| Definition | Leptospira borgpetersenii serovar Hardjo-bovis L550 chromosome 1, complete sequence. |
|---|---|
| Accession | NC_008508 |
| Length | 3,614,446 |
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The map label for this gene is 116328690
Identifier: 116328690
GI number: 116328690
Start: 2417610
End: 2418047
Strand: Direct
Name: 116328690
Synonym: LBL_2062
Alternate gene names: NA
Gene position: 2417610-2418047 (Clockwise)
Preceding gene: 116328689
Following gene: 116328691
Centisome position: 66.89
GC content: 40.41
Gene sequence:
>438_bases ATGAAACTCAAATCTTTACTTTTCATTTCTTTCATGACGATCTGGGCGGTTCAGTGTACGGGCACGAATATTATGTATAT CTATGGTTTCCGTCCCAATACCAACCCAACCAAAGACTATACAATCGGAGCTATGGCCGCTAAAGGAGGAGGTTTGTTTC ACGACGCCGTAACCCCAGGCCAAATTGGAGACAACGCCGAAAAAGTGGTTACCGGAAGAGCTTGTTCTAAAAGTATTTTA TGGTTAGTATCTTTTGGTGATTCTTCCATCGAAGCCGCAAAAGCAGAAGCTAGAATTACAAAAGTTACAAGTATAGAATA CGAACAAACTGCAATTTTCACTACTCTCTTTCATAAATTCTGTACAGTTGTAACCGGTTCTAGCGAATCCGTAGAAACGA AAACGGATACAAAGTCTGCTGCCGGAAAGAAAAAATAA
Upstream 100 bases:
>100_bases ATATCATATTAATTAGTTTGGGCTTCGCAAAACGTTCCTTGAAGATCCACAGATTAAAGGAACGTTTGCGACAATCTAAA CTAGGAATTCAGGAGAAAAA
Downstream 100 bases:
>100_bases GGAAAGAATCAATATGAAAAAAATCATCATTCTGACTCTCATGATACTCGGGTTTTCGATATTTCTATCAAACTGCGCAA CCGGTCCCGTCCAAGGTCTT
Product: lipoprotein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 145; Mature: 145
Protein sequence:
>145_residues MKLKSLLFISFMTIWAVQCTGTNIMYIYGFRPNTNPTKDYTIGAMAAKGGGLFHDAVTPGQIGDNAEKVVTGRACSKSIL WLVSFGDSSIEAAKAEARITKVTSIEYEQTAIFTTLFHKFCTVVTGSSESVETKTDTKSAAGKKK
Sequences:
>Translated_145_residues MKLKSLLFISFMTIWAVQCTGTNIMYIYGFRPNTNPTKDYTIGAMAAKGGGLFHDAVTPGQIGDNAEKVVTGRACSKSIL WLVSFGDSSIEAAKAEARITKVTSIEYEQTAIFTTLFHKFCTVVTGSSESVETKTDTKSAAGKKK >Mature_145_residues MKLKSLLFISFMTIWAVQCTGTNIMYIYGFRPNTNPTKDYTIGAMAAKGGGLFHDAVTPGQIGDNAEKVVTGRACSKSIL WLVSFGDSSIEAAKAEARITKVTSIEYEQTAIFTTLFHKFCTVVTGSSESVETKTDTKSAAGKKK
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 15677; Mature: 15677
Theoretical pI: Translated: 9.48; Mature: 9.48
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.1 %Cys (Translated Protein) 2.8 %Met (Translated Protein) 4.8 %Cys+Met (Translated Protein) 2.1 %Cys (Mature Protein) 2.8 %Met (Mature Protein) 4.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKLKSLLFISFMTIWAVQCTGTNIMYIYGFRPNTNPTKDYTIGAMAAKGGGLFHDAVTPG CCHHHHHHHHHHHHHEEEECCCEEEEEEEECCCCCCCCCEEEEEEEECCCCEEECCCCCC QIGDNAEKVVTGRACSKSILWLVSFGDSSIEAAKAEARITKVTSIEYEQTAIFTTLFHKF CCCCCHHHEEECCCCCCEEEEEEEECCCCCHHHHHHHEEEEEEECCHHHHHHHHHHHHHH CTVVTGSSESVETKTDTKSAAGKKK HHEECCCCCCCCCCCCCCCCCCCCC >Mature Secondary Structure MKLKSLLFISFMTIWAVQCTGTNIMYIYGFRPNTNPTKDYTIGAMAAKGGGLFHDAVTPG CCHHHHHHHHHHHHHEEEECCCEEEEEEEECCCCCCCCCEEEEEEEECCCCEEECCCCCC QIGDNAEKVVTGRACSKSILWLVSFGDSSIEAAKAEARITKVTSIEYEQTAIFTTLFHKF CCCCCHHHEEECCCCCCEEEEEEEECCCCCHHHHHHHEEEEEEECCHHHHHHHHHHHHHH CTVVTGSSESVETKTDTKSAAGKKK HHEECCCCCCCCCCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA