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The map label for this gene is 116328397

Identifier: 116328397

GI number: 116328397

Start: 2021195

End: 2021548

Strand: Reverse

Name: 116328397

Synonym: LBL_1734

Alternate gene names: NA

Gene position: 2021548-2021195 (Counterclockwise)

Preceding gene: 116328408

Following gene: 116328396

Centisome position: 55.93

GC content: 39.55

Gene sequence:

>354_bases
ATGATTTTAAACGAAATCATCATTTCTACGGAAAAAATCGACAACGTTCAGGTTATAAAACTTCAGGGTTCCATCAACTC
ATTTACCGAAAAAAAATTCAGAGATCAGCTTTCGGTTTCGATCCGTTCCGGTCCCGTGATTTTGGATCTGGAAGAAGTCA
GTTTGATTTCTTCCCGTGGAATTCAATCTTTGAAGGAAATGAATCAGCTGAGTTTTACTTCACGCAACAAATTGGTACTG
ATTCATCCTACTGAATCGGTTCGGAAGGCGATCAAAATGGCGGCACTCAACGGACTTTTTTTGATTGCTCCGGATGAAGA
ATCCGCTTTGAAAATGACGATGAAAAATAGGTAG

Upstream 100 bases:

>100_bases
AAAAAAGAATAGGATTTTAAAATTAAAAATAGAATGGATAAGAATAGAAAAACCATTTGTCTTCGGGAAGAAATACTTAT
AGGCTGACTTTCCAAGCATC

Downstream 100 bases:

>100_bases
GATATAAGTGGAAAATTTGATTCGGTTTAATTATGTGCGTAAACTCTGGCATCTTCTCGGGTTGATCTTTCCTGTCTGTT
ACTATTTGGATGTTTTTCAA

Product: anti-sigma factor antagonist

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 117; Mature: 117

Protein sequence:

>117_residues
MILNEIIISTEKIDNVQVIKLQGSINSFTEKKFRDQLSVSIRSGPVILDLEEVSLISSRGIQSLKEMNQLSFTSRNKLVL
IHPTESVRKAIKMAALNGLFLIAPDEESALKMTMKNR

Sequences:

>Translated_117_residues
MILNEIIISTEKIDNVQVIKLQGSINSFTEKKFRDQLSVSIRSGPVILDLEEVSLISSRGIQSLKEMNQLSFTSRNKLVL
IHPTESVRKAIKMAALNGLFLIAPDEESALKMTMKNR
>Mature_117_residues
MILNEIIISTEKIDNVQVIKLQGSINSFTEKKFRDQLSVSIRSGPVILDLEEVSLISSRGIQSLKEMNQLSFTSRNKLVL
IHPTESVRKAIKMAALNGLFLIAPDEESALKMTMKNR

Specific function: Unknown

COG id: COG1366

COG function: function code T; Anti-anti-sigma regulatory factor (antagonist of anti-sigma factor)

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 13143; Mature: 13143

Theoretical pI: Translated: 10.20; Mature: 10.20

Prosite motif: PS50801 STAS

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
4.3 %Met     (Translated Protein)
4.3 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
4.3 %Met     (Mature Protein)
4.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MILNEIIISTEKIDNVQVIKLQGSINSFTEKKFRDQLSVSIRSGPVILDLEEVSLISSRG
CCCHHEEEECCCCCCEEEEEEECCCCHHHHHHHHHHHEEEECCCCEEEEHHHHHHHHHCC
IQSLKEMNQLSFTSRNKLVLIHPTESVRKAIKMAALNGLFLIAPDEESALKMTMKNR
HHHHHHHHHCCCCCCCCEEEEECCHHHHHHHHHHHHCCEEEEECCCCCCEEEEECCC
>Mature Secondary Structure
MILNEIIISTEKIDNVQVIKLQGSINSFTEKKFRDQLSVSIRSGPVILDLEEVSLISSRG
CCCHHEEEECCCCCCEEEEEEECCCCHHHHHHHHHHHEEEECCCCEEEEHHHHHHHHHCC
IQSLKEMNQLSFTSRNKLVLIHPTESVRKAIKMAALNGLFLIAPDEESALKMTMKNR
HHHHHHHHHCCCCCCCCEEEEECCHHHHHHHHHHHHCCEEEEECCCCCCEEEEECCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA