family; Iojap Superfamily Protein; Plant Iojap-Like Protein; Iojap-Like Protein Protein; Iojap Superfamily Ortholog; Conserved Domain Protein; Iojap-Like Family Protein; Iojap Domain-Containing Protein; Iojap Protein -Like Protein; YqeL Protein

Number of amino acids: Translated: 124; Mature: 123

Protein sequence:

>124_residues
MSPTLPKQNPTTEKVLQVIYDIMVDKKCEEISILNLESVNSYLSFFVICTVNSAVQANAVAREIRKTLKEYKLTHKEVDK
TGTSTNSGWTLLDFGEIIIHIMTPEKREYYNLDRLWRDAKRMEL

Sequences:

>Translated_124_residues
MSPTLPKQNPTTEKVLQVIYDIMVDKKCEEISILNLESVNSYLSFFVICTVNSAVQANAVAREIRKTLKEYKLTHKEVDK
TGTSTNSGWTLLDFGEIIIHIMTPEKREYYNLDRLWRDAKRMEL
>Mature_123_residues
SPTLPKQNPTTEKVLQVIYDIMVDKKCEEISILNLESVNSYLSFFVICTVNSAVQANAVAREIRKTLKEYKLTHKEVDKT
GTSTNSGWTLLDFGEIIIHIMTPEKREYYNLDRLWRDAKRMEL

Specific function: Unknown

COG id: COG0799

COG function: function code S; Uncharacterized homolog of plant Iojap protein

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 14400; Mature: 14269

Theoretical pI: Translated: 7.42; Mature: 7.42

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.6 %Cys     (Translated Protein)
3.2 %Met     (Translated Protein)
4.8 %Cys+Met (Translated Protein)
1.6 %Cys     (Mature Protein)
2.4 %Met     (Mature Protein)
4.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSPTLPKQNPTTEKVLQVIYDIMVDKKCEEISILNLESVNSYLSFFVICTVNSAVQANAV
CCCCCCCCCCCHHHHHHHHHHHHHCCCCCHHEECCHHHHHHHHHHHHHHHCCCHHHHHHH
AREIRKTLKEYKLTHKEVDKTGTSTNSGWTLLDFGEIIIHIMTPEKREYYNLDRLWRDAK
HHHHHHHHHHHHHHHHHHHHCCCCCCCCEEEEEHHHHHEEECCCCCHHHHCHHHHHHHHH
RMEL
HCCC
>Mature Secondary Structure 
SPTLPKQNPTTEKVLQVIYDIMVDKKCEEISILNLESVNSYLSFFVICTVNSAVQANAV
CCCCCCCCCCHHHHHHHHHHHHHCCCCCHHEECCHHHHHHHHHHHHHHHCCCHHHHHHH
AREIRKTLKEYKLTHKEVDKTGTSTNSGWTLLDFGEIIIHIMTPEKREYYNLDRLWRDAK
HHHHHHHHHHHHHHHHHHHHCCCCCCCCEEEEEHHHHHEEECCCCCHHHHCHHHHHHHHH
RMEL
HCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA