| Definition | Leptospira borgpetersenii serovar Hardjo-bovis L550 chromosome 1, complete sequence. |
|---|---|
| Accession | NC_008508 |
| Length | 3,614,446 |
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The map label for this gene is 116328589
Identifier: 116328589
GI number: 116328589
Start: 2269169
End: 2270317
Strand: Reverse
Name: 116328589
Synonym: LBL_1946
Alternate gene names: NA
Gene position: 2270317-2269169 (Counterclockwise)
Preceding gene: 116328590
Following gene: 116328588
Centisome position: 62.81
GC content: 39.86
Gene sequence:
>1149_bases ATGTCTTTTTTTTCCGATTCAAGAAAAGCTCCTTTCAGAAAAAGGAAGCTTTTTTCCAATTCGCTTCTAATCGGATTTTT GATAGCCATATTTTTCGTTTTGTTTTTGGGAAATTTGGAAACTTCGGTCGCAAAAGTCGTTCTTTCCGCTCTGGAAGGAG GTTTAATCGGAGGACTCTGTGATTGGTTTGCCGTATGGAAAACTTACAAAGCGATCGAAGAAGACAGTTCCAAGCTAGCC TCTGAAATCGGAAACTGGGTGGCGGACGATCTTTTACATCACGAAGTCATTCGGTCCAGAATAAAAATGGTTTTAGAGGA TCCTTCAACTCGAGGCGAGGTTCATGAGGTTTTACTGGAGACTTTCGGAAACGAAGAAAAAACAAACGAGGTATTAAACC GGCTTTTCTCTAAGGTAGAAGAGGAAATCGTTCAATACGTCGTTCATTATCAGTTTTCGGGGACCGATGTCGAAATATTG AAAGAATTAAACCGACAAAAGGAGATCATAGACACGATTAAACTTCTGATAGGAGAATCCATGATCAAAGTCGCCGATAC CGAGGAATTCAAATCCCTTCTTAAAGAAATATTAGGTAAAATGAATTTGGTGGCCCAGGTCGTTTTAAGCCTAATTGTCG ATTTCCCGAAAAAGTTGAAGGAATATGGAAATCACGTCAAACAAGGATTGATAATCGAATCCAAAGACGAAAAAACCATT GAGAAATTGGTCAATCTTATGGCGGCTTCTGCGGAAACATATATTTCGTCTTGGAACGAATTGCATCTGGATCAGAGAGA GAAGGCGGTAAGATCCTTGATGGGATTCTTAAAGGACCAGGCTAGTCGGCTTCTGGGAACACTCGTCCAAAAACATCTTC GAGAAATCGGAGAGATGAAAACTTTACAGGAATACGCTCCTCTCCGCTCTATTTTTGAGTTTGTGGAAAAACGTATCGAC GAAGGAGTTTCCGGTTATATCGGAAAACAGATCACTAGCAGGCTGCAGAGTTTGAATCCTAAAGATCTGAGAAAAAATTT GGAATGGAAAACCCGAAATGTCTTAGAAACAATTCGAATAAATGGAAGTATTTTGGGATTCTTTTTAGGAAGTGTCACCG GACTCGTAAAATCCTTTTTTTGGAATTGA
Upstream 100 bases:
>100_bases TTTATGATATTCGCACATATTTGATTACTCTAATTCAATTTTTGCTTCCGCTTTCTTTTTTGGGAGCGACGTTTTTAACG TATAGGAAAATATCCAATTG
Downstream 100 bases:
>100_bases AATTCCAAACGTTATAGAAAACTGAGCATGCAGCAGAAGAATACTCGTATTATGAAGCGCCGTTTGAAATAAATTGTATA CAAATGCTATAATCAATAGA
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 382; Mature: 381
Protein sequence:
>382_residues MSFFSDSRKAPFRKRKLFSNSLLIGFLIAIFFVLFLGNLETSVAKVVLSALEGGLIGGLCDWFAVWKTYKAIEEDSSKLA SEIGNWVADDLLHHEVIRSRIKMVLEDPSTRGEVHEVLLETFGNEEKTNEVLNRLFSKVEEEIVQYVVHYQFSGTDVEIL KELNRQKEIIDTIKLLIGESMIKVADTEEFKSLLKEILGKMNLVAQVVLSLIVDFPKKLKEYGNHVKQGLIIESKDEKTI EKLVNLMAASAETYISSWNELHLDQREKAVRSLMGFLKDQASRLLGTLVQKHLREIGEMKTLQEYAPLRSIFEFVEKRID EGVSGYIGKQITSRLQSLNPKDLRKNLEWKTRNVLETIRINGSILGFFLGSVTGLVKSFFWN
Sequences:
>Translated_382_residues MSFFSDSRKAPFRKRKLFSNSLLIGFLIAIFFVLFLGNLETSVAKVVLSALEGGLIGGLCDWFAVWKTYKAIEEDSSKLA SEIGNWVADDLLHHEVIRSRIKMVLEDPSTRGEVHEVLLETFGNEEKTNEVLNRLFSKVEEEIVQYVVHYQFSGTDVEIL KELNRQKEIIDTIKLLIGESMIKVADTEEFKSLLKEILGKMNLVAQVVLSLIVDFPKKLKEYGNHVKQGLIIESKDEKTI EKLVNLMAASAETYISSWNELHLDQREKAVRSLMGFLKDQASRLLGTLVQKHLREIGEMKTLQEYAPLRSIFEFVEKRID EGVSGYIGKQITSRLQSLNPKDLRKNLEWKTRNVLETIRINGSILGFFLGSVTGLVKSFFWN >Mature_381_residues SFFSDSRKAPFRKRKLFSNSLLIGFLIAIFFVLFLGNLETSVAKVVLSALEGGLIGGLCDWFAVWKTYKAIEEDSSKLAS EIGNWVADDLLHHEVIRSRIKMVLEDPSTRGEVHEVLLETFGNEEKTNEVLNRLFSKVEEEIVQYVVHYQFSGTDVEILK ELNRQKEIIDTIKLLIGESMIKVADTEEFKSLLKEILGKMNLVAQVVLSLIVDFPKKLKEYGNHVKQGLIIESKDEKTIE KLVNLMAASAETYISSWNELHLDQREKAVRSLMGFLKDQASRLLGTLVQKHLREIGEMKTLQEYAPLRSIFEFVEKRIDE GVSGYIGKQITSRLQSLNPKDLRKNLEWKTRNVLETIRINGSILGFFLGSVTGLVKSFFWN
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 43636; Mature: 43505
Theoretical pI: Translated: 7.24; Mature: 7.24
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.3 %Cys (Translated Protein) 1.8 %Met (Translated Protein) 2.1 %Cys+Met (Translated Protein) 0.3 %Cys (Mature Protein) 1.6 %Met (Mature Protein) 1.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSFFSDSRKAPFRKRKLFSNSLLIGFLIAIFFVLFLGNLETSVAKVVLSALEGGLIGGLC CCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHCCHHHHHH DWFAVWKTYKAIEEDSSKLASEIGNWVADDLLHHEVIRSRIKMVLEDPSTRGEVHEVLLE HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHH TFGNEEKTNEVLNRLFSKVEEEIVQYVVHYQFSGTDVEILKELNRQKEIIDTIKLLIGES HHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHH MIKVADTEEFKSLLKEILGKMNLVAQVVLSLIVDFPKKLKEYGNHVKQGLIIESKDEKTI HHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCEECCCCHHHH EKLVNLMAASAETYISSWNELHLDQREKAVRSLMGFLKDQASRLLGTLVQKHLREIGEMK HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH TLQEYAPLRSIFEFVEKRIDEGVSGYIGKQITSRLQSLNPKDLRKNLEWKTRNVLETIRI HHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHCCCHHHHHHCCCHHHHHHHHHHHH NGSILGFFLGSVTGLVKSFFWN CHHHHHHHHHHHHHHHHHHHCC >Mature Secondary Structure SFFSDSRKAPFRKRKLFSNSLLIGFLIAIFFVLFLGNLETSVAKVVLSALEGGLIGGLC CCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHCCHHHHHH DWFAVWKTYKAIEEDSSKLASEIGNWVADDLLHHEVIRSRIKMVLEDPSTRGEVHEVLLE HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHH TFGNEEKTNEVLNRLFSKVEEEIVQYVVHYQFSGTDVEILKELNRQKEIIDTIKLLIGES HHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHH MIKVADTEEFKSLLKEILGKMNLVAQVVLSLIVDFPKKLKEYGNHVKQGLIIESKDEKTI HHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCEECCCCHHHH EKLVNLMAASAETYISSWNELHLDQREKAVRSLMGFLKDQASRLLGTLVQKHLREIGEMK HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH TLQEYAPLRSIFEFVEKRIDEGVSGYIGKQITSRLQSLNPKDLRKNLEWKTRNVLETIRI HHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHCCCHHHHHHCCCHHHHHHHHHHHH NGSILGFFLGSVTGLVKSFFWN CHHHHHHHHHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA