| Definition | Leptospira borgpetersenii serovar Hardjo-bovis L550 chromosome 1, complete sequence. |
|---|---|
| Accession | NC_008508 |
| Length | 3,614,446 |
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The map label for this gene is flgG-2 [H]
Identifier: 116328474
GI number: 116328474
Start: 2118128
End: 2118991
Strand: Direct
Name: flgG-2 [H]
Synonym: LBL_1819
Alternate gene names: 116328474
Gene position: 2118128-2118991 (Clockwise)
Preceding gene: 116328473
Following gene: 116328476
Centisome position: 58.6
GC content: 46.18
Gene sequence:
>864_bases ATGCTCAGAGGAATGTATACAGGCGCAAACGGGATGATCATCCAGCAAACTCGGATGGATGTGATTTCCAACAATCTTGC AAACGTGGATAAGACCGCGTTTAAAAGAGACACCACCGTTTTTAAAACATTCCCCGAGCTCCTTCTCCATCGTTTCGACG AAGACGGAGTCGGTAAAGTGCCGATGGGTTCTTTCGATACGGCACCCGTTGTCGGCAAACTCGGATTAGGCGGTGAAGTC AACGAAGTCTATACACGTTTTGAACAAGGCGCGGTTAAAAAAACCGAAAATCCGTTTGATATCATGCTCCAAGACAGACC CGGTAACGAACATCCCGCTTTCTTCAGCGTTATGACGAACCGCGGCGAAAGACTTTCCAGAAGCGGCGCCTTCGTTATGG ATACGAACGGCTATCTTGTCACTCCGCAAGGATTTCCTCTGATGGGCGAAAACGGCCCGATCCGCGTGGCAAGAGGCAAT TTTTTGATTAAGGAAAACGGCGAAGTTTGGATCAACGGTGAAATCGGAAACGATCCTAGAAACGGAACCTCTCTGGATAA AAATCGATTTGAAACTCCGGTTCTTTTGGATCGTCTGAAAATTCGCACCGTTGAAAATCCACGGCATCTCGATAAAGAAG GTGATTCCTTTTATGCGGATACCCCCGAGTCCGGAGAACCGACGCCTTTCGAACTCAAAGACGAGCCTTCTATTTTACAA GGTTATCTCGAAGCGTCTAACGTTAGCGTCGTTACCGAAATGGTAGAAATGATCGAAGTCAACCGCTCTTATGAAGCGAA CCAAAAGACTGTTCAAACACAGGATTCATTATTAGGTAAATTAATAAACGAAGTTCTAAGATAG
Upstream 100 bases:
>100_bases AAAATAGAAAAGTTCTCTATCCTTTTCCAATTTATGTCCTCAAAATCGTTATGGAATTTCGGAAATTCTCCGATCTTAAA AACGGACCAGGAGAAAAAAT
Downstream 100 bases:
>100_bases CAATCCCTTCGCGCCAATCCCAACCGCTGGCCTTGACGGGCCCTCGGTCTCGGCACGAAAAGATCCCCACCTCATCCCTC GTTGAACACCATCCTTCCCC
Product: endoflagellar distal basal body rod protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 287; Mature: 287
Protein sequence:
>287_residues MLRGMYTGANGMIIQQTRMDVISNNLANVDKTAFKRDTTVFKTFPELLLHRFDEDGVGKVPMGSFDTAPVVGKLGLGGEV NEVYTRFEQGAVKKTENPFDIMLQDRPGNEHPAFFSVMTNRGERLSRSGAFVMDTNGYLVTPQGFPLMGENGPIRVARGN FLIKENGEVWINGEIGNDPRNGTSLDKNRFETPVLLDRLKIRTVENPRHLDKEGDSFYADTPESGEPTPFELKDEPSILQ GYLEASNVSVVTEMVEMIEVNRSYEANQKTVQTQDSLLGKLINEVLR
Sequences:
>Translated_287_residues MLRGMYTGANGMIIQQTRMDVISNNLANVDKTAFKRDTTVFKTFPELLLHRFDEDGVGKVPMGSFDTAPVVGKLGLGGEV NEVYTRFEQGAVKKTENPFDIMLQDRPGNEHPAFFSVMTNRGERLSRSGAFVMDTNGYLVTPQGFPLMGENGPIRVARGN FLIKENGEVWINGEIGNDPRNGTSLDKNRFETPVLLDRLKIRTVENPRHLDKEGDSFYADTPESGEPTPFELKDEPSILQ GYLEASNVSVVTEMVEMIEVNRSYEANQKTVQTQDSLLGKLINEVLR >Mature_287_residues MLRGMYTGANGMIIQQTRMDVISNNLANVDKTAFKRDTTVFKTFPELLLHRFDEDGVGKVPMGSFDTAPVVGKLGLGGEV NEVYTRFEQGAVKKTENPFDIMLQDRPGNEHPAFFSVMTNRGERLSRSGAFVMDTNGYLVTPQGFPLMGENGPIRVARGN FLIKENGEVWINGEIGNDPRNGTSLDKNRFETPVLLDRLKIRTVENPRHLDKEGDSFYADTPESGEPTPFELKDEPSILQ GYLEASNVSVVTEMVEMIEVNRSYEANQKTVQTQDSLLGKLINEVLR
Specific function: Not required for motility [H]
COG id: COG4786
COG function: function code N; Flagellar basal body rod protein
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the flagella basal body rod proteins family [H]
Homologues:
Organism=Escherichia coli, GI1787318, Length=288, Percent_Identity=33.3333333333333, Blast_Score=115, Evalue=3e-27,
Paralogues:
None
Copy number: 10-20 (rich media) [C]
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR010930 - InterPro: IPR001444 - InterPro: IPR019776 - InterPro: IPR020013 [H]
Pfam domain/function: PF06429 DUF1078; PF00460 Flg_bb_rod [H]
EC number: NA
Molecular weight: Translated: 32069; Mature: 32069
Theoretical pI: Translated: 4.73; Mature: 4.73
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 3.8 %Met (Translated Protein) 3.8 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 3.8 %Met (Mature Protein) 3.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MLRGMYTGANGMIIQQTRMDVISNNLANVDKTAFKRDTTVFKTFPELLLHRFDEDGVGKV CCCCEEECCCCEEEEHHHHHHHHCCCCCCHHHHHHCCCHHHHHHHHHHHHHCCCCCCCCC PMGSFDTAPVVGKLGLGGEVNEVYTRFEQGAVKKTENPFDIMLQDRPGNEHPAFFSVMTN CCCCCCCCCCEECCCCCCCHHHHHHHHHHCCCCCCCCCEEEEEECCCCCCCCEEEEEECC RGERLSRSGAFVMDTNGYLVTPQGFPLMGENGPIRVARGNFLIKENGEVWINGEIGNDPR CCHHHHCCCCEEEECCCEEECCCCCEEECCCCCEEEECCCEEEEECCCEEEECCCCCCCC NGTSLDKNRFETPVLLDRLKIRTVENPRHLDKEGDSFYADTPESGEPTPFELKDEPSILQ CCCCCCHHCCCCHHHHHHHHEEECCCCCCCCCCCCCEECCCCCCCCCCCCCCCCCHHHHH GYLEASNVSVVTEMVEMIEVNRSYEANQKTVQTQDSLLGKLINEVLR HHHHHCCHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHC >Mature Secondary Structure MLRGMYTGANGMIIQQTRMDVISNNLANVDKTAFKRDTTVFKTFPELLLHRFDEDGVGKV CCCCEEECCCCEEEEHHHHHHHHCCCCCCHHHHHHCCCHHHHHHHHHHHHHCCCCCCCCC PMGSFDTAPVVGKLGLGGEVNEVYTRFEQGAVKKTENPFDIMLQDRPGNEHPAFFSVMTN CCCCCCCCCCEECCCCCCCHHHHHHHHHHCCCCCCCCCEEEEEECCCCCCCCEEEEEECC RGERLSRSGAFVMDTNGYLVTPQGFPLMGENGPIRVARGNFLIKENGEVWINGEIGNDPR CCHHHHCCCCEEEECCCEEECCCCCEEECCCCCEEEECCCEEEEECCCEEEECCCCCCCC NGTSLDKNRFETPVLLDRLKIRTVENPRHLDKEGDSFYADTPESGEPTPFELKDEPSILQ CCCCCCHHCCCCHHHHHHHHEEECCCCCCCCCCCCCEECCCCCCCCCCCCCCCCCHHHHH GYLEASNVSVVTEMVEMIEVNRSYEANQKTVQTQDSLLGKLINEVLR HHHHHCCHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 7836311; 9353933; 9384377 [H]