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The map label for this gene is 116328779

Identifier: 116328779

GI number: 116328779

Start: 2527205

End: 2528323

Strand: Reverse

Name: 116328779

Synonym: LBL_2154

Alternate gene names: NA

Gene position: 2528323-2527205 (Counterclockwise)

Preceding gene: 116328780

Following gene: 116328778

Centisome position: 69.95

GC content: 42.36

Gene sequence:

>1119_bases
TTGAATCAGAAAAGAGTAGGGCAAATTCTCCGCGAGGCGAGAGAAGAAAAAAAACTCAGTGTTAAAGATGTAGCAAAAGA
AACGAATATCTCGGTGAAATACATTCTTGCACTTGAGACCGAGGATTATTCCCAGTTTCCGGGTGAGACTTTCACGATGG
GTTTTTTGAAAAATTACGGGAGTTATCTTAAACTCGATACCGGACAACTCATCAACTTGTATCGGGGAGAAAAGATCGAA
GAATCCCAAGCCCCACTCGAAGAGTTAACTCGCCCGACGGCTTCGTATTATACGAAAATCAATATGGATAAAAACAAGAT
CTTTACGATTGCGTCCGTACTAATCATCCTTATCTCCGCATATCTCATCATAGATAGTTTTGTAGGCTCTTCTTCCGGGA
ACGATGCGGTGGAGGAATCCGGTAAAAAGCTGGATATTCCCGAGGACATCGATTTCCTTTCCCGTTCTATTCCGGAAAAT
CGAAGCGAATCTTTCATTCTCACACCCGATAAGGGAGTAAGTTTTTCCGTGAGCAATCAACAGTGTAAGCTGTTTATCGA
TTCGGTGGAAAAAGGAGGCGCCTTAAATACTGCAGTTCTTGCGTTTAACGTATATCCGGAACTTGCGGTGTATAAATTTC
GTCTGAGCGAGGGACAGGAAAAAGTCCTGAGTTATACGATTCCGGAAATTTCAAGTCTTAGACGTAACGTTCGAATCATT
GCTCAAGCGGTCACTGAAAATTCCGCAAAAGTTCTTGTGACCTTAAGCGAAGAGGAACAAAAACAGGAAAACAAGAATCA
TACGGTGGATAATACAAAAACGTTAGGTGACGTTCCGATTCAAGTAACTCTGTTTTTCAACAAGGTGAGTTATGCGGAAT
TTATCATCGATGGCCAGATGGGATTTAGAGGCCTTGTCCAAGCGAATGAAACTAAAAGTCTAGAAGCAAAGGATCGTCTC
GAACTGAAAGTAGGGGATGGTTCCGCCGTGGAGATGATTCAAAACGGGAAACCTAAGATTACCTTAGGACGTCCTGGAAA
ACTCGTGAAGAAGATATTCGTGAAAACGCAGAACCCTTATGATAGTACTCAGTCCATTATCAAGGAGTTGGGAGAATAG

Upstream 100 bases:

>100_bases
AAGACGGACAGTTCAACTTTCATATCGGCGGAAACGCAAAAATTATAAACAACCCGCTTGTGTCGGAACAATAACCCTCA
GTTCTAGAAGGAGAGAAACT

Downstream 100 bases:

>100_bases
GATTTTTGAATAAGAAATTCTACATCACCACTCTCGGTTGCCCCAAAAATACCGCGGACTCTATGAGTATGCATCATTCT
CTTTTGGAGGAAGGATTTAC

Product: transcriptional regulator

Products: NA

Alternate protein names: Transcriptional Regulator

Number of amino acids: Translated: 372; Mature: 372

Protein sequence:

>372_residues
MNQKRVGQILREAREEKKLSVKDVAKETNISVKYILALETEDYSQFPGETFTMGFLKNYGSYLKLDTGQLINLYRGEKIE
ESQAPLEELTRPTASYYTKINMDKNKIFTIASVLIILISAYLIIDSFVGSSSGNDAVEESGKKLDIPEDIDFLSRSIPEN
RSESFILTPDKGVSFSVSNQQCKLFIDSVEKGGALNTAVLAFNVYPELAVYKFRLSEGQEKVLSYTIPEISSLRRNVRII
AQAVTENSAKVLVTLSEEEQKQENKNHTVDNTKTLGDVPIQVTLFFNKVSYAEFIIDGQMGFRGLVQANETKSLEAKDRL
ELKVGDGSAVEMIQNGKPKITLGRPGKLVKKIFVKTQNPYDSTQSIIKELGE

Sequences:

>Translated_372_residues
MNQKRVGQILREAREEKKLSVKDVAKETNISVKYILALETEDYSQFPGETFTMGFLKNYGSYLKLDTGQLINLYRGEKIE
ESQAPLEELTRPTASYYTKINMDKNKIFTIASVLIILISAYLIIDSFVGSSSGNDAVEESGKKLDIPEDIDFLSRSIPEN
RSESFILTPDKGVSFSVSNQQCKLFIDSVEKGGALNTAVLAFNVYPELAVYKFRLSEGQEKVLSYTIPEISSLRRNVRII
AQAVTENSAKVLVTLSEEEQKQENKNHTVDNTKTLGDVPIQVTLFFNKVSYAEFIIDGQMGFRGLVQANETKSLEAKDRL
ELKVGDGSAVEMIQNGKPKITLGRPGKLVKKIFVKTQNPYDSTQSIIKELGE
>Mature_372_residues
MNQKRVGQILREAREEKKLSVKDVAKETNISVKYILALETEDYSQFPGETFTMGFLKNYGSYLKLDTGQLINLYRGEKIE
ESQAPLEELTRPTASYYTKINMDKNKIFTIASVLIILISAYLIIDSFVGSSSGNDAVEESGKKLDIPEDIDFLSRSIPEN
RSESFILTPDKGVSFSVSNQQCKLFIDSVEKGGALNTAVLAFNVYPELAVYKFRLSEGQEKVLSYTIPEISSLRRNVRII
AQAVTENSAKVLVTLSEEEQKQENKNHTVDNTKTLGDVPIQVTLFFNKVSYAEFIIDGQMGFRGLVQANETKSLEAKDRL
ELKVGDGSAVEMIQNGKPKITLGRPGKLVKKIFVKTQNPYDSTQSIIKELGE

Specific function: Unknown

COG id: COG1426

COG function: function code S; Uncharacterized protein conserved in bacteria

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 41613; Mature: 41613

Theoretical pI: Translated: 5.42; Mature: 5.42

Prosite motif: PS50943 HTH_CROC1

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.3 %Cys     (Translated Protein)
1.3 %Met     (Translated Protein)
1.6 %Cys+Met (Translated Protein)
0.3 %Cys     (Mature Protein)
1.3 %Met     (Mature Protein)
1.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNQKRVGQILREAREEKKLSVKDVAKETNISVKYILALETEDYSQFPGETFTMGFLKNYG
CCHHHHHHHHHHHHHHHCCCHHHHHHHCCCEEEEEEEEECCCHHHCCCCEEEHHHHHCCC
SYLKLDTGQLINLYRGEKIEESQAPLEELTRPTASYYTKINMDKNKIFTIASVLIILISA
CEEEECCCHHHHHHCCCCCCHHCCCHHHHHCCCHHHEEEEECCCHHHHHHHHHHHHHHHH
YLIIDSFVGSSSGNDAVEESGKKLDIPEDIDFLSRSIPENRSESFILTPDKGVSFSVSNQ
HHHHHHHHCCCCCCHHHHHCCCCCCCCCHHHHHHHCCCCCCCCCEEEECCCCCEEEECCC
QCKLFIDSVEKGGALNTAVLAFNVYPELAVYKFRLSEGQEKVLSYTIPEISSLRRNVRII
EEEEEEECCCCCCCCEEEEEEEECCCCEEEEEEECCCCHHHHHHCCCHHHHHHHHHHHHH
AQAVTENSAKVLVTLSEEEQKQENKNHTVDNTKTLGDVPIQVTLFFNKVSYAEFIIDGQM
HHHHCCCCCEEEEEECCHHHHHHCCCCCCCCCCCCCCCCEEEEEEEECCCEEEEEEECCC
GFRGLVQANETKSLEAKDRLELKVGDGSAVEMIQNGKPKITLGRPGKLVKKIFVKTQNPY
CCCEEEECCCCCCCCCCCCEEEEECCCHHHHHHHCCCCEEEECCCHHHHHHHHHHCCCCC
DSTQSIIKELGE
HHHHHHHHHHCC
>Mature Secondary Structure
MNQKRVGQILREAREEKKLSVKDVAKETNISVKYILALETEDYSQFPGETFTMGFLKNYG
CCHHHHHHHHHHHHHHHCCCHHHHHHHCCCEEEEEEEEECCCHHHCCCCEEEHHHHHCCC
SYLKLDTGQLINLYRGEKIEESQAPLEELTRPTASYYTKINMDKNKIFTIASVLIILISA
CEEEECCCHHHHHHCCCCCCHHCCCHHHHHCCCHHHEEEEECCCHHHHHHHHHHHHHHHH
YLIIDSFVGSSSGNDAVEESGKKLDIPEDIDFLSRSIPENRSESFILTPDKGVSFSVSNQ
HHHHHHHHCCCCCCHHHHHCCCCCCCCCHHHHHHHCCCCCCCCCEEEECCCCCEEEECCC
QCKLFIDSVEKGGALNTAVLAFNVYPELAVYKFRLSEGQEKVLSYTIPEISSLRRNVRII
EEEEEEECCCCCCCCEEEEEEEECCCCEEEEEEECCCCHHHHHHCCCHHHHHHHHHHHHH
AQAVTENSAKVLVTLSEEEQKQENKNHTVDNTKTLGDVPIQVTLFFNKVSYAEFIIDGQM
HHHHCCCCCEEEEEECCHHHHHHCCCCCCCCCCCCCCCCEEEEEEEECCCEEEEEEECCC
GFRGLVQANETKSLEAKDRLELKVGDGSAVEMIQNGKPKITLGRPGKLVKKIFVKTQNPY
CCCEEEECCCCCCCCCCCCEEEEECCCHHHHHHHCCCCEEEECCCHHHHHHHHHHCCCCC
DSTQSIIKELGE
HHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA