Click here to switch to the map view.

The map label for this gene is 116328760

Identifier: 116328760

GI number: 116328760

Start: 2500323

End: 2501321

Strand: Direct

Name: 116328760

Synonym: LBL_2134

Alternate gene names: NA

Gene position: 2500323-2501321 (Clockwise)

Preceding gene: 116328752

Following gene: 116328764

Centisome position: 69.18

GC content: 39.74

Gene sequence:

>999_bases
TTGCCATTCTCGCCTTTGTTTAAATACGATTTAAAATTAGAATATGCAGCGGTGGTTCCGTTCTTTATGGATTTTATCTT
TTCAACTTCCAACAATTTTTGGTTCTGGGTAGTCGTTTTAGAAAAATTAATTCTTTTCTTTTTTTGGAAATTCTCTCCGA
AACAAGTCATGTATGTTTACAAAGTCCTTCAAACAAAATATAAAAGATTCTTCAAACTTTCAAGCCATGGGAGGCCGACT
CGGGACGATTACTGGGATATATATTATCAGATTAAGGATATATTAAGAGACAATCTGGATTGGGGAGCTTCTAAAATTCA
TGGCGAGATTTTAAAACTCGGCTTTGATCCTTCTTTGTCTTTAGTAAAGCGTATCATCACGAGGATCTTGAAAAGATCCA
ATCCGTCGGGTAATTGGAAATCCTGGTGGAAATTATTCGATCATCTCAAAAGTGAAGTCGTAGCAATGGATCTTTGCAGG
ATTCAAACTATTTACGGTACTACTTTGTATGCTCTTGCATTTATCGAGCGCTCTTCGAGAAAAATCATACATTTGAATAT
CACGGAACACCCGACCAGAGCTTGGGTTTTACGCCAAATCGAGGAGACTAAGTCTCTTTGTCTCAGGTTTCAAACTTTGT
TAAGCGACAATGACGTTTTGTTCTCGGGTCAAATAATTCTCAATGGTTTGCAGGAATTGGGAATTCAATCTCTTCACACA
CCTCCCGCTTCCCCTTGGTGCAACGGCATCATGGAACGGTGGTTCGGTTCTTTACGGAGGGAATGTCTCAATCATATCCC
GATCTTTTCTTTACATCATGCGCACCGCGTTGCGCAGGAATACGTTGATTACTACAATCATTGGAGGCCTCATCTGGCCT
TAAACAAGGATTCTCCTTGTGGTAGGGTCGTTACATTTCCAACTCCTACCTCCAAAGTTATCAAACGAAAAGTTTTGGGC
GGGTTACACCATGTTTATCTTAATTCAGAGGTCGCTTAA

Upstream 100 bases:

>100_bases
AGGACGTTGTTCTATGTATGTAAAATTCCGGAATCTGGCATCTAACACCTAACCATTCAAATTATGTTATAATCTGAATT
GAACTCTGTTCTTCTTGTCA

Downstream 100 bases:

>100_bases
TAATATGTCATCTTTTTTGCATTTTGTCAAATTCTAACATACTATACAAACGACGGTTTTTGGACTAGCACAAGTTGTCT
CAAATCAATTTTTGGGTTTT

Product: transposase IS1477

Products: NA

Alternate protein names: Transposase; Integrase; Integrase Catalytic Subunit; LOW QUALITY PROTEIN Integrase; Transposase IS; Tranposase

Number of amino acids: Translated: 332; Mature: 331

Protein sequence:

>332_residues
MPFSPLFKYDLKLEYAAVVPFFMDFIFSTSNNFWFWVVVLEKLILFFFWKFSPKQVMYVYKVLQTKYKRFFKLSSHGRPT
RDDYWDIYYQIKDILRDNLDWGASKIHGEILKLGFDPSLSLVKRIITRILKRSNPSGNWKSWWKLFDHLKSEVVAMDLCR
IQTIYGTTLYALAFIERSSRKIIHLNITEHPTRAWVLRQIEETKSLCLRFQTLLSDNDVLFSGQIILNGLQELGIQSLHT
PPASPWCNGIMERWFGSLRRECLNHIPIFSLHHAHRVAQEYVDYYNHWRPHLALNKDSPCGRVVTFPTPTSKVIKRKVLG
GLHHVYLNSEVA

Sequences:

>Translated_332_residues
MPFSPLFKYDLKLEYAAVVPFFMDFIFSTSNNFWFWVVVLEKLILFFFWKFSPKQVMYVYKVLQTKYKRFFKLSSHGRPT
RDDYWDIYYQIKDILRDNLDWGASKIHGEILKLGFDPSLSLVKRIITRILKRSNPSGNWKSWWKLFDHLKSEVVAMDLCR
IQTIYGTTLYALAFIERSSRKIIHLNITEHPTRAWVLRQIEETKSLCLRFQTLLSDNDVLFSGQIILNGLQELGIQSLHT
PPASPWCNGIMERWFGSLRRECLNHIPIFSLHHAHRVAQEYVDYYNHWRPHLALNKDSPCGRVVTFPTPTSKVIKRKVLG
GLHHVYLNSEVA
>Mature_331_residues
PFSPLFKYDLKLEYAAVVPFFMDFIFSTSNNFWFWVVVLEKLILFFFWKFSPKQVMYVYKVLQTKYKRFFKLSSHGRPTR
DDYWDIYYQIKDILRDNLDWGASKIHGEILKLGFDPSLSLVKRIITRILKRSNPSGNWKSWWKLFDHLKSEVVAMDLCRI
QTIYGTTLYALAFIERSSRKIIHLNITEHPTRAWVLRQIEETKSLCLRFQTLLSDNDVLFSGQIILNGLQELGIQSLHTP
PASPWCNGIMERWFGSLRRECLNHIPIFSLHHAHRVAQEYVDYYNHWRPHLALNKDSPCGRVVTFPTPTSKVIKRKVLGG
LHHVYLNSEVA

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 39218; Mature: 39087

Theoretical pI: Translated: 9.99; Mature: 9.99

Prosite motif: PS50994 INTEGRASE

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.5 %Cys     (Translated Protein)
1.5 %Met     (Translated Protein)
3.0 %Cys+Met (Translated Protein)
1.5 %Cys     (Mature Protein)
1.2 %Met     (Mature Protein)
2.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MPFSPLFKYDLKLEYAAVVPFFMDFIFSTSNNFWFWVVVLEKLILFFFWKFSPKQVMYVY
CCCCCCCHHCCCCHHHHHHHHHHHHHHHCCCCCEEHHHHHHHHHHHHHHCCCHHHHHHHH
KVLQTKYKRFFKLSSHGRPTRDDYWDIYYQIKDILRDNLDWGASKIHGEILKLGFDPSLS
HHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHCCCCCCHH
LVKRIITRILKRSNPSGNWKSWWKLFDHLKSEVVAMDLCRIQTIYGTTLYALAFIERSSR
HHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC
KIIHLNITEHPTRAWVLRQIEETKSLCLRFQTLLSDNDVLFSGQIILNGLQELGIQSLHT
EEEEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEECHHHHHHHHHCCHHHCCC
PPASPWCNGIMERWFGSLRRECLNHIPIFSLHHAHRVAQEYVDYYNHWRPHLALNKDSPC
CCCCHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHCCCCCEEECCCCCC
GRVVTFPTPTSKVIKRKVLGGLHHVYLNSEVA
CCEEECCCCHHHHHHHHHHHHHHHEEECCCCC
>Mature Secondary Structure 
PFSPLFKYDLKLEYAAVVPFFMDFIFSTSNNFWFWVVVLEKLILFFFWKFSPKQVMYVY
CCCCCCHHCCCCHHHHHHHHHHHHHHHCCCCCEEHHHHHHHHHHHHHHCCCHHHHHHHH
KVLQTKYKRFFKLSSHGRPTRDDYWDIYYQIKDILRDNLDWGASKIHGEILKLGFDPSLS
HHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHCCCCCCHH
LVKRIITRILKRSNPSGNWKSWWKLFDHLKSEVVAMDLCRIQTIYGTTLYALAFIERSSR
HHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC
KIIHLNITEHPTRAWVLRQIEETKSLCLRFQTLLSDNDVLFSGQIILNGLQELGIQSLHT
EEEEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEECHHHHHHHHHCCHHHCCC
PPASPWCNGIMERWFGSLRRECLNHIPIFSLHHAHRVAQEYVDYYNHWRPHLALNKDSPC
CCCCHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHCCCCCEEECCCCCC
GRVVTFPTPTSKVIKRKVLGGLHHVYLNSEVA
CCEEECCCCHHHHHHHHHHHHHHHEEECCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA