Click here to switch to the map view.

The map label for this gene is yhcV [H]

Identifier: 116328556

GI number: 116328556

Start: 2233979

End: 2234419

Strand: Direct

Name: yhcV [H]

Synonym: LBL_1913

Alternate gene names: 116328556

Gene position: 2233979-2234419 (Clockwise)

Preceding gene: 116328554

Following gene: 116328557

Centisome position: 61.81

GC content: 42.63

Gene sequence:

>441_bases
ATGTACATAAAACAAATCCTGGCAAAAAAAGATCGAAAACTTCTGTCGGTGGAACCGGAAACCTCGGTGATGGATGCGGT
CAAATTTATGACCAAATACGATATCGGATCGGTGATAATCCTAACGGAAGGAAAGCTCAAAGGAATTTTTACGGAGAGGG
ACGTCCTTCATCTTTCAGCCGAGCTGGGATTGGACTTCTTTAAAAAATCGGTTTCGGAAGTGATGTCCACATCTCTCACT
ACAATGACTCCGGAAGACGACGTGGATGAGCTACTTTCCATCATGCTCAAAAAAAGGATTCGTCACATGCCTATTTTAGA
AGACGGACTTTTGGTCGGAATCGTCTCGATAGGAGATGCAGTCAAAGCGAAGATTGAAAAAACGGAGGAAGAAAACAAAA
ACCTCAAACAATACATGTACAGCGAGAACGGATTCATCTAG

Upstream 100 bases:

>100_bases
GCGAATATCCTGGACATTCTAAGAACTTGAATTACATTGTGTCATATCTCTTTAAGGAACACGTCGGTAACGTGGAATAA
CAATCAAAACGGAGGCGGTA

Downstream 100 bases:

>100_bases
AGCCAATGATCAAAAACTATATCTCTTCCAAACGATTATCGATCATCGAAGTTTAAAACATTAAAAAATTCTAAAGAATC
AATATCTCTCGATCCAACTG

Product: signal transduction protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 146; Mature: 146

Protein sequence:

>146_residues
MYIKQILAKKDRKLLSVEPETSVMDAVKFMTKYDIGSVIILTEGKLKGIFTERDVLHLSAELGLDFFKKSVSEVMSTSLT
TMTPEDDVDELLSIMLKKRIRHMPILEDGLLVGIVSIGDAVKAKIEKTEEENKNLKQYMYSENGFI

Sequences:

>Translated_146_residues
MYIKQILAKKDRKLLSVEPETSVMDAVKFMTKYDIGSVIILTEGKLKGIFTERDVLHLSAELGLDFFKKSVSEVMSTSLT
TMTPEDDVDELLSIMLKKRIRHMPILEDGLLVGIVSIGDAVKAKIEKTEEENKNLKQYMYSENGFI
>Mature_146_residues
MYIKQILAKKDRKLLSVEPETSVMDAVKFMTKYDIGSVIILTEGKLKGIFTERDVLHLSAELGLDFFKKSVSEVMSTSLT
TMTPEDDVDELLSIMLKKRIRHMPILEDGLLVGIVSIGDAVKAKIEKTEEENKNLKQYMYSENGFI

Specific function: Not Known. [C]

COG id: COG0517

COG function: function code R; FOG: CBS domain

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 2 CBS domains [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR013785
- InterPro:   IPR000644 [H]

Pfam domain/function: PF00571 CBS [H]

EC number: NA

Molecular weight: Translated: 16548; Mature: 16548

Theoretical pI: Translated: 5.34; Mature: 5.34

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
5.5 %Met     (Translated Protein)
5.5 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
5.5 %Met     (Mature Protein)
5.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MYIKQILAKKDRKLLSVEPETSVMDAVKFMTKYDIGSVIILTEGKLKGIFTERDVLHLSA
CCHHHHHHHHCCCEEEECCCHHHHHHHHHHHHHCCCEEEEEECCCCCCEECCHHHHHHHH
ELGLDFFKKSVSEVMSTSLTTMTPEDDVDELLSIMLKKRIRHMPILEDGLLVGIVSIGDA
HHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHCCCCCCCCCEEHHHHHCHH
VKAKIEKTEEENKNLKQYMYSENGFI
HHHHHHHHHHHHHHHHHHHHHCCCCC
>Mature Secondary Structure
MYIKQILAKKDRKLLSVEPETSVMDAVKFMTKYDIGSVIILTEGKLKGIFTERDVLHLSA
CCHHHHHHHHCCCEEEECCCHHHHHHHHHHHHHCCCEEEEEECCCCCCEECCHHHHHHHH
ELGLDFFKKSVSEVMSTSLTTMTPEDDVDELLSIMLKKRIRHMPILEDGLLVGIVSIGDA
HHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHCCCCCCCCCEEHHHHHCHH
VKAKIEKTEEENKNLKQYMYSENGFI
HHHHHHHHHHHHHHHHHHHHHCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 8969498; 9384377 [H]