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The map label for this gene is arnC [H]

Identifier: 116328659

GI number: 116328659

Start: 2366032

End: 2367174

Strand: Reverse

Name: arnC [H]

Synonym: LBL_2025

Alternate gene names: 116328659

Gene position: 2367174-2366032 (Counterclockwise)

Preceding gene: 116328660

Following gene: 116328658

Centisome position: 65.49

GC content: 39.81

Gene sequence:

>1143_bases
ATGCCTCAATTTTCCCTGATCTTACCTACTTATAATGAAAAGGAAAATTTGATCCTTCTTCTTCCTAAATTGATCGCTTT
GTTCAAATCGAAAAAAATAGATTATGAAATCATCATCGTCGACGATGATTCTCCCGATTTGACTTGGAAGTGGTTTCAAA
ATAAGGAAAAGGAATTTCCTTCCGTTCGATTAATTCGTAGAATCCATGAAAAAGGATTGAGCTCGGCGGTTCTCACCGGT
ATGGCTTCTTCACAAGGAGAATATTTGTGTGTAATGGATGCGGATCTTCAACACGATGAAAACATTCTTCCCGAAATGAT
CGTTCAGTTGTCCTCCTCCGATATCGTGATCGGATCACGTAGAGTGGAAAACGGTAATTATGGGGAAATGTCGCCGGTTC
GAAGGTTCATCAGTTATTCGGCCACATTACTCGCTAAGATACTCCTACCTCTTCCTACCACGGATCCTATGAGCGGTTTT
TTTGCGATACGCAGAGAAATTTTTGAAACTACAAAATCCAAAATCAATCCGAGAGGTTTTAAGATCCTTTTGGAATTCTT
GGGTAGAACTAAGGATTTGAAGGTCAGCGAAGTGGGATATTCTTTCCGGAAGAGAAATCACGGAGAAACGAAACTTTCCA
GTTCCGTAATACAACAATATTTGATCGCGTTATTCGAACTTAGGTTCGGTTCCTTTGTCTCGATCGAATTCATCAAGTAT
GGAATCACCGGCTTGTCGGGCGTTTTCGTAAATTTGGGGGGACAATTCTTATATAACAACGTTTTGGCGATCAATGTGGT
GGAGCAGATTCAATCCGCGATTTCTCTACCCTCCGGCGCCATCGTCTTCGGTTTCGAATTGAGCGTATTGACCAATTATC
TTTTGAACAACGTTTGGACCTTTTCCGATCGTAGGAATGTCGGCTTTTGGGACAATATGATCGGATTCTTAAAATTTAAT
GTAATCAGTCTTTTGGGTTTTTTGATTCAATTTTCAACCTGGTTTTTTCTGGTGAAATATTTTCAGATCCATTATCCTGA
TTTTTTACCCTATCGGCTTACGTATATGGGAAATATAGTCGGAATCCTGCTTGCAACCGCGACGAATTATTTTTTGAATC
GCAATTTTACATGGAAGACTTAA

Upstream 100 bases:

>100_bases
TCAGGCAAAATACCGTTTTTCGCACACAGAATCAAACGAACTATCCCGTTCAAATTTACAAGTTGACCGTCCGGCCCATA
ACATTTTTTTATTCGTCTAT

Downstream 100 bases:

>100_bases
TATATTTATGAAATTGTATCTGCTATTCTTGTTGAGTTGTTTGGTCTTATTTTTCGGAATTAAGACGGATTTTGAAGTAA
CCTACGGAGATTCCGGTTTT

Product: undP-glycosyltransferase

Products: NA

Alternate protein names: Undecaprenyl-phosphate Ara4FN transferase; Ara4FN transferase [H]

Number of amino acids: Translated: 380; Mature: 379

Protein sequence:

>380_residues
MPQFSLILPTYNEKENLILLLPKLIALFKSKKIDYEIIIVDDDSPDLTWKWFQNKEKEFPSVRLIRRIHEKGLSSAVLTG
MASSQGEYLCVMDADLQHDENILPEMIVQLSSSDIVIGSRRVENGNYGEMSPVRRFISYSATLLAKILLPLPTTDPMSGF
FAIRREIFETTKSKINPRGFKILLEFLGRTKDLKVSEVGYSFRKRNHGETKLSSSVIQQYLIALFELRFGSFVSIEFIKY
GITGLSGVFVNLGGQFLYNNVLAINVVEQIQSAISLPSGAIVFGFELSVLTNYLLNNVWTFSDRRNVGFWDNMIGFLKFN
VISLLGFLIQFSTWFFLVKYFQIHYPDFLPYRLTYMGNIVGILLATATNYFLNRNFTWKT

Sequences:

>Translated_380_residues
MPQFSLILPTYNEKENLILLLPKLIALFKSKKIDYEIIIVDDDSPDLTWKWFQNKEKEFPSVRLIRRIHEKGLSSAVLTG
MASSQGEYLCVMDADLQHDENILPEMIVQLSSSDIVIGSRRVENGNYGEMSPVRRFISYSATLLAKILLPLPTTDPMSGF
FAIRREIFETTKSKINPRGFKILLEFLGRTKDLKVSEVGYSFRKRNHGETKLSSSVIQQYLIALFELRFGSFVSIEFIKY
GITGLSGVFVNLGGQFLYNNVLAINVVEQIQSAISLPSGAIVFGFELSVLTNYLLNNVWTFSDRRNVGFWDNMIGFLKFN
VISLLGFLIQFSTWFFLVKYFQIHYPDFLPYRLTYMGNIVGILLATATNYFLNRNFTWKT
>Mature_379_residues
PQFSLILPTYNEKENLILLLPKLIALFKSKKIDYEIIIVDDDSPDLTWKWFQNKEKEFPSVRLIRRIHEKGLSSAVLTGM
ASSQGEYLCVMDADLQHDENILPEMIVQLSSSDIVIGSRRVENGNYGEMSPVRRFISYSATLLAKILLPLPTTDPMSGFF
AIRREIFETTKSKINPRGFKILLEFLGRTKDLKVSEVGYSFRKRNHGETKLSSSVIQQYLIALFELRFGSFVSIEFIKYG
ITGLSGVFVNLGGQFLYNNVLAINVVEQIQSAISLPSGAIVFGFELSVLTNYLLNNVWTFSDRRNVGFWDNMIGFLKFNV
ISLLGFLIQFSTWFFLVKYFQIHYPDFLPYRLTYMGNIVGILLATATNYFLNRNFTWKT

Specific function: Catalyzes the transfer of 4-deoxy-4-formamido-L- arabinose from UDP to undecaprenyl phosphate. The modified arabinose is attached to lipid A and is required for resistance to polymyxin and cationic antimicrobial peptides [H]

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cell inner membrane; Multi-pass membrane protein [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the glycosyltransferase 2 family [H]

Homologues:

Organism=Homo sapiens, GI4503363, Length=231, Percent_Identity=37.2294372294372, Blast_Score=134, Evalue=2e-31,
Organism=Caenorhabditis elegans, GI71999402, Length=234, Percent_Identity=35.042735042735, Blast_Score=118, Evalue=5e-27,
Organism=Saccharomyces cerevisiae, GI6325441, Length=252, Percent_Identity=37.6984126984127, Blast_Score=137, Evalue=2e-33,
Organism=Drosophila melanogaster, GI24585265, Length=231, Percent_Identity=29.004329004329, Blast_Score=112, Evalue=3e-25,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR022857
- InterPro:   IPR001173 [H]

Pfam domain/function: PF00535 Glycos_transf_2 [H]

EC number: =2.7.8.30 [H]

Molecular weight: Translated: 43610; Mature: 43479

Theoretical pI: Translated: 9.39; Mature: 9.39

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.3 %Cys     (Translated Protein)
2.1 %Met     (Translated Protein)
2.4 %Cys+Met (Translated Protein)
0.3 %Cys     (Mature Protein)
1.8 %Met     (Mature Protein)
2.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MPQFSLILPTYNEKENLILLLPKLIALFKSKKIDYEIIIVDDDSPDLTWKWFQNKEKEFP
CCCCEEEECCCCCCCCEEEEHHHHHHHHHCCCCCEEEEEEECCCCCCEEHHHCCCCCCCC
SVRLIRRIHEKGLSSAVLTGMASSQGEYLCVMDADLQHDENILPEMIVQLSSSDIVIGSR
HHHHHHHHHHHCCHHHHHHHCCCCCCCEEEEEECCCCCCCCHHHHHHHHHCCCCEEEECE
RVENGNYGEMSPVRRFISYSATLLAKILLPLPTTDPMSGFFAIRREIFETTKSKINPRGF
EECCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHCCCCHHH
KILLEFLGRTKDLKVSEVGYSFRKRNHGETKLSSSVIQQYLIALFELRFGSFVSIEFIKY
HHHHHHHCCCCCCCHHHHCHHHHHCCCCHHHHHHHHHHHHHHHHHHHHCCCEEEEHHHHH
GITGLSGVFVNLGGQFLYNNVLAINVVEQIQSAISLPSGAIVFGFELSVLTNYLLNNVWT
CCCHHHHHHHHCCCHHHHCCCCEEHHHHHHHHHHCCCCCCEEEEEEHHHHHHHHHHCEEE
FSDRRNVGFWDNMIGFLKFNVISLLGFLIQFSTWFFLVKYFQIHYPDFLPYRLTYMGNIV
CCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHH
GILLATATNYFLNRNFTWKT
HHHHHHHHHHHHCCCCCCCC
>Mature Secondary Structure 
PQFSLILPTYNEKENLILLLPKLIALFKSKKIDYEIIIVDDDSPDLTWKWFQNKEKEFP
CCCEEEECCCCCCCCEEEEHHHHHHHHHCCCCCEEEEEEECCCCCCEEHHHCCCCCCCC
SVRLIRRIHEKGLSSAVLTGMASSQGEYLCVMDADLQHDENILPEMIVQLSSSDIVIGSR
HHHHHHHHHHHCCHHHHHHHCCCCCCCEEEEEECCCCCCCCHHHHHHHHHCCCCEEEECE
RVENGNYGEMSPVRRFISYSATLLAKILLPLPTTDPMSGFFAIRREIFETTKSKINPRGF
EECCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHCCCCHHH
KILLEFLGRTKDLKVSEVGYSFRKRNHGETKLSSSVIQQYLIALFELRFGSFVSIEFIKY
HHHHHHHCCCCCCCHHHHCHHHHHCCCCHHHHHHHHHHHHHHHHHHHHCCCEEEEHHHHH
GITGLSGVFVNLGGQFLYNNVLAINVVEQIQSAISLPSGAIVFGFELSVLTNYLLNNVWT
CCCHHHHHHHHCCCHHHHCCCCEEHHHHHHHHHHCCCCCCEEEEEEHHHHHHHHHHCEEE
FSDRRNVGFWDNMIGFLKFNVISLLGFLIQFSTWFFLVKYFQIHYPDFLPYRLTYMGNIV
CCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHH
GILLATATNYFLNRNFTWKT
HHHHHHHHHHHHCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: NA