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The map label for this gene is atpB [H]

Identifier: 116328619

GI number: 116328619

Start: 2309357

End: 2310466

Strand: Reverse

Name: atpB [H]

Synonym: LBL_1977

Alternate gene names: 116328619

Gene position: 2310466-2309357 (Counterclockwise)

Preceding gene: 116328620

Following gene: 116328618

Centisome position: 63.92

GC content: 44.77

Gene sequence:

>1110_bases
ATGTATCTAAACCAAACTTCTTTTATGACAAAAAAGTTCATCTTCTTTGCACTCTTAGTCGTATTTTTACCAATCCAAAT
ATTTGCATCGGAGCAATCTTCGGGCAAGGTTTTCGATTTGAACGAAGTTATCGTTCATCATTTGATGGACAGTGCCGAAT
TTCCGTTTAATATCGGTGGGGTAAAGGTTTTCGAAGGGGAAACGGATTTTGATTCCTCCGCCTCTTCGATCTTTACCGAT
CACGAAACCGGGAAGCGCTTTCACTATGTTGGCGGTTTCGACATGCACATTACGAAACGCGTCACAATGATGTGGATCGT
AGCTTTTTTTCTTTTTATTATCTTTATTCCTGCGGCGAGAATCATCGCAAAGAATCCTCTGAAAATTCAATCCCGTTTCG
CAAACACGGTTGAAGTGTTCGTCAACTTCTTACGCAAGGATATCGTAGACGAGAGTATGCACGGACACGGTCACGCTTAC
TATCATTACATTTTCACCTTGTTCTTCTTCATTCTATTCTGTAACTTGATGGGACTTGTTCCTTCTGTCGGAGAGTTACT
CGTAGTCGGAAAAGAATACGGAGCAATCGCGGCGACCAAAGTCGGTCTCGTCACTCCGGTTCCCGAGAAATTGATTGCGG
CTCACGCCGGACACGGATCTCACGAGGCTCCTTTTGTCGCGAAAATCTGGAGTGGGATCACGGTAACGGGAGATATTTCC
GTTACGATGACGCTTGCGCTTCTTACCATGTTCTTAATTTATACCGCGGGTTTTGTCTATCAAGGACCTAAGTTCATCTG
GCATTCCGTTCCGAACGGAGTTCCTCTGCCGCTTTACTTAATCATGTGGCCGCTTGAGTTCATCGTTTCTCCGATGGCAA
AAACATTCGCTCTTACGGTGCGTCTTTTGGCGAACATGACTGCGGGGCACGTGATCATTCTCGCGTTGATGGGTTTTATC
TTTCAGTTTCAATCTTGGGGAATCGTGCTGGTTTCGATCATCGGCTCGGGACTCATCTATGTCTTGGAAATTTTTGTGGC
GTTTCTCCAGGCATATATTTTCGTTTTGCTTACTTCCTTATTCGTAGGACTAAGCATGCATAGGCACTGA

Upstream 100 bases:

>100_bases
TCCGGAAACGTAATAAAATAAAAAGAAAACCGGGAGTATCCGCCGATTCTGTGCAGGTGGTTCGTATTTCGAGACGGTTC
CCTTTTTTTGATTCGAAAAA

Downstream 100 bases:

>100_bases
TTGTAGAGAATATTGAATCAACAAGGAGACAATTGAGCAATATGGAATTTGGATTAGGATATATTGGTGTAGGAATCGCT
GCGGGGGTCGCAATTCTCGG

Product: F0F1 ATP synthase subunit A

Products: ADP; phosphate; H+

Alternate protein names: ATP synthase F0 sector subunit a; F-ATPase subunit 6 [H]

Number of amino acids: Translated: 369; Mature: 369

Protein sequence:

>369_residues
MYLNQTSFMTKKFIFFALLVVFLPIQIFASEQSSGKVFDLNEVIVHHLMDSAEFPFNIGGVKVFEGETDFDSSASSIFTD
HETGKRFHYVGGFDMHITKRVTMMWIVAFFLFIIFIPAARIIAKNPLKIQSRFANTVEVFVNFLRKDIVDESMHGHGHAY
YHYIFTLFFFILFCNLMGLVPSVGELLVVGKEYGAIAATKVGLVTPVPEKLIAAHAGHGSHEAPFVAKIWSGITVTGDIS
VTMTLALLTMFLIYTAGFVYQGPKFIWHSVPNGVPLPLYLIMWPLEFIVSPMAKTFALTVRLLANMTAGHVIILALMGFI
FQFQSWGIVLVSIIGSGLIYVLEIFVAFLQAYIFVLLTSLFVGLSMHRH

Sequences:

>Translated_369_residues
MYLNQTSFMTKKFIFFALLVVFLPIQIFASEQSSGKVFDLNEVIVHHLMDSAEFPFNIGGVKVFEGETDFDSSASSIFTD
HETGKRFHYVGGFDMHITKRVTMMWIVAFFLFIIFIPAARIIAKNPLKIQSRFANTVEVFVNFLRKDIVDESMHGHGHAY
YHYIFTLFFFILFCNLMGLVPSVGELLVVGKEYGAIAATKVGLVTPVPEKLIAAHAGHGSHEAPFVAKIWSGITVTGDIS
VTMTLALLTMFLIYTAGFVYQGPKFIWHSVPNGVPLPLYLIMWPLEFIVSPMAKTFALTVRLLANMTAGHVIILALMGFI
FQFQSWGIVLVSIIGSGLIYVLEIFVAFLQAYIFVLLTSLFVGLSMHRH
>Mature_369_residues
MYLNQTSFMTKKFIFFALLVVFLPIQIFASEQSSGKVFDLNEVIVHHLMDSAEFPFNIGGVKVFEGETDFDSSASSIFTD
HETGKRFHYVGGFDMHITKRVTMMWIVAFFLFIIFIPAARIIAKNPLKIQSRFANTVEVFVNFLRKDIVDESMHGHGHAY
YHYIFTLFFFILFCNLMGLVPSVGELLVVGKEYGAIAATKVGLVTPVPEKLIAAHAGHGSHEAPFVAKIWSGITVTGDIS
VTMTLALLTMFLIYTAGFVYQGPKFIWHSVPNGVPLPLYLIMWPLEFIVSPMAKTFALTVRLLANMTAGHVIILALMGFI
FQFQSWGIVLVSIIGSGLIYVLEIFVAFLQAYIFVLLTSLFVGLSMHRH

Specific function: Key component of the proton channel; it plays a direct role in the translocation of protons across the membrane [H]

COG id: COG0356

COG function: function code C; F0F1-type ATP synthase, subunit a

Gene ontology:

Cell location: Cell inner membrane; Multi-pass membrane protein [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the ATPase A chain family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR000568
- InterPro:   IPR023011 [H]

Pfam domain/function: PF00119 ATP-synt_A [H]

EC number: 3.6.3.14

Molecular weight: Translated: 41349; Mature: 41349

Theoretical pI: Translated: 7.58; Mature: 7.58

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.3 %Cys     (Translated Protein)
4.1 %Met     (Translated Protein)
4.3 %Cys+Met (Translated Protein)
0.3 %Cys     (Mature Protein)
4.1 %Met     (Mature Protein)
4.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MYLNQTSFMTKKFIFFALLVVFLPIQIFASEQSSGKVFDLNEVIVHHLMDSAEFPFNIGG
CCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCEEEHHHHHHHHHHCCCCCCCCCCC
VKVFEGETDFDSSASSIFTDHETGKRFHYVGGFDMHITKRVTMMWIVAFFLFIIFIPAAR
EEEECCCCCCCCCHHHHCCCCCCCCEEEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHH
IIAKNPLKIQSRFANTVEVFVNFLRKDIVDESMHGHGHAYYHYIFTLFFFILFCNLMGLV
HHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHH
PSVGELLVVGKEYGAIAATKVGLVTPVPEKLIAAHAGHGSHEAPFVAKIWSGITVTGDIS
CCCCCEEEECCCCCCHHHHHCCCCCCCCHHHHHHHCCCCCCCCCHHHHHHCCEEEECCHH
VTMTLALLTMFLIYTAGFVYQGPKFIWHSVPNGVPLPLYLIMWPLEFIVSPMAKTFALTV
HHHHHHHHHHHHHHHHHHHCCCCHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHH
RLLANMTAGHVIILALMGFIFQFQSWGIVLVSIIGSGLIYVLEIFVAFLQAYIFVLLTSL
HHHHHCCCHHHHHHHHHHHHHHHHCCHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHH
FVGLSMHRH
HHHHHHCCC
>Mature Secondary Structure
MYLNQTSFMTKKFIFFALLVVFLPIQIFASEQSSGKVFDLNEVIVHHLMDSAEFPFNIGG
CCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCEEEHHHHHHHHHHCCCCCCCCCCC
VKVFEGETDFDSSASSIFTDHETGKRFHYVGGFDMHITKRVTMMWIVAFFLFIIFIPAAR
EEEECCCCCCCCCHHHHCCCCCCCCEEEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHH
IIAKNPLKIQSRFANTVEVFVNFLRKDIVDESMHGHGHAYYHYIFTLFFFILFCNLMGLV
HHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHH
PSVGELLVVGKEYGAIAATKVGLVTPVPEKLIAAHAGHGSHEAPFVAKIWSGITVTGDIS
CCCCCEEEECCCCCCHHHHHCCCCCCCCHHHHHHHCCCCCCCCCHHHHHHCCEEEECCHH
VTMTLALLTMFLIYTAGFVYQGPKFIWHSVPNGVPLPLYLIMWPLEFIVSPMAKTFALTV
HHHHHHHHHHHHHHHHHHHCCCCHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHH
RLLANMTAGHVIILALMGFIFQFQSWGIVLVSIIGSGLIYVLEIFVAFLQAYIFVLLTSL
HHHHHCCCHHHHHHHHHHHHHHHHCCHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHH
FVGLSMHRH
HHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: ATP; H2O; H+

Specific reaction: ATP + H2O + H+(in) = ADP + phosphate + H+(out)

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: NA