| Definition | Leptospira borgpetersenii serovar Hardjo-bovis L550 chromosome 1, complete sequence. |
|---|---|
| Accession | NC_008508 |
| Length | 3,614,446 |
Click here to switch to the map view.
The map label for this gene is 116328635
Identifier: 116328635
GI number: 116328635
Start: 2330867
End: 2331673
Strand: Reverse
Name: 116328635
Synonym: LBL_1998
Alternate gene names: NA
Gene position: 2331673-2330867 (Counterclockwise)
Preceding gene: 116328636
Following gene: 116328634
Centisome position: 64.51
GC content: 41.14
Gene sequence:
>807_bases GTGATTCAGAGAGAAATCGACGATAACAAAACCCGTGAAGAAAAGATAAAATTTTTAGAACAATATCTTCAGGATCATCC CGTATTCGAAGTCGTCGATTTATACAAATGGCTCTATTATGGAGAATTTGGCGAGGTTGAAAAACAGGAATTCTATTCGG AGGAGATCGAAGTCGTTCCCGAATTACAATCTATACTGAATGATCTGAAAGCGGAGGAAGGTAAACCCTATTCCGAGAGG GTTTGGGAACCGCTTGGATTTTCTCAAAGATATCTTCTTGTTTATCTTACTCCCTATGTAAAGCGCGATTATCCTCTCAA ACGATTGGTCAATTTGATGCAGAGATCCTCCGCATTTCAGGGATATCGAATGAGATTCAAATTGGATTGGATTATTCTCA AGGATATCATCACGGAAAAAATGCCCGTGTTCACAAAGCAGGAATTCAACGATTTTGAGGACCGGATCGGATTTCAACAA TTACCGGACGTGGAACTTTCAGATACTTATAGAAATGCGTACCCCGCGAGCTTTCGAGTCGTGTCCGCAAAATTATTCTA CGAATACTTTCCCGAGTTCGTAAAGGAGCCGCAGGGATTTTCTCTTTTGACGGAAATGGGCAGGGAACGAGAACCCGAGT TGGAATTATCCAAACAAGAAGATTCGTTTGTATCTGAAACGGAACAGGTAGTGCAGAAAAAACACGCACGGGAAACGAAA AAAAGAACCGAGAACCAAGGCTTCTCAACGGAAGATGAAGAATTGTACGAAGAAAATCTGGAGAATTTCAATTTTGACGG CTTGTAA
Upstream 100 bases:
>100_bases ATCTCCATTGGGATTATACTCACTCATAGGGAGAATATTTTTCGGATCTTAAATCGGTCCGAATTGTTCGCAGTCAAAAA CGAAGACGAGGAACGCAACG
Downstream 100 bases:
>100_bases GAAGTTTGAGAGTGTTTCCCGCCGGCTTTTGCTCTTGTCCGCAGATTCTGCTTTACAAGGTTCTAAATTTTATGTTAGGT TGAATAAAAAAGGAAATTCG
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 268; Mature: 268
Protein sequence:
>268_residues MIQREIDDNKTREEKIKFLEQYLQDHPVFEVVDLYKWLYYGEFGEVEKQEFYSEEIEVVPELQSILNDLKAEEGKPYSER VWEPLGFSQRYLLVYLTPYVKRDYPLKRLVNLMQRSSAFQGYRMRFKLDWIILKDIITEKMPVFTKQEFNDFEDRIGFQQ LPDVELSDTYRNAYPASFRVVSAKLFYEYFPEFVKEPQGFSLLTEMGREREPELELSKQEDSFVSETEQVVQKKHARETK KRTENQGFSTEDEELYEENLENFNFDGL
Sequences:
>Translated_268_residues MIQREIDDNKTREEKIKFLEQYLQDHPVFEVVDLYKWLYYGEFGEVEKQEFYSEEIEVVPELQSILNDLKAEEGKPYSER VWEPLGFSQRYLLVYLTPYVKRDYPLKRLVNLMQRSSAFQGYRMRFKLDWIILKDIITEKMPVFTKQEFNDFEDRIGFQQ LPDVELSDTYRNAYPASFRVVSAKLFYEYFPEFVKEPQGFSLLTEMGREREPELELSKQEDSFVSETEQVVQKKHARETK KRTENQGFSTEDEELYEENLENFNFDGL >Mature_268_residues MIQREIDDNKTREEKIKFLEQYLQDHPVFEVVDLYKWLYYGEFGEVEKQEFYSEEIEVVPELQSILNDLKAEEGKPYSER VWEPLGFSQRYLLVYLTPYVKRDYPLKRLVNLMQRSSAFQGYRMRFKLDWIILKDIITEKMPVFTKQEFNDFEDRIGFQQ LPDVELSDTYRNAYPASFRVVSAKLFYEYFPEFVKEPQGFSLLTEMGREREPELELSKQEDSFVSETEQVVQKKHARETK KRTENQGFSTEDEELYEENLENFNFDGL
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 32343; Mature: 32343
Theoretical pI: Translated: 4.40; Mature: 4.40
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 1.9 %Met (Translated Protein) 1.9 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 1.9 %Met (Mature Protein) 1.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MIQREIDDNKTREEKIKFLEQYLQDHPVFEVVDLYKWLYYGEFGEVEKQEFYSEEIEVVP CCCCCCCCCCHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHH ELQSILNDLKAEEGKPYSERVWEPLGFSQRYLLVYLTPYVKRDYPLKRLVNLMQRSSAFQ HHHHHHHHHHHCCCCCHHHHHCCCCCCCCCEEEEEECHHHHCCCCHHHHHHHHHHHHHHC GYRMRFKLDWIILKDIITEKMPVFTKQEFNDFEDRIGFQQLPDVELSDTYRNAYPASFRV CCEEEEEEHHHHHHHHHHHHCCCHHHHHHHHHHHHCCHHHCCCCCHHHHHHHCCCCHHHH VSAKLFYEYFPEFVKEPQGFSLLTEMGREREPELELSKQEDSFVSETEQVVQKKHARETK HHHHHHHHHHHHHHCCCCCHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHH KRTENQGFSTEDEELYEENLENFNFDGL HHHHCCCCCCCHHHHHHHHHHCCCCCCC >Mature Secondary Structure MIQREIDDNKTREEKIKFLEQYLQDHPVFEVVDLYKWLYYGEFGEVEKQEFYSEEIEVVP CCCCCCCCCCHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHH ELQSILNDLKAEEGKPYSERVWEPLGFSQRYLLVYLTPYVKRDYPLKRLVNLMQRSSAFQ HHHHHHHHHHHCCCCCHHHHHCCCCCCCCCEEEEEECHHHHCCCCHHHHHHHHHHHHHHC GYRMRFKLDWIILKDIITEKMPVFTKQEFNDFEDRIGFQQLPDVELSDTYRNAYPASFRV CCEEEEEEHHHHHHHHHHHHCCCHHHHHHHHHHHHCCHHHCCCCCHHHHHHHCCCCHHHH VSAKLFYEYFPEFVKEPQGFSLLTEMGREREPELELSKQEDSFVSETEQVVQKKHARETK HHHHHHHHHHHHHHCCCCCHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHH KRTENQGFSTEDEELYEENLENFNFDGL HHHHCCCCCCCHHHHHHHHHHCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA