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The map label for this gene is ccoN [H]

Identifier: 116328361

GI number: 116328361

Start: 1979358

End: 1980788

Strand: Direct

Name: ccoN [H]

Synonym: LBL_1698

Alternate gene names: 116328361

Gene position: 1979358-1980788 (Clockwise)

Preceding gene: 116328360

Following gene: 116328362

Centisome position: 54.76

GC content: 43.82

Gene sequence:

>1431_bases
ATGGGTCAAACGAACACCAAATACAACGATTCCATCGTAAAAGGGTTCATTGTCTCGGCTTTAGTCTGGGGAGTCGCTTC
CATGTTGGTGGGAGTTATTGCTGCCTTTCAAATGGTCTATCCCGAATTGAACTTCACTCGATATTTCACTTTCGGTAGAA
TCAGACCCTTACATACCAACGCGGCGATTTTTGGTTTCGCACTGAGCGTCATATTCGCCACAGCCTACCATCTGATTCAA
AGACTGTGCCGGGTAAGAATTTGGAACGATTCCTTAGCAAAAATTCACTTCGTATTATATAATCTAACGATCGTTCTTGC
CGCGATCACTCTTCCTCTAGGACTCAACCAATCCAAGGAATACGCCGAACTAGAATGGCCTTTGGATCTTTTGATCGTGG
TTTGGTTCGTGATATTTCTCGTGAATTTCCTAGCGACTATTTTTACAAGAGAGGAAAAACAACTCTACGCGGCGATCTGG
TTCTACATTGCTTCTTTCGTCACCATCCCGATTCTTTTTGTAGTCAATAATCTTTCGATTCCTGTTAGTCTTTCCAAGTC
CTACTCGATTTTTTCCGGAGTCTACGACGCAAATATTCAGTGGTGGTACGGTCACAACGCGGTAGCATTCGTCTTAACAA
CCCCGTTCTTAGGTTTGATGTATTACTATTTTCCGAAACACATCAAACAACCTATCTATAGTCATAGATTGTCTATCATT
CATTTCTGGTCTTTGATTTTCATTTATATCTGGGCCGGTCCTCATCACTTGCTGAACACCCCTCTTCCCGAATGGCTTCA
AACCACCGGGATGGCTTTTTCCATCATGCTCTGGATGCCTTCTTGGGGAGGAATGCTCAATGGATTCCTAACGTTAACTC
AAGCGAAGGAAAAGATCAAAACCGACGCTATTTTAAAGATGATGCTTGTAGGGATCACATTCTACGGTATGTCTACCTTC
GAAGGCCCTCTCCTTTCTATTCGTTCGATCAGCGCCCTCGGTCACAACACCGATTGGATCATAGGTCACGTTCATTCCGG
AACCTTGGGCTGGGTGGGAATGATGTCTTTCGCCGCGATTTATTATCTCGTTCCTAGAATGTGGAATACTAATCTTTATT
CGGAAAAACTCGCGAACGTGCATTTCTGGTTTGCGACTTTAGGAATTCTTCTCTATATCGTTTCAATGTGGGTTTCCGGT
ATCACAGAAGGTTCTATGTGGAGAGCGATTGATTCCAAAGGATTTCTACAGTATCCGGCTTGGGTTCAAATCACCGAGGT
ATTAAAACCCTTTCGTCTTGCGAGAGGGGTTGCCGGCGCTATTTATCTGAGCGGCGTCTTCGTCATGCTCTATAATGTGA
TCAAAACAATTCAAAACTCCGGTTCCGGTTTTCAAGAAGTCGATTTGAGAGTGAAAGGAGAAAACGCATGA

Upstream 100 bases:

>100_bases
AAAAATAATATTCAAATTTACTGAAATAGGATATATTTTATTGACTTTTTTCCATTGTAAACGAAATGAACAAAAGATTC
GAATCAGGAGATACAATTTC

Downstream 100 bases:

>100_bases
AACTTTTCGACGTTCTTTTGACTTGGTTTTCAGGGTTTACGGAAAAATGGGAAAAACAAGGAGTTAAATTCACCATTTAT
ACGACAATCGCCGTATTGAT

Product: cbb3-type cytochrome c oxidase subunit I

Products: NA

Alternate protein names: Cytochrome CBB3 subunit 1; Cytochrome c oxidase polypeptide I homolog; Heme B/copper cytochrome c oxidase subunit [H]

Number of amino acids: Translated: 476; Mature: 475

Protein sequence:

>476_residues
MGQTNTKYNDSIVKGFIVSALVWGVASMLVGVIAAFQMVYPELNFTRYFTFGRIRPLHTNAAIFGFALSVIFATAYHLIQ
RLCRVRIWNDSLAKIHFVLYNLTIVLAAITLPLGLNQSKEYAELEWPLDLLIVVWFVIFLVNFLATIFTREEKQLYAAIW
FYIASFVTIPILFVVNNLSIPVSLSKSYSIFSGVYDANIQWWYGHNAVAFVLTTPFLGLMYYYFPKHIKQPIYSHRLSII
HFWSLIFIYIWAGPHHLLNTPLPEWLQTTGMAFSIMLWMPSWGGMLNGFLTLTQAKEKIKTDAILKMMLVGITFYGMSTF
EGPLLSIRSISALGHNTDWIIGHVHSGTLGWVGMMSFAAIYYLVPRMWNTNLYSEKLANVHFWFATLGILLYIVSMWVSG
ITEGSMWRAIDSKGFLQYPAWVQITEVLKPFRLARGVAGAIYLSGVFVMLYNVIKTIQNSGSGFQEVDLRVKGENA

Sequences:

>Translated_476_residues
MGQTNTKYNDSIVKGFIVSALVWGVASMLVGVIAAFQMVYPELNFTRYFTFGRIRPLHTNAAIFGFALSVIFATAYHLIQ
RLCRVRIWNDSLAKIHFVLYNLTIVLAAITLPLGLNQSKEYAELEWPLDLLIVVWFVIFLVNFLATIFTREEKQLYAAIW
FYIASFVTIPILFVVNNLSIPVSLSKSYSIFSGVYDANIQWWYGHNAVAFVLTTPFLGLMYYYFPKHIKQPIYSHRLSII
HFWSLIFIYIWAGPHHLLNTPLPEWLQTTGMAFSIMLWMPSWGGMLNGFLTLTQAKEKIKTDAILKMMLVGITFYGMSTF
EGPLLSIRSISALGHNTDWIIGHVHSGTLGWVGMMSFAAIYYLVPRMWNTNLYSEKLANVHFWFATLGILLYIVSMWVSG
ITEGSMWRAIDSKGFLQYPAWVQITEVLKPFRLARGVAGAIYLSGVFVMLYNVIKTIQNSGSGFQEVDLRVKGENA
>Mature_475_residues
GQTNTKYNDSIVKGFIVSALVWGVASMLVGVIAAFQMVYPELNFTRYFTFGRIRPLHTNAAIFGFALSVIFATAYHLIQR
LCRVRIWNDSLAKIHFVLYNLTIVLAAITLPLGLNQSKEYAELEWPLDLLIVVWFVIFLVNFLATIFTREEKQLYAAIWF
YIASFVTIPILFVVNNLSIPVSLSKSYSIFSGVYDANIQWWYGHNAVAFVLTTPFLGLMYYYFPKHIKQPIYSHRLSIIH
FWSLIFIYIWAGPHHLLNTPLPEWLQTTGMAFSIMLWMPSWGGMLNGFLTLTQAKEKIKTDAILKMMLVGITFYGMSTFE
GPLLSIRSISALGHNTDWIIGHVHSGTLGWVGMMSFAAIYYLVPRMWNTNLYSEKLANVHFWFATLGILLYIVSMWVSGI
TEGSMWRAIDSKGFLQYPAWVQITEVLKPFRLARGVAGAIYLSGVFVMLYNVIKTIQNSGSGFQEVDLRVKGENA

Specific function: Cytochrome c oxidase is the component of the respiratory chain that catalyzes the reduction of oxygen to water. Subunits 1- 3 form the functional core of the enzyme complex. Co I is the catalytic subunit of the enzyme. Electrons originating in cytochrome

COG id: COG3278

COG function: function code O; Cbb3-type cytochrome oxidase, subunit 1

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the heme-copper respiratory oxidase family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR004677
- InterPro:   IPR000883 [H]

Pfam domain/function: PF00115 COX1 [H]

EC number: =1.9.3.1 [H]

Molecular weight: Translated: 54225; Mature: 54093

Theoretical pI: Translated: 9.63; Mature: 9.63

Prosite motif: PS50855 COX1 ; PS00077 COX1_CUB

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.2 %Cys     (Translated Protein)
3.6 %Met     (Translated Protein)
3.8 %Cys+Met (Translated Protein)
0.2 %Cys     (Mature Protein)
3.4 %Met     (Mature Protein)
3.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MGQTNTKYNDSIVKGFIVSALVWGVASMLVGVIAAFQMVYPELNFTRYFTFGRIRPLHTN
CCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEECCCCEECCCC
AAIFGFALSVIFATAYHLIQRLCRVRIWNDSLAKIHFVLYNLTIVLAAITLPLGLNQSKE
HHHHHHHHHHHHHHHHHHHHHHHHHEECCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCC
YAELEWPLDLLIVVWFVIFLVNFLATIFTREEKQLYAAIWFYIASFVTIPILFVVNNLSI
CHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCE
PVSLSKSYSIFSGVYDANIQWWYGHNAVAFVLTTPFLGLMYYYFPKHIKQPIYSHRLSII
EEEECCCHHHHHCEEECCEEEEECCCEEEEHHHHHHHHHHHHHHHHHHHCHHHHHHHHHH
HFWSLIFIYIWAGPHHLLNTPLPEWLQTTGMAFSIMLWMPSWGGMLNGFLTLTQAKEKIK
HHHHHHHHHHHCCCHHHHCCCCHHHHHHCCCCEEEEEECCCCCHHHHHHHHHHHHHHHHH
TDAILKMMLVGITFYGMSTFEGPLLSIRSISALGHNTDWIIGHVHSGTLGWVGMMSFAAI
HHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHCCCCCCEEEEEECCCCHHHHHHHHHHHH
YYLVPRMWNTNLYSEKLANVHFWFATLGILLYIVSMWVSGITEGSMWRAIDSKGFLQYPA
HHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHEECCCCCCCCCH
WVQITEVLKPFRLARGVAGAIYLSGVFVMLYNVIKTIQNSGSGFQEVDLRVKGENA
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEEEEECCCC
>Mature Secondary Structure 
GQTNTKYNDSIVKGFIVSALVWGVASMLVGVIAAFQMVYPELNFTRYFTFGRIRPLHTN
CCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEECCCCEECCCC
AAIFGFALSVIFATAYHLIQRLCRVRIWNDSLAKIHFVLYNLTIVLAAITLPLGLNQSKE
HHHHHHHHHHHHHHHHHHHHHHHHHEECCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCC
YAELEWPLDLLIVVWFVIFLVNFLATIFTREEKQLYAAIWFYIASFVTIPILFVVNNLSI
CHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCE
PVSLSKSYSIFSGVYDANIQWWYGHNAVAFVLTTPFLGLMYYYFPKHIKQPIYSHRLSII
EEEECCCHHHHHCEEECCEEEEECCCEEEEHHHHHHHHHHHHHHHHHHHCHHHHHHHHHH
HFWSLIFIYIWAGPHHLLNTPLPEWLQTTGMAFSIMLWMPSWGGMLNGFLTLTQAKEKIK
HHHHHHHHHHHCCCHHHHCCCCHHHHHHCCCCEEEEEECCCCCHHHHHHHHHHHHHHHHH
TDAILKMMLVGITFYGMSTFEGPLLSIRSISALGHNTDWIIGHVHSGTLGWVGMMSFAAI
HHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHCCCCCCEEEEEECCCCHHHHHHHHHHHH
YYLVPRMWNTNLYSEKLANVHFWFATLGILLYIVSMWVSGITEGSMWRAIDSKGFLQYPA
HHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHEECCCCCCCCCH
WVQITEVLKPFRLARGVAGAIYLSGVFVMLYNVIKTIQNSGSGFQEVDLRVKGENA
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEEEEECCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 11481432 [H]