| Definition | Leptospira borgpetersenii serovar Hardjo-bovis L550 chromosome 1, complete sequence. |
|---|---|
| Accession | NC_008508 |
| Length | 3,614,446 |
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The map label for this gene is ntrY [H]
Identifier: 116328330
GI number: 116328330
Start: 1946379
End: 1948169
Strand: Reverse
Name: ntrY [H]
Synonym: LBL_1667
Alternate gene names: 116328330
Gene position: 1948169-1946379 (Counterclockwise)
Preceding gene: 116328331
Following gene: 116328329
Centisome position: 53.9
GC content: 38.41
Gene sequence:
>1791_bases ATGAACGATGAAACCAGATATTATCTAAGGGATTTACTTGTCTTGGGTTTGAACATTTTGCTTTCCGTGATTCTTGCTGA AACGTTTCAGTTTTCGGATCAAAACTCCATATCGGACGATATAGGGTTTTTAGACAGAATTGTGGTTTATATCTTCTTTT TTATTCCGCTTTTTTCTCTTTCGCTTCTTATCTCTTATTTTTATAGGAACAAACGTAATTTAGAGACGGGAAGACTCAAG AGTTCCATTAGATATCGTCTAACGTTATCGTTTATCTTCGTCGCGCTTCTTCCCTTATTGCCGATTTTATTTCTCTCCTC CAACGTCACCGGAAAACTCTATGAAAGGTTCTACGGAATCGATATAGAAGAAGCGCTTTTGTCCGGTGAAACCTTGATTT TAAACGAAGAAAAACCTAAAAAAAAATTACTCGTTGAAAAAACGCGTCTTTTGGAAAGTTTTCTGAGAATACAACCCCTC AACTTGGAATCCTTGGTTGCAGGAGCTTCTAAACTCAATCTGATTCAAAGTGACGAGTTCTACGTAGGCATTTACGAGAA TGAAAAACCGATTTTAGAAAATCGCGTTTTGAAATACAAGCCATTGGAAAAAAATTTCAAGTCCTTCTCGAAAAATTCGA GTTGGAGGGAATTTTCAAGTTATCGTCCGGACTATTGTATGTATTTCATCCGAGTTCCGTTTCCCGTTGGAAATTACAAT CTTCAAACAGGGATTAGAATCCATAAAGAAAAGGAGAGGAACGTATATTCCGTGATTTCCACAAGAAGGAATTATGATCG CGCGGATCTAACCAAGGGAAAACTTCCGTATCGAATTCGTCTAACGTTTAGTATTATCACGGTTTCTATTTTTTTACTTG CGATTTATTTTTCCCTTCTTTTTGCGAGAAAAATTTCCAGACCGATCATAGAGTTAGCAAATGCGACTCAAAAAATTTCC ATGGGAGATACGGATATCAATCTCGAAATCCGAGAGGCCGGAGAGATTGGCGCTCTTATCGACTCTTTTAATCAGATGGT TAAGGATCTGAAATCGAAAGACGAGGAGCTTATGCAAAGCCAGAGAATTGCGGCATGGAAGGAAGTCGCTCAGAGAATGG CGCACGAAATCAAGAATCCTCTGACTCCGATTCAACTTTCCGCGGAGAGAATTCGTAGAAAAATGAAATCGGAAAATAAG GAACAATTCTACGAAATCGTTTCAACCGGCACTGATACGATCATCAAACAGGTTCGTGTATTGGAACACCTCGTGAACGA ATTTTCAGATTTTGCCCGTATGCCTACTCCGAAACTAATCAATCAGAACCTGGAACCGATCATTCTTGAGGCTGTAAAAC TTTTCGAACATACTCCGCAAATCAAAATCACAACGAGTATTTCAAAGGGTTTTCCTCAATTATTTTTGGATCAAAAAGTC ATTCTGAGGATTCTCACCAACCTTATTAAAAATTCCATGGAAGCCATCGAAAGAAAACGGGAAAAAGAGGAATTATCCGA TTATATGGGATTGATTTTGATCTCCGCTTCTATGACAAGAAAGATCATGAGAAGAGTTGCGGTGGTTTCAATCGAAGATA ATGGAATCGGAATTTCGGCGGAACTGAAACAAAAAGTTTTTGAACCGTATTACTCGACCAAAAATAGTAATACTTCCGGA ATTGGTTTAGCGATCGTTCAAAAAAGTGTGATTGACCACAATGGTCATATTTCTGTAGATTCTTCTCGTATGGGTGGGTG TCGTTTTCAAATTGAACTTCCCGTATCGTAA
Upstream 100 bases:
>100_bases AATGAATTTAAAATTCAGGTCGAAGGCGAAAAAGAAGACGAAGCCTTGGAGGCTCTCAGTAATATCGTAAACAACGATTT CGTTTAACAAATTCAAATCC
Downstream 100 bases:
>100_bases CCGATCATGAAAATTTTTATCGTCGATGACGAACCCGAAATTAGAAAATCTCTGAGGGAAATCTTAGAAGACGAAAATTT CGAAGTGGAAACTTTTTCCA
Product: sensor histidine kinase of a two component response regulator
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 596; Mature: 596
Protein sequence:
>596_residues MNDETRYYLRDLLVLGLNILLSVILAETFQFSDQNSISDDIGFLDRIVVYIFFFIPLFSLSLLISYFYRNKRNLETGRLK SSIRYRLTLSFIFVALLPLLPILFLSSNVTGKLYERFYGIDIEEALLSGETLILNEEKPKKKLLVEKTRLLESFLRIQPL NLESLVAGASKLNLIQSDEFYVGIYENEKPILENRVLKYKPLEKNFKSFSKNSSWREFSSYRPDYCMYFIRVPFPVGNYN LQTGIRIHKEKERNVYSVISTRRNYDRADLTKGKLPYRIRLTFSIITVSIFLLAIYFSLLFARKISRPIIELANATQKIS MGDTDINLEIREAGEIGALIDSFNQMVKDLKSKDEELMQSQRIAAWKEVAQRMAHEIKNPLTPIQLSAERIRRKMKSENK EQFYEIVSTGTDTIIKQVRVLEHLVNEFSDFARMPTPKLINQNLEPIILEAVKLFEHTPQIKITTSISKGFPQLFLDQKV ILRILTNLIKNSMEAIERKREKEELSDYMGLILISASMTRKIMRRVAVVSIEDNGIGISAELKQKVFEPYYSTKNSNTSG IGLAIVQKSVIDHNGHISVDSSRMGGCRFQIELPVS
Sequences:
>Translated_596_residues MNDETRYYLRDLLVLGLNILLSVILAETFQFSDQNSISDDIGFLDRIVVYIFFFIPLFSLSLLISYFYRNKRNLETGRLK SSIRYRLTLSFIFVALLPLLPILFLSSNVTGKLYERFYGIDIEEALLSGETLILNEEKPKKKLLVEKTRLLESFLRIQPL NLESLVAGASKLNLIQSDEFYVGIYENEKPILENRVLKYKPLEKNFKSFSKNSSWREFSSYRPDYCMYFIRVPFPVGNYN LQTGIRIHKEKERNVYSVISTRRNYDRADLTKGKLPYRIRLTFSIITVSIFLLAIYFSLLFARKISRPIIELANATQKIS MGDTDINLEIREAGEIGALIDSFNQMVKDLKSKDEELMQSQRIAAWKEVAQRMAHEIKNPLTPIQLSAERIRRKMKSENK EQFYEIVSTGTDTIIKQVRVLEHLVNEFSDFARMPTPKLINQNLEPIILEAVKLFEHTPQIKITTSISKGFPQLFLDQKV ILRILTNLIKNSMEAIERKREKEELSDYMGLILISASMTRKIMRRVAVVSIEDNGIGISAELKQKVFEPYYSTKNSNTSG IGLAIVQKSVIDHNGHISVDSSRMGGCRFQIELPVS >Mature_596_residues MNDETRYYLRDLLVLGLNILLSVILAETFQFSDQNSISDDIGFLDRIVVYIFFFIPLFSLSLLISYFYRNKRNLETGRLK SSIRYRLTLSFIFVALLPLLPILFLSSNVTGKLYERFYGIDIEEALLSGETLILNEEKPKKKLLVEKTRLLESFLRIQPL NLESLVAGASKLNLIQSDEFYVGIYENEKPILENRVLKYKPLEKNFKSFSKNSSWREFSSYRPDYCMYFIRVPFPVGNYN LQTGIRIHKEKERNVYSVISTRRNYDRADLTKGKLPYRIRLTFSIITVSIFLLAIYFSLLFARKISRPIIELANATQKIS MGDTDINLEIREAGEIGALIDSFNQMVKDLKSKDEELMQSQRIAAWKEVAQRMAHEIKNPLTPIQLSAERIRRKMKSENK EQFYEIVSTGTDTIIKQVRVLEHLVNEFSDFARMPTPKLINQNLEPIILEAVKLFEHTPQIKITTSISKGFPQLFLDQKV ILRILTNLIKNSMEAIERKREKEELSDYMGLILISASMTRKIMRRVAVVSIEDNGIGISAELKQKVFEPYYSTKNSNTSG IGLAIVQKSVIDHNGHISVDSSRMGGCRFQIELPVS
Specific function: Member of the two-component regulatory system ntrY/ntrX involved in nitrogen level control. Probably activates ntrX by phosphorylation [H]
COG id: COG5000
COG function: function code T; Signal transduction histidine kinase involved in nitrogen fixation and metabolism regulation
Gene ontology:
Cell location: Cell membrane; Multi-pass membrane protein [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Contains 1 PAS (PER-ARNT-SIM) domain [H]
Homologues:
Organism=Escherichia coli, GI1788549, Length=267, Percent_Identity=25.0936329588015, Blast_Score=90, Evalue=3e-19, Organism=Escherichia coli, GI1789808, Length=318, Percent_Identity=25.7861635220126, Blast_Score=88, Evalue=2e-18, Organism=Escherichia coli, GI1790346, Length=309, Percent_Identity=25.2427184466019, Blast_Score=87, Evalue=3e-18, Organism=Escherichia coli, GI1787894, Length=344, Percent_Identity=21.8023255813953, Blast_Score=85, Evalue=2e-17, Organism=Escherichia coli, GI1790436, Length=244, Percent_Identity=26.6393442622951, Blast_Score=82, Evalue=1e-16, Organism=Escherichia coli, GI1788393, Length=305, Percent_Identity=24.2622950819672, Blast_Score=77, Evalue=4e-15, Organism=Escherichia coli, GI1790300, Length=247, Percent_Identity=25.1012145748988, Blast_Score=73, Evalue=4e-14,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR003594 - InterPro: IPR003660 - InterPro: IPR000014 - InterPro: IPR013767 - InterPro: IPR004358 - InterPro: IPR003661 - InterPro: IPR005467 - InterPro: IPR009082 - InterPro: IPR017232 [H]
Pfam domain/function: PF00672 HAMP; PF02518 HATPase_c; PF00512 HisKA; PF00989 PAS [H]
EC number: =2.7.13.3 [H]
Molecular weight: Translated: 68855; Mature: 68855
Theoretical pI: Translated: 9.77; Mature: 9.77
Prosite motif: PS50885 HAMP ; PS50109 HIS_KIN
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.3 %Cys (Translated Protein) 2.2 %Met (Translated Protein) 2.5 %Cys+Met (Translated Protein) 0.3 %Cys (Mature Protein) 2.2 %Met (Mature Protein) 2.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MNDETRYYLRDLLVLGLNILLSVILAETFQFSDQNSISDDIGFLDRIVVYIFFFIPLFSL CCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHH SLLISYFYRNKRNLETGRLKSSIRYRLTLSFIFVALLPLLPILFLSSNVTGKLYERFYGI HHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHCC DIEEALLSGETLILNEEKPKKKLLVEKTRLLESFLRIQPLNLESLVAGASKLNLIQSDEF CHHHHHHCCCEEEECCCCCHHHHHHHHHHHHHHHHHCCCCCHHHHHHCHHHHCEEECCCE YVGIYENEKPILENRVLKYKPLEKNFKSFSKNSSWREFSSYRPDYCMYFIRVPFPVGNYN EEEEECCCCCHHHCCCCCCCCHHHHHHHHCCCCCHHHHHCCCCCCEEEEEEECCCCCCCC LQTGIRIHKEKERNVYSVISTRRNYDRADLTKGKLPYRIRLTFSIITVSIFLLAIYFSLL CCCCCEEECHHHCHHHHHHHHHCCCCHHHCCCCCCCEEEEEHHHHHHHHHHHHHHHHHHH FARKISRPIIELANATQKISMGDTDINLEIREAGEIGALIDSFNQMVKDLKSKDEELMQS HHHHHHHHHHHHHCCHHEEECCCCCEEEEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHH QRIAAWKEVAQRMAHEIKNPLTPIQLSAERIRRKMKSENKEQFYEIVSTGTDTIIKQVRV HHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHCCCHHHHHHHHHCCHHHHHHHHHH LEHLVNEFSDFARMPTPKLINQNLEPIILEAVKLFEHTPQIKITTSISKGFPQLFLDQKV HHHHHHHHHHHHHCCCHHHHCCCCCHHHHHHHHHHHCCCCEEEEECHHCCCHHHHHHHHH ILRILTNLIKNSMEAIERKREKEELSDYMGLILISASMTRKIMRRVAVVSIEDNGIGISA HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEEEECCCCCCCHH ELKQKVFEPYYSTKNSNTSGIGLAIVQKSVIDHNGHISVDSSRMGGCRFQIELPVS HHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHCCCCCEEECCCCCCCEEEEEEECCC >Mature Secondary Structure MNDETRYYLRDLLVLGLNILLSVILAETFQFSDQNSISDDIGFLDRIVVYIFFFIPLFSL CCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHH SLLISYFYRNKRNLETGRLKSSIRYRLTLSFIFVALLPLLPILFLSSNVTGKLYERFYGI HHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHCC DIEEALLSGETLILNEEKPKKKLLVEKTRLLESFLRIQPLNLESLVAGASKLNLIQSDEF CHHHHHHCCCEEEECCCCCHHHHHHHHHHHHHHHHHCCCCCHHHHHHCHHHHCEEECCCE YVGIYENEKPILENRVLKYKPLEKNFKSFSKNSSWREFSSYRPDYCMYFIRVPFPVGNYN EEEEECCCCCHHHCCCCCCCCHHHHHHHHCCCCCHHHHHCCCCCCEEEEEEECCCCCCCC LQTGIRIHKEKERNVYSVISTRRNYDRADLTKGKLPYRIRLTFSIITVSIFLLAIYFSLL CCCCCEEECHHHCHHHHHHHHHCCCCHHHCCCCCCCEEEEEHHHHHHHHHHHHHHHHHHH FARKISRPIIELANATQKISMGDTDINLEIREAGEIGALIDSFNQMVKDLKSKDEELMQS HHHHHHHHHHHHHCCHHEEECCCCCEEEEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHH QRIAAWKEVAQRMAHEIKNPLTPIQLSAERIRRKMKSENKEQFYEIVSTGTDTIIKQVRV HHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHCCCHHHHHHHHHCCHHHHHHHHHH LEHLVNEFSDFARMPTPKLINQNLEPIILEAVKLFEHTPQIKITTSISKGFPQLFLDQKV HHHHHHHHHHHHHCCCHHHHCCCCCHHHHHHHHHHHCCCCEEEEECHHCCCHHHHHHHHH ILRILTNLIKNSMEAIERKREKEELSDYMGLILISASMTRKIMRRVAVVSIEDNGIGISA HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEEEECCCCCCCHH ELKQKVFEPYYSTKNSNTSGIGLAIVQKSVIDHNGHISVDSSRMGGCRFQIELPVS HHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHCCCCCEEECCCCCCCEEEEEEECCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 6.0
TargetDB status: NA
Availability: NA
References: 1661370 [H]