| Definition | Leptospira borgpetersenii serovar Hardjo-bovis L550 chromosome 1, complete sequence. |
|---|---|
| Accession | NC_008508 |
| Length | 3,614,446 |
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The map label for this gene is secA [H]
Identifier: 116328434
GI number: 116328434
Start: 2069867
End: 2072581
Strand: Reverse
Name: secA [H]
Synonym: LBL_1776
Alternate gene names: 116328434
Gene position: 2072581-2069867 (Counterclockwise)
Preceding gene: 116328435
Following gene: 116328433
Centisome position: 57.34
GC content: 44.71
Gene sequence:
>2715_bases ATGAATATGATTCAGAACATTCTCCGGGTGATCCTCGGAAGTAAATTCGAACGAGACTTAAAGAAACTCATCCCGATTGT CGGACAGATCAATTCTTTGGAAAAAGAAATGAAAGAGACGAGCGATTCTCTACTTTCCTCTCAAACGCAAAAGTTTCGCG AGAGGATCGCTCGGGGAGAATCTTTGGATTCAATTCTTCCCGAAGCCTTTGCGACGGTACGGGAAGTTTCCTTGCGCACG ATGGGAATGAGACATTTCGACGTTCAAATGATGGGAGGAATCGCTCTTCACAGAGGAAATATCGCCGAAATGAAAACCGG GGAAGGTAAGACTTTGACTTCCACTCTCGCGGTTTATCTCAATTCCCTCGCGGGCAAGGGGGTTCATGTAGTCACAGTAA ACGACTATCTCGCAAAGAGGGACGCGAATTGGATGAAGCCGATCTACGACTTCCTCGGGATTTCCGTGGGAGTGATTCAA CACGATATGGATCACGAACAAAGAAAGATCGCTTATTCCGCGGATATTACGTACGGAACTAACAACGAATTCGGTTTTGA TTATCTGAGGGATAACATGGTTTCCCACAAGGATCACAAAGTTCAGAGATCCCATTTTTTCGCAATCGTGGACGAGGTCG ATTCGATTCTGATCGACGAAGCAAGGACTCCTCTGATCATTTCGGGTTCTTCCGACGAGACTACCGATAAATACGTTCGT ATTAATAAGATTATACCTAAGTTGGTCGCAATCGAAGATTTCGAGGTGGATGAAAAGGCGCGTAACGTTCTTCTTTCCGA AAAAGGGGTTTCCCACGTGGAGGAAATTCTAGGGATCGAAAATCTATATGCTCCGGAAAACGTGGACCTTGTGCATCACG TTCACCAGGCTCTAAAAGCGCATAAAATCTTTCAGAAGGACGTGGACTACGTCGTTCAAAACGGAGAGGTTATCATAGTG GACGAATTTACCGGACGTTTGATGGCGGGAAGAAGATATTCCGACGGACTTCATCAAGCTCTTGAAGCCAAGGAAAGTGT TACAATTGCAAAAGAGTCCCAGACTCTCGCTTCGATTACGTTCCAGAATTATTTTAGAATGTACGACAAACTTGCCGGTA TGACGGGAACCGCAGACACGGAAGCGGAGGAATTTAGGAAAATCTACGATCTGGATGTGATTGTAATTCCGCCTAACGTT TCGGTTCGGAGAAAGGATTCCCCCGATCGTGTATATAGAACTGAAAAGGAAAAGTTCGACGCAATTCTTGCCGAAATTCG GGAACTCCAATCCAAAAAACAACCGGTTCTCGTGGGAACGATCTCCATTGAAAAATCGGAGATTCTTTCTAAAATGCTTT CATCCGCGGGAATTCAGCATAACGTATTGAATGCGAAATTTCACGAGCGGGAAGCGGAGATTGTCGCCAATGCGGGAAAA CCGGGAGCGGTTACGATTGCAACGAATATGGCGGGAAGGGGGACCGATATCGTTCTCGGCGGCGCGCAGCTTTATAAAGA GAATCTAGAAACCTGGAAGGACGACGACGATCTTGTCAGGCGGTTTAAGGAGTCGATTTTAAAACAGGAATTGGACAATG CGGAGTTGCTGATTCGGGAAATGGATTCTTCTGTTAAACAAAAACGTGCATCTGAAATTCTCGAGTCTGTCAAGATCTGG AAAAAAAATCACGAAGACGTTTTGGTTGCGGGAGGTCTTCATATCCTCGGAACCGAGAGGCACGAGGCGAGACGAATCGA TAATCAGCTCCGAGGCCGTTCTGGCCGTCAGGGGGATCCTGGCTCCAGTCGTTTTTACTTATCTCTTCAAGACGATCTTA TGAGAATTTTCGGATCGGATCGAATCTCCGGACTTATGAAATGGGCGAATATGCCGGAAGGACAAGAGATAGAAAGTAAA ATGGTGAGTAACGCGATCGCGCGCGCTCAGAAGAGAGTGGAAGGGCATAACTTCGATATCCGGAAACATCTTCTCGAATA CGATGATGTAATGAATCGCCAGCGAATCGTAATCTACAAAATGAGAAACGAGGTTCTCGAAAACGAGGATATCTCTTCTT TGATTTTGAGTTTTATAGAAGAGGCGGTGGAGAATCAGATTGTTGCTCACTGCGAGGGGAATAATCCCTCCAGTTGGAAT TTGGATTCTTTAAAAGAATGGCTGGAAGGTCTTGAGCTGAACTTAGAAATCAACGAAGAAGATTTCAAAAAAACCAAAAA CCCTCAACTCGCTCTTTTTGAAAAAGTGAATGCGGCTGCGAAACAGAAATACGAAGATAGAGCCGAAAGTATCGGTAAGG ATATTTGGAAACTTCTGGAAAGAAATATTTTTTTGGACATCTTAGATCATCGTTGGAAAGAGCATCTTTATTCCATGGAT CATTTGAGAGAAGGAATCTGGACCGTAGGTTATAGCGAAAGAAATCCTCTCGTGGAATATAAACTTCAAGGTTTTAGAAT GTTCGATGTGGCGATCGAGAATTTGAAAAACGAAGTCGTAAACTTTCTTTTTCGTGTGGAAGTATCGGAAAATTCCAAAC TACCGGAAGAAAGGCGGGAATATAAAAAAGTAGGGCAAGAAGTTACTGGAGGATTTCAAGAGCTTTCGAGTGGAACTCCC AGCCCTACGGTAACTGTTACGACCAGTTCGGGAGGAGGGACCGAAAGAAAGACAAGTCGGAGACGAAAGCGCTGA
Upstream 100 bases:
>100_bases CGCTAAGATTTGGAGCGGACTCTGTGCGAACTTCTTTCGGATCGGGTTTGGACTTGATAATCTTAAAAGAAATGATTCAA ATGATAGAATATACGGAAAA
Downstream 100 bases:
>100_bases AGCTTCGTATTATTACGTTTATTTTGGTTTGTGAATTGGGAATTCTGAGTTCCTGTACCACTGCGCCCCAAAAGGAATCG GTGAAACAGATCTACGCCGA
Product: preprotein translocase subunit SecA
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 904; Mature: 904
Protein sequence:
>904_residues MNMIQNILRVILGSKFERDLKKLIPIVGQINSLEKEMKETSDSLLSSQTQKFRERIARGESLDSILPEAFATVREVSLRT MGMRHFDVQMMGGIALHRGNIAEMKTGEGKTLTSTLAVYLNSLAGKGVHVVTVNDYLAKRDANWMKPIYDFLGISVGVIQ HDMDHEQRKIAYSADITYGTNNEFGFDYLRDNMVSHKDHKVQRSHFFAIVDEVDSILIDEARTPLIISGSSDETTDKYVR INKIIPKLVAIEDFEVDEKARNVLLSEKGVSHVEEILGIENLYAPENVDLVHHVHQALKAHKIFQKDVDYVVQNGEVIIV DEFTGRLMAGRRYSDGLHQALEAKESVTIAKESQTLASITFQNYFRMYDKLAGMTGTADTEAEEFRKIYDLDVIVIPPNV SVRRKDSPDRVYRTEKEKFDAILAEIRELQSKKQPVLVGTISIEKSEILSKMLSSAGIQHNVLNAKFHEREAEIVANAGK PGAVTIATNMAGRGTDIVLGGAQLYKENLETWKDDDDLVRRFKESILKQELDNAELLIREMDSSVKQKRASEILESVKIW KKNHEDVLVAGGLHILGTERHEARRIDNQLRGRSGRQGDPGSSRFYLSLQDDLMRIFGSDRISGLMKWANMPEGQEIESK MVSNAIARAQKRVEGHNFDIRKHLLEYDDVMNRQRIVIYKMRNEVLENEDISSLILSFIEEAVENQIVAHCEGNNPSSWN LDSLKEWLEGLELNLEINEEDFKKTKNPQLALFEKVNAAAKQKYEDRAESIGKDIWKLLERNIFLDILDHRWKEHLYSMD HLREGIWTVGYSERNPLVEYKLQGFRMFDVAIENLKNEVVNFLFRVEVSENSKLPEERREYKKVGQEVTGGFQELSSGTP SPTVTVTTSSGGGTERKTSRRRKR
Sequences:
>Translated_904_residues MNMIQNILRVILGSKFERDLKKLIPIVGQINSLEKEMKETSDSLLSSQTQKFRERIARGESLDSILPEAFATVREVSLRT MGMRHFDVQMMGGIALHRGNIAEMKTGEGKTLTSTLAVYLNSLAGKGVHVVTVNDYLAKRDANWMKPIYDFLGISVGVIQ HDMDHEQRKIAYSADITYGTNNEFGFDYLRDNMVSHKDHKVQRSHFFAIVDEVDSILIDEARTPLIISGSSDETTDKYVR INKIIPKLVAIEDFEVDEKARNVLLSEKGVSHVEEILGIENLYAPENVDLVHHVHQALKAHKIFQKDVDYVVQNGEVIIV DEFTGRLMAGRRYSDGLHQALEAKESVTIAKESQTLASITFQNYFRMYDKLAGMTGTADTEAEEFRKIYDLDVIVIPPNV SVRRKDSPDRVYRTEKEKFDAILAEIRELQSKKQPVLVGTISIEKSEILSKMLSSAGIQHNVLNAKFHEREAEIVANAGK PGAVTIATNMAGRGTDIVLGGAQLYKENLETWKDDDDLVRRFKESILKQELDNAELLIREMDSSVKQKRASEILESVKIW KKNHEDVLVAGGLHILGTERHEARRIDNQLRGRSGRQGDPGSSRFYLSLQDDLMRIFGSDRISGLMKWANMPEGQEIESK MVSNAIARAQKRVEGHNFDIRKHLLEYDDVMNRQRIVIYKMRNEVLENEDISSLILSFIEEAVENQIVAHCEGNNPSSWN LDSLKEWLEGLELNLEINEEDFKKTKNPQLALFEKVNAAAKQKYEDRAESIGKDIWKLLERNIFLDILDHRWKEHLYSMD HLREGIWTVGYSERNPLVEYKLQGFRMFDVAIENLKNEVVNFLFRVEVSENSKLPEERREYKKVGQEVTGGFQELSSGTP SPTVTVTTSSGGGTERKTSRRRKR >Mature_904_residues MNMIQNILRVILGSKFERDLKKLIPIVGQINSLEKEMKETSDSLLSSQTQKFRERIARGESLDSILPEAFATVREVSLRT MGMRHFDVQMMGGIALHRGNIAEMKTGEGKTLTSTLAVYLNSLAGKGVHVVTVNDYLAKRDANWMKPIYDFLGISVGVIQ HDMDHEQRKIAYSADITYGTNNEFGFDYLRDNMVSHKDHKVQRSHFFAIVDEVDSILIDEARTPLIISGSSDETTDKYVR INKIIPKLVAIEDFEVDEKARNVLLSEKGVSHVEEILGIENLYAPENVDLVHHVHQALKAHKIFQKDVDYVVQNGEVIIV DEFTGRLMAGRRYSDGLHQALEAKESVTIAKESQTLASITFQNYFRMYDKLAGMTGTADTEAEEFRKIYDLDVIVIPPNV SVRRKDSPDRVYRTEKEKFDAILAEIRELQSKKQPVLVGTISIEKSEILSKMLSSAGIQHNVLNAKFHEREAEIVANAGK PGAVTIATNMAGRGTDIVLGGAQLYKENLETWKDDDDLVRRFKESILKQELDNAELLIREMDSSVKQKRASEILESVKIW KKNHEDVLVAGGLHILGTERHEARRIDNQLRGRSGRQGDPGSSRFYLSLQDDLMRIFGSDRISGLMKWANMPEGQEIESK MVSNAIARAQKRVEGHNFDIRKHLLEYDDVMNRQRIVIYKMRNEVLENEDISSLILSFIEEAVENQIVAHCEGNNPSSWN LDSLKEWLEGLELNLEINEEDFKKTKNPQLALFEKVNAAAKQKYEDRAESIGKDIWKLLERNIFLDILDHRWKEHLYSMD HLREGIWTVGYSERNPLVEYKLQGFRMFDVAIENLKNEVVNFLFRVEVSENSKLPEERREYKKVGQEVTGGFQELSSGTP SPTVTVTTSSGGGTERKTSRRRKR
Specific function: Part of the Sec protein translocase complex. Interacts with the secYEG preprotein conducting channel. Has a central role in coupling the hydrolysis of ATP to the transfer of proteins into and across the cell membrane, serving as an ATP-driven molecular mo
COG id: COG0653
COG function: function code U; Preprotein translocase subunit SecA (ATPase, RNA helicase)
Gene ontology:
Cell location: Cell inner membrane; Peripheral membrane protein; Cytoplasmic side. Cytoplasm (By similarity). Note=Distribution is 50-50 (By similarity) [H]
Metaboloic importance: Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the secA family [H]
Homologues:
Organism=Escherichia coli, GI1786287, Length=901, Percent_Identity=51.6093229744728, Blast_Score=871, Evalue=0.0,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR000185 - InterPro: IPR020937 - InterPro: IPR011115 - InterPro: IPR014018 - InterPro: IPR011130 - InterPro: IPR011116 [H]
Pfam domain/function: PF07517 SecA_DEAD; PF01043 SecA_PP_bind; PF07516 SecA_SW [H]
EC number: NA
Molecular weight: Translated: 103116; Mature: 103116
Theoretical pI: Translated: 6.24; Mature: 6.24
Prosite motif: PS01312 SECA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.1 %Cys (Translated Protein) 2.8 %Met (Translated Protein) 2.9 %Cys+Met (Translated Protein) 0.1 %Cys (Mature Protein) 2.8 %Met (Mature Protein) 2.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MNMIQNILRVILGSKFERDLKKLIPIVGQINSLEKEMKETSDSLLSSQTQKFRERIARGE CCHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC SLDSILPEAFATVREVSLRTMGMRHFDVQMMGGIALHRGNIAEMKTGEGKTLTSTLAVYL CHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHCCEEEECCCCCCCCCCCCCHHHHHHHHHH NSLAGKGVHVVTVNDYLAKRDANWMKPIYDFLGISVGVIQHDMDHEQRKIAYSADITYGT HHHCCCCEEEEEECHHHHHCCCHHHHHHHHHHCCHHHHHHHCCCHHHHHEEEEEEEEECC NNEFGFDYLRDNMVSHKDHKVQRSHFFAIVDEVDSILIDEARTPLIISGSSDETTDKYVR CCCCCHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEECCCCCCHHHHHH INKIIPKLVAIEDFEVDEKARNVLLSEKGVSHVEEILGIENLYAPENVDLVHHVHQALKA HHHHHHHHHEECCCCCCHHHHHHHHHHCCHHHHHHHHCHHHCCCCCCHHHHHHHHHHHHH HKIFQKDVDYVVQNGEVIIVDEFTGRLMAGRRYSDGLHQALEAKESVTIAKESQTLASIT HHHHHHHHHHHCCCCCEEEEECCCCHHHCCCCHHHHHHHHHHHHHHEEEECCCHHHHHHH FQNYFRMYDKLAGMTGTADTEAEEFRKIYDLDVIVIPPNVSVRRKDSPDRVYRTEKEKFD HHHHHHHHHHHCCCCCCCCCCHHHHHHHHCCEEEEECCCCCEECCCCCHHHHHHHHHHHH AILAEIRELQSKKQPVLVGTISIEKSEILSKMLSSAGIQHNVLNAKFHEREAEIVANAGK HHHHHHHHHHHCCCCEEEEEEECCHHHHHHHHHHHCCCCCCHHCCHHHHHHHHHHCCCCC PGAVTIATNMAGRGTDIVLGGAQLYKENLETWKDDDDLVRRFKESILKQELDNAELLIRE CCEEEEEECCCCCCCEEEECHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHCCCHHHHHHH MDSSVKQKRASEILESVKIWKKNHEDVLVAGGLHILGTERHEARRIDNQLRGRSGRQGDP HHHHHHHHHHHHHHHHHHHHHCCCCCEEEECCEEEEECCHHHHHHHHHHHCCCCCCCCCC GSSRFYLSLQDDLMRIFGSDRISGLMKWANMPEGQEIESKMVSNAIARAQKRVEGHNFDI CCCEEEEEEHHHHHHHHCCHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHCCCCHHH RKHLLEYDDVMNRQRIVIYKMRNEVLENEDISSLILSFIEEAVENQIVAHCEGNNPSSWN HHHHHHHHHHCCCCEEEEEEHHHHHHCCCCHHHHHHHHHHHHHHCCEEEEECCCCCCCCC LDSLKEWLEGLELNLEINEEDFKKTKNPQLALFEKVNAAAKQKYEDRAESIGKDIWKLLE HHHHHHHHCCCEEEEEECHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH RNIFLDILDHRWKEHLYSMDHLREGIWTVGYSERNPLVEYKLQGFRMFDVAIENLKNEVV HHHHHHHHHHHHHHHHHHHHHHHCCCEECCCCCCCCCEEEHHCCCHHHHHHHHHHHHHHH NFLFRVEVSENSKLPEERREYKKVGQEVTGGFQELSSGTPSPTVTVTTSSGGGTERKTSR HHHEEEEECCCCCCCHHHHHHHHHHHHHHCCHHHHHCCCCCCEEEEEECCCCCCCHHHHH RRKR HCCC >Mature Secondary Structure MNMIQNILRVILGSKFERDLKKLIPIVGQINSLEKEMKETSDSLLSSQTQKFRERIARGE CCHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC SLDSILPEAFATVREVSLRTMGMRHFDVQMMGGIALHRGNIAEMKTGEGKTLTSTLAVYL CHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHCCEEEECCCCCCCCCCCCCHHHHHHHHHH NSLAGKGVHVVTVNDYLAKRDANWMKPIYDFLGISVGVIQHDMDHEQRKIAYSADITYGT HHHCCCCEEEEEECHHHHHCCCHHHHHHHHHHCCHHHHHHHCCCHHHHHEEEEEEEEECC NNEFGFDYLRDNMVSHKDHKVQRSHFFAIVDEVDSILIDEARTPLIISGSSDETTDKYVR CCCCCHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEECCCCCCHHHHHH INKIIPKLVAIEDFEVDEKARNVLLSEKGVSHVEEILGIENLYAPENVDLVHHVHQALKA HHHHHHHHHEECCCCCCHHHHHHHHHHCCHHHHHHHHCHHHCCCCCCHHHHHHHHHHHHH HKIFQKDVDYVVQNGEVIIVDEFTGRLMAGRRYSDGLHQALEAKESVTIAKESQTLASIT HHHHHHHHHHHCCCCCEEEEECCCCHHHCCCCHHHHHHHHHHHHHHEEEECCCHHHHHHH FQNYFRMYDKLAGMTGTADTEAEEFRKIYDLDVIVIPPNVSVRRKDSPDRVYRTEKEKFD HHHHHHHHHHHCCCCCCCCCCHHHHHHHHCCEEEEECCCCCEECCCCCHHHHHHHHHHHH AILAEIRELQSKKQPVLVGTISIEKSEILSKMLSSAGIQHNVLNAKFHEREAEIVANAGK HHHHHHHHHHHCCCCEEEEEEECCHHHHHHHHHHHCCCCCCHHCCHHHHHHHHHHCCCCC PGAVTIATNMAGRGTDIVLGGAQLYKENLETWKDDDDLVRRFKESILKQELDNAELLIRE CCEEEEEECCCCCCCEEEECHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHCCCHHHHHHH MDSSVKQKRASEILESVKIWKKNHEDVLVAGGLHILGTERHEARRIDNQLRGRSGRQGDP HHHHHHHHHHHHHHHHHHHHHCCCCCEEEECCEEEEECCHHHHHHHHHHHCCCCCCCCCC GSSRFYLSLQDDLMRIFGSDRISGLMKWANMPEGQEIESKMVSNAIARAQKRVEGHNFDI CCCEEEEEEHHHHHHHHCCHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHCCCCHHH RKHLLEYDDVMNRQRIVIYKMRNEVLENEDISSLILSFIEEAVENQIVAHCEGNNPSSWN HHHHHHHHHHCCCCEEEEEEHHHHHHCCCCHHHHHHHHHHHHHHCCEEEEECCCCCCCCC LDSLKEWLEGLELNLEINEEDFKKTKNPQLALFEKVNAAAKQKYEDRAESIGKDIWKLLE HHHHHHHHCCCEEEEEECHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH RNIFLDILDHRWKEHLYSMDHLREGIWTVGYSERNPLVEYKLQGFRMFDVAIENLKNEVV HHHHHHHHHHHHHHHHHHHHHHHCCCEECCCCCCCCCEEEHHCCCHHHHHHHHHHHHHHH NFLFRVEVSENSKLPEERREYKKVGQEVTGGFQELSSGTPSPTVTVTTSSGGGTERKTSR HHHEEEEECCCCCCCHHHHHHHHHHHHHHCCHHHHHCCCCCCEEEEEECCCCCCCHHHHH RRKR HCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 6.0
TargetDB status: NA
Availability: NA
References: NA