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The map label for this gene is ylqH [H]

Identifier: 116328316

GI number: 116328316

Start: 1935560

End: 1935832

Strand: Reverse

Name: ylqH [H]

Synonym: LBL_1653

Alternate gene names: 116328316

Gene position: 1935832-1935560 (Counterclockwise)

Preceding gene: 116328317

Following gene: 116328315

Centisome position: 53.56

GC content: 41.39

Gene sequence:

>273_bases
ATGATCAGTGTCGCTCTTAAATTCATCCCTCAAAAAGACAACGCACCCGTAATTACTGCATCCGCGTCCGGTCTTTTAGG
TGATGTGATTCGTAAGATTGCGAATAAAAATTCCGTTCCGGTTGTAGAAGACTCGGTACTCGCGGAATCTCTTTTCGAAC
TTCCAGTCGGTTCGGAAATTCCGGAGAATCTTTACAGAGCGGTAGGTGCAATTTTTTCTATGATCTTGGAATTGGATTCA
AATTATTCCGGAAAAAAGGAAATGTTACAATGA

Upstream 100 bases:

>100_bases
AGAAAAATTCAAGAGAGTTTTAAACGAATTATCAGTAGGTCTTCAGGGATATAATTTAGCTTATAAACCCTCTCTGGCTC
GAAAGGAATGGAATGTGTAA

Downstream 100 bases:

>100_bases
AGAAGTTTGCCGTATCCGAATTAAAGCCCGGGATGAGATTCTCAAAACCGGTATACTTAGATAAGGAAAATTTATTTATT
ACTTCCAATACTCCGGTCAC

Product: FhlB-related protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 90; Mature: 90

Protein sequence:

>90_residues
MISVALKFIPQKDNAPVITASASGLLGDVIRKIANKNSVPVVEDSVLAESLFELPVGSEIPENLYRAVGAIFSMILELDS
NYSGKKEMLQ

Sequences:

>Translated_90_residues
MISVALKFIPQKDNAPVITASASGLLGDVIRKIANKNSVPVVEDSVLAESLFELPVGSEIPENLYRAVGAIFSMILELDS
NYSGKKEMLQ
>Mature_90_residues
MISVALKFIPQKDNAPVITASASGLLGDVIRKIANKNSVPVVEDSVLAESLFELPVGSEIPENLYRAVGAIFSMILELDS
NYSGKKEMLQ

Specific function: Required For Formation Of The Rod Structure In The Basal Body Of The Flagellar Apparatus. Together With Flii And Flih, May Constitute The Export Apparatus Of Flagellin. [C]

COG id: COG2257

COG function: function code S; Uncharacterized homolog of the cytoplasmic domain of flagellar protein FhlB

Gene ontology:

Cell location: Integral Membrane Protein. Inner Membrane. [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: 10-20 (rich media) [C]

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR004683
- InterPro:   IPR006135 [H]

Pfam domain/function: PF01312 Bac_export_2 [H]

EC number: NA

Molecular weight: Translated: 9692; Mature: 9692

Theoretical pI: Translated: 4.48; Mature: 4.48

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
3.3 %Met     (Translated Protein)
3.3 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
3.3 %Met     (Mature Protein)
3.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MISVALKFIPQKDNAPVITASASGLLGDVIRKIANKNSVPVVEDSVLAESLFELPVGSEI
CCCEEEEECCCCCCCCEEECCCCHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHCCCCCCC
PENLYRAVGAIFSMILELDSNYSGKKEMLQ
HHHHHHHHHHHHHHHHHHCCCCCCHHHHCC
>Mature Secondary Structure
MISVALKFIPQKDNAPVITASASGLLGDVIRKIANKNSVPVVEDSVLAESLFELPVGSEI
CCCEEEEECCCCCCCCEEECCCCHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHCCCCCCC
PENLYRAVGAIFSMILELDSNYSGKKEMLQ
HHHHHHHHHHHHHHHHHHCCCCCCHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 9384377 [H]