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The map label for this gene is napH [H]

Identifier: 116328365

GI number: 116328365

Start: 1982176

End: 1983516

Strand: Direct

Name: napH [H]

Synonym: LBL_1702

Alternate gene names: 116328365

Gene position: 1982176-1983516 (Clockwise)

Preceding gene: 116328364

Following gene: 116328366

Centisome position: 54.84

GC content: 40.94

Gene sequence:

>1341_bases
GTGGTCATCTCCAGACATATTTCCGGTAAAATTCGTTCCGCAAGATATCTTGTGGAAGCGATATTAGTTCCCTTTTATCT
TTTTCTTCCTTGGTTACGTTGGGAAGAACATCCTTTGATCCGACTTGACATTCCCGGAAGAAAATTTTATCTACTCGGAA
ACATTTTCACACCTCAAGAAGGTTTCTATCTTCATCTTTTTCTTATCGGAATGGGTTTATCCCTTTTTTTCTTTACGGCA
TTGATCGGAAGAGTCTGGTGCGGTTGGGCCTGTCCTCAAACCGTGTTTACGGATCTTTTCGATTTCATCGGAAGAACAAT
TCTCGGTTCCAAGTATGGAAAAAAAGACGCTCCTCTCTTCGGAAAGATTCTTGTTCATAAACTGTGGATTTTTCTCAGCT
TACTAGGAGCTCTTGCTTGGGTCTCTTATTTTGCGGATCCGTATGAAATGATAAGCGACATTCTCTCCTCCTCCTTTTTG
ACGAATCCTCCCACTTGGATTTATTTTACATTGTTTTTTACCGCGACTTTGTATCTTGATATGGCGTTCGTAAGAGAACA
ATTTTGCAAATATGCCTGTCCTTATGCGAGATTTCAGACCGTGATGATGGACGCGGATTCCATCAATGTCACCTACGACT
TCAAAAGAGGGGAACCGAGGCGAAAGGCGAAAATTCAAATTGGAGATTGTACGGCATGTAATCTTTGTTTGGTGGTCTGT
CCCACCGGAATTGATATCCGAGAAGGAGTAAACATAGGTTGCATCTCCTGTGGCAAATGCGTGGACGCATGCACAAAAAC
CATGGGTAAAGAAGGCAAGAAAACCTTAATCGGGTATATGTCCGAAAATCAGGCCAATGATCCGAAAAATAAGATCCGTT
GGATACGACCCAGGAGTTTTATTTACGGAATCTTACTTCTTTGTGTTTTAATAACTTCCGTCATTCTACTCTACAACAGA
ATCCCACTCTACGCGAATATTCTTCCCGATAGAATCGTCCAACCGATGGAAATTCCGGGAGAAATCGTAAGAAACTTTTA
CAACGCTCAACTTTCGAATATGACGTTTGAAAATAGACTTCTAAACGTTTCCGTGGAGGAAAGTACTCTTCCTTCTCCAA
TTCGAATTCTTTTGGGAGGAACCCAAACTCCTTCCGTTGAAATCCAAGCCAACAGCGTACAAGACTTTAGAATCATCTTG
GAAACGACCTTAAAATCCTCGAACCGTTCCCAATCCCAAACCTCCCATCAGATTACTTTAAAAATTACCGATTCAAAAAA
CAAAAACTATCAGCTGAAAAAAACGATTCCGTTTCGGATTCCCATTTCGATTCAAAACTAA

Upstream 100 bases:

>100_bases
CCCCCGCACGAAAACTCTCTCGGTTCCGAAAAAGTGTATCAAGTGATGGCTTGGATTGCGTCTCAAAACGCAAGTCTCAA
AGCGGTCCGTTAAGTTTTTT

Downstream 100 bases:

>100_bases
AGGAAAAACTCATGGCCCTTCATAAAAGTATGAAACTCGCATTCACTTGGATCTGGATCGCATTCATTGCATTGATCTCC
GCAACCGCAGTTACGATTCG

Product: polyferredoxin

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 446; Mature: 446

Protein sequence:

>446_residues
MVISRHISGKIRSARYLVEAILVPFYLFLPWLRWEEHPLIRLDIPGRKFYLLGNIFTPQEGFYLHLFLIGMGLSLFFFTA
LIGRVWCGWACPQTVFTDLFDFIGRTILGSKYGKKDAPLFGKILVHKLWIFLSLLGALAWVSYFADPYEMISDILSSSFL
TNPPTWIYFTLFFTATLYLDMAFVREQFCKYACPYARFQTVMMDADSINVTYDFKRGEPRRKAKIQIGDCTACNLCLVVC
PTGIDIREGVNIGCISCGKCVDACTKTMGKEGKKTLIGYMSENQANDPKNKIRWIRPRSFIYGILLLCVLITSVILLYNR
IPLYANILPDRIVQPMEIPGEIVRNFYNAQLSNMTFENRLLNVSVEESTLPSPIRILLGGTQTPSVEIQANSVQDFRIIL
ETTLKSSNRSQSQTSHQITLKITDSKNKNYQLKKTIPFRIPISIQN

Sequences:

>Translated_446_residues
MVISRHISGKIRSARYLVEAILVPFYLFLPWLRWEEHPLIRLDIPGRKFYLLGNIFTPQEGFYLHLFLIGMGLSLFFFTA
LIGRVWCGWACPQTVFTDLFDFIGRTILGSKYGKKDAPLFGKILVHKLWIFLSLLGALAWVSYFADPYEMISDILSSSFL
TNPPTWIYFTLFFTATLYLDMAFVREQFCKYACPYARFQTVMMDADSINVTYDFKRGEPRRKAKIQIGDCTACNLCLVVC
PTGIDIREGVNIGCISCGKCVDACTKTMGKEGKKTLIGYMSENQANDPKNKIRWIRPRSFIYGILLLCVLITSVILLYNR
IPLYANILPDRIVQPMEIPGEIVRNFYNAQLSNMTFENRLLNVSVEESTLPSPIRILLGGTQTPSVEIQANSVQDFRIIL
ETTLKSSNRSQSQTSHQITLKITDSKNKNYQLKKTIPFRIPISIQN
>Mature_446_residues
MVISRHISGKIRSARYLVEAILVPFYLFLPWLRWEEHPLIRLDIPGRKFYLLGNIFTPQEGFYLHLFLIGMGLSLFFFTA
LIGRVWCGWACPQTVFTDLFDFIGRTILGSKYGKKDAPLFGKILVHKLWIFLSLLGALAWVSYFADPYEMISDILSSSFL
TNPPTWIYFTLFFTATLYLDMAFVREQFCKYACPYARFQTVMMDADSINVTYDFKRGEPRRKAKIQIGDCTACNLCLVVC
PTGIDIREGVNIGCISCGKCVDACTKTMGKEGKKTLIGYMSENQANDPKNKIRWIRPRSFIYGILLLCVLITSVILLYNR
IPLYANILPDRIVQPMEIPGEIVRNFYNAQLSNMTFENRLLNVSVEESTLPSPIRILLGGTQTPSVEIQANSVQDFRIIL
ETTLKSSNRSQSQTSHQITLKITDSKNKNYQLKKTIPFRIPISIQN

Specific function: Predicted to be involved in a redox process [H]

COG id: COG0348

COG function: function code C; Polyferredoxin

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 2 4Fe-4S ferredoxin-type domains [H]

Homologues:

Organism=Escherichia coli, GI1787226, Length=200, Percent_Identity=25.5, Blast_Score=65, Evalue=6e-12,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR017896
- InterPro:   IPR017900
- InterPro:   IPR014116
- InterPro:   IPR012285
- InterPro:   IPR013783 [H]

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 51006; Mature: 51006

Theoretical pI: Translated: 9.27; Mature: 9.27

Prosite motif: PS00198 4FE4S_FERREDOXIN

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.9 %Cys     (Translated Protein)
2.2 %Met     (Translated Protein)
5.2 %Cys+Met (Translated Protein)
2.9 %Cys     (Mature Protein)
2.2 %Met     (Mature Protein)
5.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MVISRHISGKIRSARYLVEAILVPFYLFLPWLRWEEHPLIRLDIPGRKFYLLGNIFTPQE
CEECCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEECCCCEEEEEECEECCCC
GFYLHLFLIGMGLSLFFFTALIGRVWCGWACPQTVFTDLFDFIGRTILGSKYGKKDAPLF
CCEEEHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHCCCCCCCCCCHH
GKILVHKLWIFLSLLGALAWVSYFADPYEMISDILSSSFLTNPPTWIYFTLFFTATLYLD
HHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHH
MAFVREQFCKYACPYARFQTVMMDADSINVTYDFKRGEPRRKAKIQIGDCTACNLCLVVC
HHHHHHHHHHHCCCHHHHHHHEEECCCEEEEEEECCCCCCCCCEEEECCCCHHCEEEEEC
PTGIDIREGVNIGCISCGKCVDACTKTMGKEGKKTLIGYMSENQANDPKNKIRWIRPRSF
CCCCCHHCCCCCCEEEHHHHHHHHHHHHCCCCCEEEEEEECCCCCCCCHHHEEEECHHHH
IYGILLLCVLITSVILLYNRIPLYANILPDRIVQPMEIPGEIVRNFYNAQLSNMTFENRL
HHHHHHHHHHHHHHHHHHCCCCHHHHCCHHHCCCCCCCCHHHHHHHHHHHHHCCCHHCEE
LNVSVEESTLPSPIRILLGGTQTPSVEIQANSVQDFRIILETTLKSSNRSQSQTSHQITL
EEEEECCCCCCCCEEEEECCCCCCEEEEEECCCHHHHHHHHHHHCCCCCCCCCCCEEEEE
KITDSKNKNYQLKKTIPFRIPISIQN
EEECCCCCCEEEEEECCEEEEEEECC
>Mature Secondary Structure
MVISRHISGKIRSARYLVEAILVPFYLFLPWLRWEEHPLIRLDIPGRKFYLLGNIFTPQE
CEECCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEECCCCEEEEEECEECCCC
GFYLHLFLIGMGLSLFFFTALIGRVWCGWACPQTVFTDLFDFIGRTILGSKYGKKDAPLF
CCEEEHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHCCCCCCCCCCHH
GKILVHKLWIFLSLLGALAWVSYFADPYEMISDILSSSFLTNPPTWIYFTLFFTATLYLD
HHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHH
MAFVREQFCKYACPYARFQTVMMDADSINVTYDFKRGEPRRKAKIQIGDCTACNLCLVVC
HHHHHHHHHHHCCCHHHHHHHEEECCCEEEEEEECCCCCCCCCEEEECCCCHHCEEEEEC
PTGIDIREGVNIGCISCGKCVDACTKTMGKEGKKTLIGYMSENQANDPKNKIRWIRPRSF
CCCCCHHCCCCCCEEEHHHHHHHHHHHHCCCCCEEEEEEECCCCCCCCHHHEEEECHHHH
IYGILLLCVLITSVILLYNRIPLYANILPDRIVQPMEIPGEIVRNFYNAQLSNMTFENRL
HHHHHHHHHHHHHHHHHHCCCCHHHHCCHHHCCCCCCCCHHHHHHHHHHHHHCCCHHCEE
LNVSVEESTLPSPIRILLGGTQTPSVEIQANSVQDFRIILETTLKSSNRSQSQTSHQITL
EEEEECCCCCCCCEEEEECCCCCCEEEEEECCCHHHHHHHHHHHCCCCCCCCCCCEEEEE
KITDSKNKNYQLKKTIPFRIPISIQN
EEECCCCCCEEEEEECCEEEEEEECC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: Fe [C]

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 1400197 [H]