Click here to switch to the map view.

The map label for this gene is 116328609

Identifier: 116328609

GI number: 116328609

Start: 2298224

End: 2300455

Strand: Reverse

Name: 116328609

Synonym: LBL_1967

Alternate gene names: NA

Gene position: 2300455-2298224 (Counterclockwise)

Preceding gene: 116328610

Following gene: 116328608

Centisome position: 63.65

GC content: 41.98

Gene sequence:

>2232_bases
ATGGGATTGCTGGAACGGGTCGGTAAGTTAGTTCGATTGGATTCGTCCGGAGTGTCTTCTGCGAGCCAAGAAAAAAAATC
CTTGCTTAAAAAATCGGAATCCTTTCAGCGCAAACAGAGTTTTTTACAAAAGGCCCTTGGCATGAGAAAGGAAATCGAAA
AAAGGGAAACTTACTCTTCTACTTCGTCCCGATCGTCTACCGATCCTTTCGTTAAGTCGCAAGCTTTTTCGGAAGAATCC
GTAAACGATCCTCAATCTGATTTGCCCCGTTCCGAAGAATTTTCTCTTCCGGAATTGGGCGGAGATATACCCGAATCGGA
CGAGAAAAAAACTCAAAACGAATTTTCGGATTTCGACTTCGATTCTAGTACTTCCGAGAGTGAAGACTCATTTCCAGATC
TTTCGGAGGAATTTTCCGCTCCGGAAGAAACTCATACGGATGAAACTCCCATTGCTGAATTTGGGGGCTCGAATGAAGTT
GGTGATGACATTTCCTTCGACGATTTTTTTGAAGATACAAACTTTGAAGGGATTGAACATTCCGCAACTTTGGAGGAAGT
GGATTCGGAAAAAACACAAACAGTTCCGAACTTAGATGATAGTATAACGTCTATGGAAGAGGATCCGTTCGAAGATTGGG
TTAAGGAAGCGGAACGGGAAGCGCATCGAACTCCTTCTAAAAAAGATCCGAATGTCTCTACTTCCGAAAAGTCGGAATTT
TTATTCGACGACGATTCTAACTTCACCACATCCCCGATTGACCTGCAAATCGCTTCCCGAAAAAAATTGGAGAATTATAT
TTCCGTTTTCGAAATCAGCAAGGAAATCGGAGTTTCCACCGATTTTGCGAACTTTTTCGAAAATCTATTATTTTCCATTA
TGGGTCAGATTGGTTCCGAATCGATCGGCATCTTTTCCTCCAAAAACGGAAGTCAGGATTTTTTCCGTTTGGAAGATTAT
CAGGGGGAAAATTTCGATCAAGAATGGACTATCTCTTCGGAAGAAGAGATCTATCATGCGGTGCATAACGCGGGATCCGT
CCTTTATGCGAAAGAACTTCTCAAACCTAAACTTCCGGCCAAAGAGCGAGAGATCATTGAACGATCCGAAGCCGAACTTC
TCGTTCCGATCCGAACTGTGGATGAATTTTTCGGAATCATTTGTCTGAGTAAGACGATCAGTGGAGAGGACTACACGATC
GAGGATCTTGAATTTTTAAAGATCGTAGGGGAGATTGCCGGTTCCGTATACAAAAGAATCTGTGATACCGAATTACTTCA
TCAGGAAAATCAGATTTTAAAAGAGGCGGTCCGAGCCAACGAACTCATCATTTCACTCGCAAGAGATTTTGCTTCCGTAC
GTAGTATGGATGAGGCTTACGATAAATTATTTTCCGCCTTTCAAGAGGAGTTAAAAATTCGTCGTGCCACGTTTATGATT
TTGGACGGACATACTAAGAGCGAATTTCGCGTTTTTGCTTCCAATTTACTCACTCCCGAACATGTGGGAAGCTTCAGGTT
ACCTTTGGAAAGTTCGATCGTGGGAATCGTTTCCAACATTCCGGGAGTATTCCGGATTGAAAATTTTAGAAAACATCCCG
AGTTAGTACAGAAACTATCGAACGATGAACTTGGGCTCATGTCCGATTTTATAGTGATTCCTTTTATCAATTTGCATTGG
CTCGTGGGAATGTGGATTGTCCATGAAACGGAAGTTCCTTGGACTGATTCGGATCGCGAGACTGCAGTCGGAATCTCCGA
AGTGCTTGCCCCCGTATTTTCTAACTTATTACTTGTGCAGGAACGGGACTCGGTATTTAAAGATCCGTTCAGTCCTATCG
AAGAAAAAATCGATGAGATGATCCTCAAATCAGTTAGATTAAAAAGTTGTTTCAGTCTAACTATATTCAAAGTTCAGAAT
ATATTTAGAATGGTGAAATTAAAAGGATCCGGATTTTTCGTGAATTATAGCGAGGAATTGAGAAAGGCAATCCAGGACAA
TCTGTCCGAAGCCGATTTTCACTATCGGGTCGGACAGGGAAAATATGCCGTTGTTTTGGACGGAAAGGATAGGGAAGAAA
CCCAGATTCTTATACGTAAAATAAAAAATCGTCTCAGCGAGACGGATCGTAAGTCGAAAGACTTTCAGACTTCGGTCATT
CAACATACTCTTTGTTATCCGGCGGATACGAAAGAAAAGGAACGAATTCTCGAACTTCTCGAAGAATCTTAG

Upstream 100 bases:

>100_bases
ATTGCTCGGAAATCTACCCGACGATTTGATTCGGGAATTCTCTCGTTCCGATTATTTCGAACTTTATAAAAAACTAATGA
AGCAGATCGGTGTATAACCG

Downstream 100 bases:

>100_bases
ATCGATTGAATGTTATTCAATTCTCTGAATTTCCTTCTTTTTTTCATCGCTTTTTGTATGATCTACTTTCGTCTCGGATT
AACGGGACAGAATCGGCTTT

Product: GAF domain-containing protein

Products: NA

Alternate protein names: CGMP-Specific Phosphodiesterase

Number of amino acids: Translated: 743; Mature: 742

Protein sequence:

>743_residues
MGLLERVGKLVRLDSSGVSSASQEKKSLLKKSESFQRKQSFLQKALGMRKEIEKRETYSSTSSRSSTDPFVKSQAFSEES
VNDPQSDLPRSEEFSLPELGGDIPESDEKKTQNEFSDFDFDSSTSESEDSFPDLSEEFSAPEETHTDETPIAEFGGSNEV
GDDISFDDFFEDTNFEGIEHSATLEEVDSEKTQTVPNLDDSITSMEEDPFEDWVKEAEREAHRTPSKKDPNVSTSEKSEF
LFDDDSNFTTSPIDLQIASRKKLENYISVFEISKEIGVSTDFANFFENLLFSIMGQIGSESIGIFSSKNGSQDFFRLEDY
QGENFDQEWTISSEEEIYHAVHNAGSVLYAKELLKPKLPAKEREIIERSEAELLVPIRTVDEFFGIICLSKTISGEDYTI
EDLEFLKIVGEIAGSVYKRICDTELLHQENQILKEAVRANELIISLARDFASVRSMDEAYDKLFSAFQEELKIRRATFMI
LDGHTKSEFRVFASNLLTPEHVGSFRLPLESSIVGIVSNIPGVFRIENFRKHPELVQKLSNDELGLMSDFIVIPFINLHW
LVGMWIVHETEVPWTDSDRETAVGISEVLAPVFSNLLLVQERDSVFKDPFSPIEEKIDEMILKSVRLKSCFSLTIFKVQN
IFRMVKLKGSGFFVNYSEELRKAIQDNLSEADFHYRVGQGKYAVVLDGKDREETQILIRKIKNRLSETDRKSKDFQTSVI
QHTLCYPADTKEKERILELLEES

Sequences:

>Translated_743_residues
MGLLERVGKLVRLDSSGVSSASQEKKSLLKKSESFQRKQSFLQKALGMRKEIEKRETYSSTSSRSSTDPFVKSQAFSEES
VNDPQSDLPRSEEFSLPELGGDIPESDEKKTQNEFSDFDFDSSTSESEDSFPDLSEEFSAPEETHTDETPIAEFGGSNEV
GDDISFDDFFEDTNFEGIEHSATLEEVDSEKTQTVPNLDDSITSMEEDPFEDWVKEAEREAHRTPSKKDPNVSTSEKSEF
LFDDDSNFTTSPIDLQIASRKKLENYISVFEISKEIGVSTDFANFFENLLFSIMGQIGSESIGIFSSKNGSQDFFRLEDY
QGENFDQEWTISSEEEIYHAVHNAGSVLYAKELLKPKLPAKEREIIERSEAELLVPIRTVDEFFGIICLSKTISGEDYTI
EDLEFLKIVGEIAGSVYKRICDTELLHQENQILKEAVRANELIISLARDFASVRSMDEAYDKLFSAFQEELKIRRATFMI
LDGHTKSEFRVFASNLLTPEHVGSFRLPLESSIVGIVSNIPGVFRIENFRKHPELVQKLSNDELGLMSDFIVIPFINLHW
LVGMWIVHETEVPWTDSDRETAVGISEVLAPVFSNLLLVQERDSVFKDPFSPIEEKIDEMILKSVRLKSCFSLTIFKVQN
IFRMVKLKGSGFFVNYSEELRKAIQDNLSEADFHYRVGQGKYAVVLDGKDREETQILIRKIKNRLSETDRKSKDFQTSVI
QHTLCYPADTKEKERILELLEES
>Mature_742_residues
GLLERVGKLVRLDSSGVSSASQEKKSLLKKSESFQRKQSFLQKALGMRKEIEKRETYSSTSSRSSTDPFVKSQAFSEESV
NDPQSDLPRSEEFSLPELGGDIPESDEKKTQNEFSDFDFDSSTSESEDSFPDLSEEFSAPEETHTDETPIAEFGGSNEVG
DDISFDDFFEDTNFEGIEHSATLEEVDSEKTQTVPNLDDSITSMEEDPFEDWVKEAEREAHRTPSKKDPNVSTSEKSEFL
FDDDSNFTTSPIDLQIASRKKLENYISVFEISKEIGVSTDFANFFENLLFSIMGQIGSESIGIFSSKNGSQDFFRLEDYQ
GENFDQEWTISSEEEIYHAVHNAGSVLYAKELLKPKLPAKEREIIERSEAELLVPIRTVDEFFGIICLSKTISGEDYTIE
DLEFLKIVGEIAGSVYKRICDTELLHQENQILKEAVRANELIISLARDFASVRSMDEAYDKLFSAFQEELKIRRATFMIL
DGHTKSEFRVFASNLLTPEHVGSFRLPLESSIVGIVSNIPGVFRIENFRKHPELVQKLSNDELGLMSDFIVIPFINLHWL
VGMWIVHETEVPWTDSDRETAVGISEVLAPVFSNLLLVQERDSVFKDPFSPIEEKIDEMILKSVRLKSCFSLTIFKVQNI
FRMVKLKGSGFFVNYSEELRKAIQDNLSEADFHYRVGQGKYAVVLDGKDREETQILIRKIKNRLSETDRKSKDFQTSVIQ
HTLCYPADTKEKERILELLEES

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 84677; Mature: 84546

Theoretical pI: Translated: 4.36; Mature: 4.36

Prosite motif: PS00107 PROTEIN_KINASE_ATP ; PS50887 GGDEF

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.5 %Cys     (Translated Protein)
1.3 %Met     (Translated Protein)
1.9 %Cys+Met (Translated Protein)
0.5 %Cys     (Mature Protein)
1.2 %Met     (Mature Protein)
1.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MGLLERVGKLVRLDSSGVSSASQEKKSLLKKSESFQRKQSFLQKALGMRKEIEKRETYSS
CCHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC
TSSRSSTDPFVKSQAFSEESVNDPQSDLPRSEEFSLPELGGDIPESDEKKTQNEFSDFDF
CCCCCCCCCHHHHHHCCCCCCCCCHHHCCCCCCCCCHHCCCCCCCCCHHHHHHHCCCCCC
DSSTSESEDSFPDLSEEFSAPEETHTDETPIAEFGGSNEVGDDISFDDFFEDTNFEGIEH
CCCCCCCCCCCCCCHHHHCCCCCCCCCCCCHHHCCCCCCCCCCCCHHHHHCCCCCCCCCC
SATLEEVDSEKTQTVPNLDDSITSMEEDPFEDWVKEAEREAHRTPSKKDPNVSTSEKSEF
HHHHHHHCCHHHHCCCCCCHHHHHCCCCHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCE
LFDDDSNFTTSPIDLQIASRKKLENYISVFEISKEIGVSTDFANFFENLLFSIMGQIGSE
EECCCCCCCCCCCEEEEHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHCCC
SIGIFSSKNGSQDFFRLEDYQGENFDQEWTISSEEEIYHAVHNAGSVLYAKELLKPKLPA
CCCEEECCCCCCCCEEECCCCCCCCCCCCCCCCHHHHHHHHHHCCHHHHHHHHHCCCCCC
KEREIIERSEAELLVPIRTVDEFFGIICLSKTISGEDYTIEDLEFLKIVGEIAGSVYKRI
HHHHHHHHCCCCEEEHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHH
CDTELLHQENQILKEAVRANELIISLARDFASVRSMDEAYDKLFSAFQEELKIRRATFMI
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEEEE
LDGHTKSEFRVFASNLLTPEHVGSFRLPLESSIVGIVSNIPGVFRIENFRKHPELVQKLS
EECCCHHHHHHHHHHCCCHHHCCCCCCCHHHHHHHHHHCCCCCEEEHHHHCCHHHHHHHC
NDELGLMSDFIVIPFINLHWLVGMWIVHETEVPWTDSDRETAVGISEVLAPVFSNLLLVQ
CCCCHHHHHHHHHHHHHHHHHHHHHHEEECCCCCCCCCCHHHHHHHHHHHHHHHHHEEHH
ERDSVFKDPFSPIEEKIDEMILKSVRLKSCFSLTIFKVQNIFRMVKLKGSGFFVNYSEEL
CCHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEECHHHH
RKAIQDNLSEADFHYRVGQGKYAVVLDGKDREETQILIRKIKNRLSETDRKSKDFQTSVI
HHHHHHCCCCCCCEEEECCCCEEEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
QHTLCYPADTKEKERILELLEES
HHHHCCCCCCHHHHHHHHHHHCC
>Mature Secondary Structure 
GLLERVGKLVRLDSSGVSSASQEKKSLLKKSESFQRKQSFLQKALGMRKEIEKRETYSS
CHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC
TSSRSSTDPFVKSQAFSEESVNDPQSDLPRSEEFSLPELGGDIPESDEKKTQNEFSDFDF
CCCCCCCCCHHHHHHCCCCCCCCCHHHCCCCCCCCCHHCCCCCCCCCHHHHHHHCCCCCC
DSSTSESEDSFPDLSEEFSAPEETHTDETPIAEFGGSNEVGDDISFDDFFEDTNFEGIEH
CCCCCCCCCCCCCCHHHHCCCCCCCCCCCCHHHCCCCCCCCCCCCHHHHHCCCCCCCCCC
SATLEEVDSEKTQTVPNLDDSITSMEEDPFEDWVKEAEREAHRTPSKKDPNVSTSEKSEF
HHHHHHHCCHHHHCCCCCCHHHHHCCCCHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCE
LFDDDSNFTTSPIDLQIASRKKLENYISVFEISKEIGVSTDFANFFENLLFSIMGQIGSE
EECCCCCCCCCCCEEEEHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHCCC
SIGIFSSKNGSQDFFRLEDYQGENFDQEWTISSEEEIYHAVHNAGSVLYAKELLKPKLPA
CCCEEECCCCCCCCEEECCCCCCCCCCCCCCCCHHHHHHHHHHCCHHHHHHHHHCCCCCC
KEREIIERSEAELLVPIRTVDEFFGIICLSKTISGEDYTIEDLEFLKIVGEIAGSVYKRI
HHHHHHHHCCCCEEEHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHH
CDTELLHQENQILKEAVRANELIISLARDFASVRSMDEAYDKLFSAFQEELKIRRATFMI
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEEEE
LDGHTKSEFRVFASNLLTPEHVGSFRLPLESSIVGIVSNIPGVFRIENFRKHPELVQKLS
EECCCHHHHHHHHHHCCCHHHCCCCCCCHHHHHHHHHHCCCCCEEEHHHHCCHHHHHHHC
NDELGLMSDFIVIPFINLHWLVGMWIVHETEVPWTDSDRETAVGISEVLAPVFSNLLLVQ
CCCCHHHHHHHHHHHHHHHHHHHHHHEEECCCCCCCCCCHHHHHHHHHHHHHHHHHEEHH
ERDSVFKDPFSPIEEKIDEMILKSVRLKSCFSLTIFKVQNIFRMVKLKGSGFFVNYSEEL
CCHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEECHHHH
RKAIQDNLSEADFHYRVGQGKYAVVLDGKDREETQILIRKIKNRLSETDRKSKDFQTSVI
HHHHHHCCCCCCCEEEECCCCEEEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
QHTLCYPADTKEKERILELLEES
HHHHCCCCCCHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA