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The map label for this gene is 116328751

Identifier: 116328751

GI number: 116328751

Start: 2488698

End: 2489516

Strand: Direct

Name: 116328751

Synonym: LBL_2125

Alternate gene names: NA

Gene position: 2488698-2489516 (Clockwise)

Preceding gene: 116328743

Following gene: 116328752

Centisome position: 68.85

GC content: 42.74

Gene sequence:

>819_bases
ATGACAGGAATCTACAATAGGATCGGTCCGGAACTGACTCCAGTAGTCCGTACCTTATTGATTTTAAACGGCGGAATCTT
CGCGGTTCAACTCTTACTTTCCTGGACGATAGGAGACTACTTAACTTTTTATCTGGGAATGACTTCGGATTTAGTCACAC
ATCGTCTCTTTGTCTGGCAATTGATTACCTATGCTTTTTTGCATTCGGTTCAGAACTTCTTTCACATTCTATTCAACATG
TTCTCTCTTTGGATGTTCGGTTCCATTCTGGAGAATTACTGGGGTGGTAGGAACTTTCTGAAATTCTATCTGTTCTCCTG
CTTTATGGGCGGCTTTTTTCCTTGGATTCTGCATAACGTCGGTTTTCATCAGGGGACCATCATAGGCGCCTCCGGTGGAA
TCTACGGTCTTTTGATCGCTTTCGCTTTGATTTGGCCGAACCAGGAACTTCTTTTTATGGGATTTTTTCCCCTTAAGGCA
AAGTATATGGTGGTGATCCTTATGCTTATCATCGCCCTTTCCGGTCCGGGTGGAAACATCGCTCACATGGCGCATTTGGG
CGGCGCTATCGGAGGCGGGCTCTATTTCTTTTATTACAATAAACTAAAGTCTAAAATTCCGGCCTTTCTTTCCCTCGGTC
GTTATCTCCAAAAAAGAAGGATGAGGAAATGGCAGGAAAAAATGAACCGTAAAATCCACGTTAGAGAAGAAGTGGATCAA
CTCCTGGACAAAATCTCGAAATCCGGGATAGACTCTCTTTCGAGAAAGGAAAGGAAATTCTTAAAGAATGCTTCCAATAA
GTATTATTCGGAAGATTAA

Upstream 100 bases:

>100_bases
CCAATCATTTCATCTTCGAAATATTCTGTCAAAGAGAAGAGAAAAAAGAAAATTCGTTTTACGGTTGTCTTCGGATTCCA
AAGAGAAATCATGTTCTACT

Downstream 100 bases:

>100_bases
GGATCAGATCTCGTTTTAGGAATTTATATGCGACCCTTGTAATGTTTCAGTCCCTAAAACTTAGAACTATCCGTTACAGA
TAACCTGCACATGCAACATT

Product: rhomboid family protein

Products: NA

Alternate protein names: Transmembrane Rhomboid Family Protein; Peptidase; Cytoplasmic Membrane Protein; Integral Membrane Protein; Rhomboid-Like Protein; Membrane Serine Protease; GlpG Protein; Serine Protease; Rhomboid Family Membrane Protein; Membrane Associated Serine Protease Rhomboid Family

Number of amino acids: Translated: 272; Mature: 271

Protein sequence:

>272_residues
MTGIYNRIGPELTPVVRTLLILNGGIFAVQLLLSWTIGDYLTFYLGMTSDLVTHRLFVWQLITYAFLHSVQNFFHILFNM
FSLWMFGSILENYWGGRNFLKFYLFSCFMGGFFPWILHNVGFHQGTIIGASGGIYGLLIAFALIWPNQELLFMGFFPLKA
KYMVVILMLIIALSGPGGNIAHMAHLGGAIGGGLYFFYYNKLKSKIPAFLSLGRYLQKRRMRKWQEKMNRKIHVREEVDQ
LLDKISKSGIDSLSRKERKFLKNASNKYYSED

Sequences:

>Translated_272_residues
MTGIYNRIGPELTPVVRTLLILNGGIFAVQLLLSWTIGDYLTFYLGMTSDLVTHRLFVWQLITYAFLHSVQNFFHILFNM
FSLWMFGSILENYWGGRNFLKFYLFSCFMGGFFPWILHNVGFHQGTIIGASGGIYGLLIAFALIWPNQELLFMGFFPLKA
KYMVVILMLIIALSGPGGNIAHMAHLGGAIGGGLYFFYYNKLKSKIPAFLSLGRYLQKRRMRKWQEKMNRKIHVREEVDQ
LLDKISKSGIDSLSRKERKFLKNASNKYYSED
>Mature_271_residues
TGIYNRIGPELTPVVRTLLILNGGIFAVQLLLSWTIGDYLTFYLGMTSDLVTHRLFVWQLITYAFLHSVQNFFHILFNMF
SLWMFGSILENYWGGRNFLKFYLFSCFMGGFFPWILHNVGFHQGTIIGASGGIYGLLIAFALIWPNQELLFMGFFPLKAK
YMVVILMLIIALSGPGGNIAHMAHLGGAIGGGLYFFYYNKLKSKIPAFLSLGRYLQKRRMRKWQEKMNRKIHVREEVDQL
LDKISKSGIDSLSRKERKFLKNASNKYYSED

Specific function: Unknown

COG id: COG0705

COG function: function code R; Uncharacterized membrane protein (homolog of Drosophila rhomboid)

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

Organism=Saccharomyces cerevisiae, GI6321538, Length=199, Percent_Identity=31.1557788944724, Blast_Score=70, Evalue=3e-13,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 31366; Mature: 31234

Theoretical pI: Translated: 10.27; Mature: 10.27

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.4 %Cys     (Translated Protein)
4.0 %Met     (Translated Protein)
4.4 %Cys+Met (Translated Protein)
0.4 %Cys     (Mature Protein)
3.7 %Met     (Mature Protein)
4.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure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HHHHHHHHCHHHHHHHHHHHHHHCCCCCCCCC
>Mature Secondary Structure 
TGIYNRIGPELTPVVRTLLILNGGIFAVQLLLSWTIGDYLTFYLGMTSDLVTHRLFVWQ
CCCCHHHCCHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
LITYAFLHSVQNFFHILFNMFSLWMFGSILENYWGGRNFLKFYLFSCFMGGFFPWILHNV
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHC
GFHQGTIIGASGGIYGLLIAFALIWPNQELLFMGFFPLKAKYMVVILMLIIALSGPGGNI
CCCCCEEEECCCCHHHHHHHHHHHCCCCCEEEEECHHHHHHHHHHHHHHHHHHCCCCCCH
AHMAHLGGAIGGGLYFFYYNKLKSKIPAFLSLGRYLQKRRMRKWQEKMNRKIHVREEVDQ
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEHHHHHHH
LLDKISKSGIDSLSRKERKFLKNASNKYYSED
HHHHHHHHCHHHHHHHHHHHHHHCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA